RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 ITGAEP38570 1179 aa12.68□□□□□ -0.38
SKA2-207ENST00000583380 GSE1Q14687 1217 aa12.68□□□□□ -0.38
SKA2-207ENST00000583380 ZMYND15Q9H091 742 aa12.68□□□□□ -0.38
SKA2-207ENST00000583380 NCLP19338 710 aaKnown RBP12.67□□□□□ -0.38
SKA2-207ENST00000583380 RANGAP1P46060 587 aaPredicted RBP12.67□□□□□ -0.38
SKA2-207ENST00000583380 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.67□□□□□ -0.38
SKA2-207ENST00000583380 CENPJQ9HC77 1338 aaPredicted RBP12.63□□□□□ -0.39
SKA2-207ENST00000583380 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
SKA2-207ENST00000583380 PPP1R15AO75807 674 aaPredicted RBP12.62□□□□□ -0.39
SKA2-207ENST00000583380 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
SKA2-207ENST00000583380 MS4A1P11836 297 aa12.61□□□□□ -0.39
SKA2-207ENST00000583380 HSP90AA2PQ14568 343 aaPredicted RBP12.61□□□□□ -0.39
SKA2-207ENST00000583380 ZNF326Q5BKZ1 582 aaKnown RBP12.61□□□□□ -0.39
SKA2-207ENST00000583380 VSIG10Q8N0Z9 540 aa12.61□□□□□ -0.39
SKA2-207ENST00000583380 BAZ1BQ9UIG0 1483 aaKnown RBP12.6□□□□□ -0.39
SKA2-207ENST00000583380 HSP90AA1P07900 732 aaKnown RBP12.59□□□□□ -0.39
SKA2-207ENST00000583380 TCERG1O14776 1098 aaKnown RBP12.58□□□□□ -0.4
SKA2-207ENST00000583380 L1TD1Q5T7N2 865 aaKnown RBP12.58□□□□□ -0.4
SKA2-207ENST00000583380 PAK3O75914 559 aaPredicted RBP12.57□□□□□ -0.4
SKA2-207ENST00000583380 SMARCA2P51531 1590 aa12.55□□□□□ -0.4
SKA2-207ENST00000583380 RTN4Q9NQC3 1192 aaKnown RBP12.54□□□□□ -0.4
SKA2-207ENST00000583380 NACADO15069 1562 aa12.53□□□□□ -0.4
SKA2-207ENST00000583380 MAP7D2Q96T17 732 aa12.53□□□□□ -0.4
SKA2-207ENST00000583380 NCAPD3P42695 1498 aa12.53□□□□□ -0.4
SKA2-207ENST00000583380 KIF21BO75037 1637 aa12.52□□□□□ -0.4
SKA2-207ENST00000583380 CALD1Q05682 793 aaKnown RBP12.52□□□□□ -0.41
SKA2-207ENST00000583380 RRBP1Q9P2E9 1410 aaKnown RBP12.52□□□□□ -0.41
SKA2-207ENST00000583380 FGD1P98174 961 aa12.51□□□□□ -0.41
SKA2-207ENST00000583380 PDE4CQ08493 712 aa12.5□□□□□ -0.41
SKA2-207ENST00000583380 TRIM52Q96A61 297 aa12.5□□□□□ -0.41
SKA2-207ENST00000583380 ZBED9Q6R2W3 1325 aa12.5□□□□□ -0.41
SKA2-207ENST00000583380 EIF4G1Q04637 1599 aaKnown RBP12.49□□□□□ -0.41
SKA2-207ENST00000583380 ARID4BQ4LE39 1312 aaPredicted RBP12.49□□□□□ -0.41
SKA2-207ENST00000583380 PLEKHG5O94827 1062 aa12.49□□□□□ -0.41
SKA2-207ENST00000583380 UBTFP17480 764 aaKnown RBP12.49□□□□□ -0.41
SKA2-207ENST00000583380 DDX10Q13206 875 aaKnown RBP12.49□□□□□ -0.41
SKA2-207ENST00000583380 PDCL3Q9H2J4 239 aa12.49□□□□□ -0.41
SKA2-207ENST00000583380 TPM2P07951 284 aa12.48□□□□□ -0.41
SKA2-207ENST00000583380 HNRNPUQ00839 825 aaKnown RBP eCLIP12.48□□□□□ -0.41
SKA2-207ENST00000583380 CLIP1P30622 1438 aa12.47□□□□□ -0.41
SKA2-207ENST00000583380 MTERF4Q7Z6M4 381 aaKnown RBP12.47□□□□□ -0.41
SKA2-207ENST00000583380 KCNH8Q96L42 1107 aa12.45□□□□□ -0.42
SKA2-207ENST00000583380 PNNQ9H307 717 aaKnown RBP12.45□□□□□ -0.42
SKA2-207ENST00000583380 ISY1Q9ULR0 285 aaKnown RBP12.45□□□□□ -0.42
SKA2-207ENST00000583380 RNF123Q5XPI4 1314 aa12.44□□□□□ -0.42
SKA2-207ENST00000583380 DCAF8L2P0C7V8 631 aa12.44□□□□□ -0.42
SKA2-207ENST00000583380 CLCN1P35523 988 aa12.43□□□□□ -0.42
SKA2-207ENST00000583380 AAMPQ13685 434 aa12.43□□□□□ -0.42
SKA2-207ENST00000583380 TAF7LQ5H9L4 462 aa12.43□□□□□ -0.42
SKA2-207ENST00000583380 BRPF3Q9ULD4 1205 aa12.43□□□□□ -0.42
SKA2-207ENST00000583380 SMG6Q86US8 1419 aaKnown RBP12.43□□□□□ -0.42
SKA2-207ENST00000583380 PDIA4P13667 645 aaKnown RBP12.42□□□□□ -0.42
SKA2-207ENST00000583380 TERF1P54274 439 aa12.41□□□□□ -0.42
SKA2-207ENST00000583380 ARXQ96QS3 562 aa12.4□□□□□ -0.42
SKA2-207ENST00000583380 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
SKA2-207ENST00000583380 RBM10P98175 930 aaKnown RBP12.38□□□□□ -0.43
SKA2-207ENST00000583380 B4GALNT3Q6L9W6 998 aa12.38□□□□□ -0.43
SKA2-207ENST00000583380 EHMT2Q96KQ7 1210 aa12.37□□□□□ -0.43
SKA2-207ENST00000583380 NFKBIBQ15653 356 aa12.36□□□□□ -0.43
SKA2-207ENST00000583380 CCNB3Q8WWL7 1395 aa12.35□□□□□ -0.43
SKA2-207ENST00000583380 BACH2Q9BYV9 841 aa12.35□□□□□ -0.43
SKA2-207ENST00000583380 FHAD1B1AJZ9 1412 aa12.35□□□□□ -0.43
SKA2-207ENST00000583380 PEG3Q9GZU2 1588 aa12.35□□□□□ -0.43
SKA2-207ENST00000583380 FRAT1Q92837 279 aaPredicted RBP12.34□□□□□ -0.43
SKA2-207ENST00000583380 NAP1L5Q96NT1 182 aaPredicted RBP12.34□□□□□ -0.43
SKA2-207ENST00000583380 MAP3K1Q13233 1512 aa12.32□□□□□ -0.44
SKA2-207ENST00000583380 SETD5Q9C0A6 1442 aa12.32□□□□□ -0.44
SKA2-207ENST00000583380 TNNT2P45379 298 aaPredicted RBP12.32□□□□□ -0.44
SKA2-207ENST00000583380 TAF3Q5VWG9 929 aa12.32□□□□□ -0.44
SKA2-207ENST00000583380 PDE4AP27815 886 aa12.31□□□□□ -0.44
SKA2-207ENST00000583380 SMAP1Q8IYB5 467 aaPredicted RBP12.3□□□□□ -0.44
SKA2-207ENST00000583380 NUDCQ9Y266 331 aa12.3□□□□□ -0.44
SKA2-207ENST00000583380 MAPKBP1O60336 1514 aa12.3□□□□□ -0.44
SKA2-207ENST00000583380 WDR97A6NE52 1622 aa12.29□□□□□ -0.44
SKA2-207ENST00000583380 CCDC88BA6NC98 1476 aa12.28□□□□□ -0.44
SKA2-207ENST00000583380 CNGB1Q14028 1251 aaPredicted RBP12.27□□□□□ -0.45
SKA2-207ENST00000583380 UTP14CQ5TAP6 766 aaKnown RBP12.27□□□□□ -0.45
SKA2-207ENST00000583380 LAS1LQ9Y4W2 734 aaKnown RBP12.27□□□□□ -0.45
SKA2-207ENST00000583380 TRIM44Q96DX7 344 aaPredicted RBP12.26□□□□□ -0.45
SKA2-207ENST00000583380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.26□□□□□ -0.454e-8■■■■■ 44
SKA2-207ENST00000583380 NCBP3Q53F19 620 aaKnown RBP12.25□□□□□ -0.45
SKA2-207ENST00000583380 ANP32BQ92688 251 aaKnown RBP12.25□□□□□ -0.45
SKA2-207ENST00000583380 RAB3GAP2Q9H2M9 1393 aa12.25□□□□□ -0.45
SKA2-207ENST00000583380 SOGA1O94964 1423 aa12.24□□□□□ -0.45
SKA2-207ENST00000583380 IRX6P78412 446 aaPredicted RBP12.24□□□□□ -0.45
SKA2-207ENST00000583380 ABCC8Q09428 1581 aa12.24□□□□□ -0.45
SKA2-207ENST00000583380 NCOA2Q15596 1464 aa12.24□□□□□ -0.45
SKA2-207ENST00000583380 ERICH3Q5RHP9 1530 aa12.23□□□□□ -0.45
SKA2-207ENST00000583380 VGFO15240 615 aaPredicted RBP12.23□□□□□ -0.45
SKA2-207ENST00000583380 PTMSP20962 102 aa12.23□□□□□ -0.45
SKA2-207ENST00000583380 CCDC144AA2RUR9 1427 aa12.22□□□□□ -0.45
SKA2-207ENST00000583380 BECN1Q14457 450 aa12.22□□□□□ -0.45
SKA2-207ENST00000583380 CNTLNQ9NXG0 1405 aa12.21□□□□□ -0.45
SKA2-207ENST00000583380 TONSLQ96HA7 1378 aa12.21□□□□□ -0.45
SKA2-207ENST00000583380 PDE3BQ13370 1112 aa12.21□□□□□ -0.45
SKA2-207ENST00000583380 TOP2AP11388 1531 aaKnown RBP12.21□□□□□ -0.46
SKA2-207ENST00000583380 GOLGA6L3A6NEY3 463 aa12.2□□□□□ -0.46
SKA2-207ENST00000583380 MRE11P49959 708 aa12.2□□□□□ -0.46
SKA2-207ENST00000583380 PRDM4Q9UKN5 801 aa12.2□□□□□ -0.46
SKA2-207ENST00000583380 CANXP27824 592 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms