RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 BIVM-ERCC5R4GMW8 1640 aa22■■□□□ 1.11
TOP3A-215ENST00000583328 ABCC10Q5T3U5 1492 aa21.93■■□□□ 1.1
TOP3A-215ENST00000583328 KIF13AQ9H1H9 1805 aa21.93■■□□□ 1.1
TOP3A-215ENST00000583328 MAPKBP1O60336 1514 aa21.84■■□□□ 1.09
TOP3A-215ENST00000583328 RUSC2Q8N2Y8 1516 aa21.82■■□□□ 1.08
TOP3A-215ENST00000583328 KDM4FA0A1W2PPD8 638 aa21.8■■□□□ 1.08
TOP3A-215ENST00000583328 KIAA0586Q9BVV6 1533 aa21.79■■□□□ 1.08
TOP3A-215ENST00000583328 DIP2BQ9P265 1576 aa21.78■■□□□ 1.08
TOP3A-215ENST00000583328 ADCY10Q96PN6 1610 aa21.77■■□□□ 1.08
TOP3A-215ENST00000583328 IGF1RP08069 1367 aa21.77■■□□□ 1.08
TOP3A-215ENST00000583328 TTBK1Q5TCY1 1321 aaPredicted RBP21.76■■□□□ 1.07
TOP3A-215ENST00000583328 KDM6BO15054 1643 aa21.73■■□□□ 1.07
TOP3A-215ENST00000583328 PTPRGP23470 1445 aa21.72■■□□□ 1.07
TOP3A-215ENST00000583328 KIF27Q86VH2 1401 aa21.71■■□□□ 1.07
TOP3A-215ENST00000583328 TSPOAP1O95153 1857 aa21.64■■□□□ 1.05
TOP3A-215ENST00000583328 CARMIL1Q5VZK9 1371 aa21.63■■□□□ 1.05
TOP3A-215ENST00000583328 TNIKQ9UKE5 1360 aa21.63■■□□□ 1.05
TOP3A-215ENST00000583328 CARMIL2Q6F5E8 1435 aa21.63■■□□□ 1.05
TOP3A-215ENST00000583328 CUL7Q14999 1698 aa21.6■■□□□ 1.05
TOP3A-215ENST00000583328 ASXL2Q76L83 1435 aa21.58■■□□□ 1.05
TOP3A-215ENST00000583328 ABCC2Q92887 1545 aa21.58■■□□□ 1.04
TOP3A-215ENST00000583328 PLB1Q6P1J6 1458 aa21.57■■□□□ 1.04
TOP3A-215ENST00000583328 ILDR1Q86SU0 546 aaPredicted RBP21.55■■□□□ 1.04
TOP3A-215ENST00000583328 UACAQ9BZF9 1416 aa21.51■■□□□ 1.03
TOP3A-215ENST00000583328 UHRF1BP1LA0JNW5 1464 aa21.49■■□□□ 1.03
TOP3A-215ENST00000583328 GLI2P10070 1586 aa21.48■■□□□ 1.03
TOP3A-215ENST00000583328 IQGAP2Q13576 1575 aa21.46■■□□□ 1.03
TOP3A-215ENST00000583328 ADGRL1O94910 1474 aa21.45■■□□□ 1.03
TOP3A-215ENST00000583328 COL17A1Q9UMD9 1497 aaPredicted RBP21.43■■□□□ 1.02
TOP3A-215ENST00000583328 EPRSP07814 1512 aaKnown RBP21.42■■□□□ 1.02
TOP3A-215ENST00000583328 DISP1Q96F81 1524 aa21.42■■□□□ 1.02
TOP3A-215ENST00000583328 PPRC1Q5VV67 1664 aaKnown RBP21.41■■□□□ 1.02
TOP3A-215ENST00000583328 KDM5BQ9UGL1 1544 aa21.39■■□□□ 1.01
TOP3A-215ENST00000583328 TEX14Q8IWB6 1497 aa21.39■■□□□ 1.01
TOP3A-215ENST00000583328 RAPGEF2Q9Y4G8 1499 aa21.34■■□□□ 1.01
TOP3A-215ENST00000583328 UGGT2Q9NYU1 1516 aa21.33■■□□□ 1
TOP3A-215ENST00000583328 MAP3K4Q9Y6R4 1608 aa21.31■■□□□ 1
TOP3A-215ENST00000583328 KCNH8Q96L42 1107 aa21.29■■□□□ 1
TOP3A-215ENST00000583328 ZCCHC11Q5TAX3 1644 aaKnown RBP21.29■■□□□ 1
TOP3A-215ENST00000583328 WDR7Q9Y4E6 1490 aa21.27■■□□□ 1
TOP3A-215ENST00000583328 KIAA0556O60303 1618 aa21.26■□□□□ 0.99
TOP3A-215ENST00000583328 CD109Q6YHK3 1445 aa21.25■□□□□ 0.99
TOP3A-215ENST00000583328 HECW2Q9P2P5 1572 aa21.25■□□□□ 0.99
TOP3A-215ENST00000583328 MAGI3Q5TCQ9 1506 aa21.19■□□□□ 0.98
TOP3A-215ENST00000583328 GOLGA3Q08378 1498 aa21.17■□□□□ 0.98
TOP3A-215ENST00000583328 FAM9AQ8IZU1 332 aaPredicted RBP21.15■□□□□ 0.98
TOP3A-215ENST00000583328 ARID3CA6NKF2 412 aa21.11■□□□□ 0.97
TOP3A-215ENST00000583328 ABCA8O94911 1581 aa21.1■□□□□ 0.97
TOP3A-215ENST00000583328 CFAP43Q8NDM7 1665 aa21.09■□□□□ 0.97
TOP3A-215ENST00000583328 P3H3Q8IVL6 736 aa21.07■□□□□ 0.96
TOP3A-215ENST00000583328 FBXO41Q8TF61 875 aa21.03■□□□□ 0.96
TOP3A-215ENST00000583328 ARAP3Q8WWN8 1544 aa21.03■□□□□ 0.96
TOP3A-215ENST00000583328 CTTNBP2Q8WZ74 1663 aa21.02■□□□□ 0.96
TOP3A-215ENST00000583328 ATP10BO94823 1461 aa21.01■□□□□ 0.95
TOP3A-215ENST00000583328 PHLDB1Q86UU1 1377 aa21■□□□□ 0.95
TOP3A-215ENST00000583328 RAPGEF3O95398 923 aa21■□□□□ 0.95
TOP3A-215ENST00000583328 PRXQ9BXM0 1461 aa21■□□□□ 0.95
TOP3A-215ENST00000583328 KIF21BO75037 1637 aa21■□□□□ 0.95
TOP3A-215ENST00000583328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.98■□□□□ 0.95
TOP3A-215ENST00000583328 HNRNPUL2Q1KMD3 747 aaKnown RBP20.98■□□□□ 0.95
TOP3A-215ENST00000583328 ARID4BQ4LE39 1312 aaPredicted RBP20.96■□□□□ 0.95
TOP3A-215ENST00000583328 PTPRMP28827 1452 aa20.94■□□□□ 0.94
TOP3A-215ENST00000583328 NEO1Q92859 1461 aa20.88■□□□□ 0.93
TOP3A-215ENST00000583328 ABCA9Q8IUA7 1624 aa20.87■□□□□ 0.93
TOP3A-215ENST00000583328 ADAMTSL3P82987 1691 aa20.86■□□□□ 0.93
TOP3A-215ENST00000583328 CSRNP3Q8WYN3 585 aa20.85■□□□□ 0.93
TOP3A-215ENST00000583328 RANGAP1P46060 587 aaPredicted RBP20.84■□□□□ 0.93
TOP3A-215ENST00000583328 PLEKHD1A6NEE1 506 aa20.83■□□□□ 0.93
TOP3A-215ENST00000583328 PLPPR3Q6T4P5 718 aa20.8■□□□□ 0.92
TOP3A-215ENST00000583328 RAPGEF6Q8TEU7 1601 aa20.78■□□□□ 0.92
TOP3A-215ENST00000583328 PCF11O94913 1555 aaKnown RBP20.77■□□□□ 0.92
TOP3A-215ENST00000583328 DENND4BO75064 1496 aaPredicted RBP20.77■□□□□ 0.92
TOP3A-215ENST00000583328 BCORL1Q5H9F3 1711 aa20.77■□□□□ 0.92
TOP3A-215ENST00000583328 MADDQ8WXG6 1647 aa20.76■□□□□ 0.91
TOP3A-215ENST00000583328 SAMD9Q5K651 1589 aa20.76■□□□□ 0.91
TOP3A-215ENST00000583328 NUP153P49790 1475 aaKnown RBP20.75■□□□□ 0.91
TOP3A-215ENST00000583328 LMTK3Q96Q04 1460 aa20.75■□□□□ 0.91
TOP3A-215ENST00000583328 HSPA2P54652 639 aa20.75■□□□□ 0.91
TOP3A-215ENST00000583328 AKNAQ7Z591 1439 aa20.75■□□□□ 0.91
TOP3A-215ENST00000583328 FRMPD1Q5SYB0 1578 aa20.75■□□□□ 0.91
TOP3A-215ENST00000583328 FHOD3Q2V2M9 1422 aa20.72■□□□□ 0.91
TOP3A-215ENST00000583328 POGZQ7Z3K3 1410 aa20.71■□□□□ 0.91
TOP3A-215ENST00000583328 MLECQ14165 292 aa20.7■□□□□ 0.9
TOP3A-215ENST00000583328 FANCAO15360 1455 aa20.69■□□□□ 0.9
TOP3A-215ENST00000583328 ARHGEF40Q8TER5 1519 aa20.68■□□□□ 0.9
TOP3A-215ENST00000583328 RIMS1Q86UR5 1692 aaKnown RBP20.67■□□□□ 0.9
TOP3A-215ENST00000583328 YEATS2Q9ULM3 1422 aa20.64■□□□□ 0.89
TOP3A-215ENST00000583328 CERKQ8TCT0 537 aa20.64■□□□□ 0.89
TOP3A-215ENST00000583328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.63■□□□□ 0.89
TOP3A-215ENST00000583328 RICTORQ6R327 1708 aa20.61■□□□□ 0.89
TOP3A-215ENST00000583328 ZFYVE16Q7Z3T8 1539 aa20.61■□□□□ 0.89
TOP3A-215ENST00000583328 MAGI2Q86UL8 1455 aa20.61■□□□□ 0.89
TOP3A-215ENST00000583328 CFAP74Q9C0B2 1584 aa20.6■□□□□ 0.89
TOP3A-215ENST00000583328 EEA1Q15075 1411 aa20.6■□□□□ 0.89
TOP3A-215ENST00000583328 SCAPERQ9BY12 1400 aa20.6■□□□□ 0.89
TOP3A-215ENST00000583328 EFCAB5A4FU69 1503 aa20.59■□□□□ 0.89
TOP3A-215ENST00000583328 ATP1B4Q9UN42 357 aaPredicted RBP20.58■□□□□ 0.89
TOP3A-215ENST00000583328 ZMYM4Q5VZL5 1548 aa20.58■□□□□ 0.88
TOP3A-215ENST00000583328 PLCH2O75038 1416 aa20.56■□□□□ 0.88
TOP3A-215ENST00000583328 TTC37Q6PGP7 1564 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms