RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 SUPT5HO00267 1087 aaKnown RBP31.36■■■□□ 2.61
SNX11-212ENST00000583320 JPH4Q96JJ6 628 aa31.36■■■□□ 2.61
SNX11-212ENST00000583320 FAM69CQ0P6D2 419 aa31.33■■■□□ 2.61
SNX11-212ENST00000583320 DIP2BQ9P265 1576 aa31.33■■■□□ 2.61
SNX11-212ENST00000583320 MAPKBP1O60336 1514 aa31.32■■■□□ 2.6
SNX11-212ENST00000583320 ADCY10Q96PN6 1610 aa31.3■■■□□ 2.6
SNX11-212ENST00000583320 KDM4FA0A1W2PPD8 638 aa31.2■■■□□ 2.59
SNX11-212ENST00000583320 KDM6BO15054 1643 aa31.19■■■□□ 2.58
SNX11-212ENST00000583320 NPM1P06748 294 aaKnown RBP eCLIP31.16■■■□□ 2.58
SNX11-212ENST00000583320 TSPOAP1O95153 1857 aa31.13■■■□□ 2.57
SNX11-212ENST00000583320 KIAA0586Q9BVV6 1533 aa31.05■■■□□ 2.56
SNX11-212ENST00000583320 IGF1RP08069 1367 aa30.94■■■□□ 2.54
SNX11-212ENST00000583320 CUL7Q14999 1698 aa30.91■■■□□ 2.54
SNX11-212ENST00000583320 ILDR1Q86SU0 546 aaPredicted RBP30.91■■■□□ 2.54
SNX11-212ENST00000583320 PPRC1Q5VV67 1664 aaKnown RBP30.9■■■□□ 2.54
SNX11-212ENST00000583320 PTPRGP23470 1445 aa30.88■■■□□ 2.53
SNX11-212ENST00000583320 ABCC2Q92887 1545 aa30.84■■■□□ 2.53
SNX11-212ENST00000583320 TTBK1Q5TCY1 1321 aaPredicted RBP30.84■■■□□ 2.53
SNX11-212ENST00000583320 KIF27Q86VH2 1401 aa30.82■■■□□ 2.52
SNX11-212ENST00000583320 ASXL2Q76L83 1435 aa30.81■■■□□ 2.52
SNX11-212ENST00000583320 ADGRL1O94910 1474 aa30.8■■■□□ 2.52
SNX11-212ENST00000583320 GLI2P10070 1586 aa30.79■■■□□ 2.52
SNX11-212ENST00000583320 TNIKQ9UKE5 1360 aa30.77■■■□□ 2.52
SNX11-212ENST00000583320 PLB1Q6P1J6 1458 aa30.75■■■□□ 2.51
SNX11-212ENST00000583320 COL17A1Q9UMD9 1497 aaPredicted RBP30.74■■■□□ 2.51
SNX11-212ENST00000583320 CARMIL2Q6F5E8 1435 aa30.7■■■□□ 2.5
SNX11-212ENST00000583320 UHRF1BP1LA0JNW5 1464 aa30.7■■■□□ 2.5
SNX11-212ENST00000583320 CARMIL1Q5VZK9 1371 aa30.69■■■□□ 2.5
SNX11-212ENST00000583320 IQGAP2Q13576 1575 aa30.69■■■□□ 2.5
SNX11-212ENST00000583320 MAP3K4Q9Y6R4 1608 aa30.65■■■□□ 2.5
SNX11-212ENST00000583320 DISP1Q96F81 1524 aa30.64■■■□□ 2.5
SNX11-212ENST00000583320 UACAQ9BZF9 1416 aa30.64■■■□□ 2.49
SNX11-212ENST00000583320 EPRSP07814 1512 aaKnown RBP30.63■■■□□ 2.49
SNX11-212ENST00000583320 HECW2Q9P2P5 1572 aa30.61■■■□□ 2.49
SNX11-212ENST00000583320 KDM5BQ9UGL1 1544 aa30.58■■■□□ 2.49
SNX11-212ENST00000583320 ZCCHC11Q5TAX3 1644 aaKnown RBP30.56■■■□□ 2.48
SNX11-212ENST00000583320 TEX14Q8IWB6 1497 aa30.5■■■□□ 2.47
SNX11-212ENST00000583320 UGGT2Q9NYU1 1516 aa30.47■■■□□ 2.47
SNX11-212ENST00000583320 KIAA0556O60303 1618 aa30.45■■■□□ 2.47
SNX11-212ENST00000583320 WDR7Q9Y4E6 1490 aa30.39■■■□□ 2.46
SNX11-212ENST00000583320 RAPGEF2Q9Y4G8 1499 aa30.34■■■□□ 2.45
SNX11-212ENST00000583320 MAGI3Q5TCQ9 1506 aa30.27■■■□□ 2.44
SNX11-212ENST00000583320 CFAP43Q8NDM7 1665 aa30.27■■■□□ 2.44
SNX11-212ENST00000583320 CD109Q6YHK3 1445 aa30.25■■■□□ 2.43
SNX11-212ENST00000583320 KIF21BO75037 1637 aa30.24■■■□□ 2.43
SNX11-212ENST00000583320 ABCA8O94911 1581 aa30.22■■■□□ 2.43
SNX11-212ENST00000583320 CTTNBP2Q8WZ74 1663 aa30.19■■■□□ 2.42
SNX11-212ENST00000583320 KCNH8Q96L42 1107 aa30.17■■■□□ 2.42
SNX11-212ENST00000583320 GOLGA3Q08378 1498 aa30.08■■■□□ 2.41
SNX11-212ENST00000583320 ARAP3Q8WWN8 1544 aa30.06■■■□□ 2.4
SNX11-212ENST00000583320 FBXO41Q8TF61 875 aa30.02■■■□□ 2.4
SNX11-212ENST00000583320 ADAMTSL3P82987 1691 aa30.01■■■□□ 2.39
SNX11-212ENST00000583320 PTPRMP28827 1452 aa29.99■■■□□ 2.39
SNX11-212ENST00000583320 ARID3CA6NKF2 412 aa29.98■■■□□ 2.39
SNX11-212ENST00000583320 CHIC1Q5VXU3 224 aa29.95■■■□□ 2.39
SNX11-212ENST00000583320 ATP10BO94823 1461 aa29.93■■■□□ 2.38
SNX11-212ENST00000583320 ABCA9Q8IUA7 1624 aa29.93■■■□□ 2.38
SNX11-212ENST00000583320 PRXQ9BXM0 1461 aa29.91■■■□□ 2.38
SNX11-212ENST00000583320 FRMPD1Q5SYB0 1578 aa29.89■■■□□ 2.38
SNX11-212ENST00000583320 MADDQ8WXG6 1647 aa29.87■■■□□ 2.37
SNX11-212ENST00000583320 RAPGEF3O95398 923 aa29.87■■■□□ 2.37
SNX11-212ENST00000583320 BCORL1Q5H9F3 1711 aa29.86■■■□□ 2.37
SNX11-212ENST00000583320 PCF11O94913 1555 aaKnown RBP29.84■■■□□ 2.37
SNX11-212ENST00000583320 P3H3Q8IVL6 736 aa29.83■■■□□ 2.37
SNX11-212ENST00000583320 LMTK3Q96Q04 1460 aa29.81■■■□□ 2.36
SNX11-212ENST00000583320 PHLDB1Q86UU1 1377 aa29.81■■■□□ 2.36
SNX11-212ENST00000583320 NEO1Q92859 1461 aa29.8■■■□□ 2.36
SNX11-212ENST00000583320 SAMD9Q5K651 1589 aa29.74■■■□□ 2.35
SNX11-212ENST00000583320 RAPGEF6Q8TEU7 1601 aa29.74■■■□□ 2.35
SNX11-212ENST00000583320 RIMS1Q86UR5 1692 aaKnown RBP29.72■■■□□ 2.35
SNX11-212ENST00000583320 ARHGEF40Q8TER5 1519 aa29.71■■■□□ 2.35
SNX11-212ENST00000583320 ARID4BQ4LE39 1312 aaPredicted RBP29.71■■■□□ 2.35
SNX11-212ENST00000583320 NUP153P49790 1475 aaKnown RBP29.66■■■□□ 2.34
SNX11-212ENST00000583320 RICTORQ6R327 1708 aa29.65■■■□□ 2.34
SNX11-212ENST00000583320 SIGLEC1Q9BZZ2 1709 aa29.63■■■□□ 2.33
SNX11-212ENST00000583320 HSPA2P54652 639 aa29.62■■■□□ 2.33
SNX11-212ENST00000583320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.6■■■□□ 2.33
SNX11-212ENST00000583320 HNRNPUL2Q1KMD3 747 aaKnown RBP29.6■■■□□ 2.33
SNX11-212ENST00000583320 FAM9AQ8IZU1 332 aaPredicted RBP29.6■■■□□ 2.33
SNX11-212ENST00000583320 DENND4BO75064 1496 aaPredicted RBP29.58■■■□□ 2.33
SNX11-212ENST00000583320 FHOD3Q2V2M9 1422 aa29.55■■■□□ 2.32
SNX11-212ENST00000583320 AKNAQ7Z591 1439 aa29.54■■■□□ 2.32
SNX11-212ENST00000583320 PLPPR3Q6T4P5 718 aa29.53■■■□□ 2.32
SNX11-212ENST00000583320 ZMYM4Q5VZL5 1548 aa29.52■■■□□ 2.32
SNX11-212ENST00000583320 FANCAO15360 1455 aa29.52■■■□□ 2.32
SNX11-212ENST00000583320 YEATS2Q9ULM3 1422 aa29.52■■■□□ 2.32
SNX11-212ENST00000583320 TTC37Q6PGP7 1564 aa29.51■■■□□ 2.31
SNX11-212ENST00000583320 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.5■■■□□ 2.31
SNX11-212ENST00000583320 CFAP74Q9C0B2 1584 aa29.48■■■□□ 2.31
SNX11-212ENST00000583320 ZFYVE16Q7Z3T8 1539 aa29.48■■■□□ 2.31
SNX11-212ENST00000583320 RANGAP1P46060 587 aaPredicted RBP29.44■■■□□ 2.3
SNX11-212ENST00000583320 POGZQ7Z3K3 1410 aa29.44■■■□□ 2.3
SNX11-212ENST00000583320 EFCAB5A4FU69 1503 aa29.43■■■□□ 2.3
SNX11-212ENST00000583320 FER1L4A9Z1Z3 1794 aa29.42■■■□□ 2.3
SNX11-212ENST00000583320 CERKQ8TCT0 537 aa29.42■■■□□ 2.3
SNX11-212ENST00000583320 CSRNP3Q8WYN3 585 aa29.42■■■□□ 2.3
SNX11-212ENST00000583320 HECW1Q76N89 1606 aa29.42■■■□□ 2.3
SNX11-212ENST00000583320 PLEKHD1A6NEE1 506 aa29.41■■■□□ 2.3
SNX11-212ENST00000583320 MLECQ14165 292 aa29.38■■■□□ 2.29
SNX11-212ENST00000583320 MAGI2Q86UL8 1455 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms