RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 MAPKBP1O60336 1514 aa17.23■□□□□ 0.35
GGA3-212ENST00000582376 FHAD1B1AJZ9 1412 aa17.2■□□□□ 0.34
GGA3-212ENST00000582376 JPH4Q96JJ6 628 aa17.17■□□□□ 0.34
GGA3-212ENST00000582376 TSPOAP1O95153 1857 aa17.14■□□□□ 0.33
GGA3-212ENST00000582376 ADGRL1O94910 1474 aa17.13■□□□□ 0.33
GGA3-212ENST00000582376 HECW2Q9P2P5 1572 aa17.12■□□□□ 0.33
GGA3-212ENST00000582376 ADCY10Q96PN6 1610 aa17.1■□□□□ 0.33
GGA3-212ENST00000582376 WRNQ14191 1432 aaPredicted RBP eCLIP17.1■□□□□ 0.33
GGA3-212ENST00000582376 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
GGA3-212ENST00000582376 FBXO41Q8TF61 875 aa17.04■□□□□ 0.32
GGA3-212ENST00000582376 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
GGA3-212ENST00000582376 PPRC1Q5VV67 1664 aaKnown RBP16.93■□□□□ 0.3
GGA3-212ENST00000582376 TOP2BQ02880 1626 aa16.92■□□□□ 0.3
GGA3-212ENST00000582376 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
GGA3-212ENST00000582376 GLI2P10070 1586 aa16.91■□□□□ 0.3
GGA3-212ENST00000582376 COL17A1Q9UMD9 1497 aaPredicted RBP16.9■□□□□ 0.3
GGA3-212ENST00000582376 PLB1Q6P1J6 1458 aa16.89■□□□□ 0.29
GGA3-212ENST00000582376 ASXL2Q76L83 1435 aa16.88■□□□□ 0.29
GGA3-212ENST00000582376 KIAA0586Q9BVV6 1533 aa16.88■□□□□ 0.29
GGA3-212ENST00000582376 PTPRGP23470 1445 aa16.87■□□□□ 0.29
GGA3-212ENST00000582376 ABCC2Q92887 1545 aa16.86■□□□□ 0.29
GGA3-212ENST00000582376 TTBK1Q5TCY1 1321 aaPredicted RBP16.84■□□□□ 0.29
GGA3-212ENST00000582376 TEX14Q8IWB6 1497 aa16.83■□□□□ 0.28
GGA3-212ENST00000582376 LMTK3Q96Q04 1460 aa16.8■□□□□ 0.28
GGA3-212ENST00000582376 TNIKQ9UKE5 1360 aa16.78■□□□□ 0.28
GGA3-212ENST00000582376 EPRSP07814 1512 aaKnown RBP16.78■□□□□ 0.28
GGA3-212ENST00000582376 MAP3K4Q9Y6R4 1608 aa16.78■□□□□ 0.28
GGA3-212ENST00000582376 CUL7Q14999 1698 aa16.77■□□□□ 0.28
GGA3-212ENST00000582376 UHRF1BP1LA0JNW5 1464 aa16.75■□□□□ 0.27
GGA3-212ENST00000582376 CARMIL2Q6F5E8 1435 aa16.75■□□□□ 0.27
GGA3-212ENST00000582376 UACAQ9BZF9 1416 aa16.72■□□□□ 0.27
GGA3-212ENST00000582376 IGF1RP08069 1367 aa16.68■□□□□ 0.26
GGA3-212ENST00000582376 KDM5BQ9UGL1 1544 aa16.68■□□□□ 0.26
GGA3-212ENST00000582376 SOCS7O14512 581 aa16.64■□□□□ 0.25
GGA3-212ENST00000582376 KIF21BO75037 1637 aa16.63■□□□□ 0.25
GGA3-212ENST00000582376 ZCCHC11Q5TAX3 1644 aaKnown RBP16.63■□□□□ 0.25
GGA3-212ENST00000582376 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
GGA3-212ENST00000582376 PTPRMP28827 1452 aa16.61■□□□□ 0.25
GGA3-212ENST00000582376 IQGAP2Q13576 1575 aa16.6■□□□□ 0.25
GGA3-212ENST00000582376 WDR7Q9Y4E6 1490 aa16.6■□□□□ 0.25
GGA3-212ENST00000582376 MAGI3Q5TCQ9 1506 aa16.6■□□□□ 0.25
GGA3-212ENST00000582376 ILDR2Q71H61 639 aa16.59■□□□□ 0.25
GGA3-212ENST00000582376 CD109Q6YHK3 1445 aa16.59■□□□□ 0.25
GGA3-212ENST00000582376 DISP1Q96F81 1524 aa16.57■□□□□ 0.24
GGA3-212ENST00000582376 CARMIL1Q5VZK9 1371 aa16.57■□□□□ 0.24
GGA3-212ENST00000582376 DISP3Q9P2K9 1392 aa16.57■□□□□ 0.24
GGA3-212ENST00000582376 PCF11O94913 1555 aaKnown RBP16.56■□□□□ 0.24
GGA3-212ENST00000582376 SUPT5HO00267 1087 aaKnown RBP16.55■□□□□ 0.24
GGA3-212ENST00000582376 CFAP43Q8NDM7 1665 aa16.55■□□□□ 0.24
GGA3-212ENST00000582376 ADAMTSL3P82987 1691 aa16.54■□□□□ 0.24
GGA3-212ENST00000582376 CERKQ8TCT0 537 aa16.51■□□□□ 0.23
GGA3-212ENST00000582376 KCNH8Q96L42 1107 aa16.51■□□□□ 0.23
GGA3-212ENST00000582376 ARAP3Q8WWN8 1544 aa16.49■□□□□ 0.23
GGA3-212ENST00000582376 UGGT2Q9NYU1 1516 aa16.47■□□□□ 0.23
GGA3-212ENST00000582376 KIAA0556O60303 1618 aa16.45■□□□□ 0.22
GGA3-212ENST00000582376 MADDQ8WXG6 1647 aa16.44■□□□□ 0.22
GGA3-212ENST00000582376 BCORL1Q5H9F3 1711 aa16.43■□□□□ 0.22
GGA3-212ENST00000582376 HSPA2P54652 639 aa16.43■□□□□ 0.22
GGA3-212ENST00000582376 ARID4BQ4LE39 1312 aaPredicted RBP16.43■□□□□ 0.22
GGA3-212ENST00000582376 PHLDB1Q86UU1 1377 aa16.39■□□□□ 0.21
GGA3-212ENST00000582376 RAPGEF3O95398 923 aa16.38■□□□□ 0.21
GGA3-212ENST00000582376 SPATA31D1Q6ZQQ2 1576 aa16.36■□□□□ 0.21
GGA3-212ENST00000582376 RIMS1Q86UR5 1692 aaKnown RBP16.36■□□□□ 0.21
GGA3-212ENST00000582376 ABCA8O94911 1581 aa16.35■□□□□ 0.21
GGA3-212ENST00000582376 PLPPR3Q6T4P5 718 aa16.33■□□□□ 0.2
GGA3-212ENST00000582376 RAPGEF2Q9Y4G8 1499 aa16.33■□□□□ 0.2
GGA3-212ENST00000582376 NEO1Q92859 1461 aa16.3■□□□□ 0.2
GGA3-212ENST00000582376 GOLGA3Q08378 1498 aa16.29■□□□□ 0.2
GGA3-212ENST00000582376 ABCA9Q8IUA7 1624 aa16.28■□□□□ 0.2
GGA3-212ENST00000582376 FRMPD1Q5SYB0 1578 aa16.28■□□□□ 0.2
GGA3-212ENST00000582376 ARHGEF40Q8TER5 1519 aa16.26■□□□□ 0.19
GGA3-212ENST00000582376 POGZQ7Z3K3 1410 aa16.26■□□□□ 0.19
GGA3-212ENST00000582376 ARID3CA6NKF2 412 aa16.25■□□□□ 0.19
GGA3-212ENST00000582376 ATP10BO94823 1461 aa16.22■□□□□ 0.19
GGA3-212ENST00000582376 DMRT2Q9Y5R5 561 aa16.22■□□□□ 0.19
GGA3-212ENST00000582376 FANCAO15360 1455 aa16.22■□□□□ 0.19
GGA3-212ENST00000582376 FAM9AQ8IZU1 332 aaPredicted RBP16.21■□□□□ 0.19
GGA3-212ENST00000582376 YEATS2Q9ULM3 1422 aa16.2■□□□□ 0.18
GGA3-212ENST00000582376 CTTNBP2Q8WZ74 1663 aa16.2■□□□□ 0.18
GGA3-212ENST00000582376 AKNAQ7Z591 1439 aa16.19■□□□□ 0.18
GGA3-212ENST00000582376 DENND4BO75064 1496 aaPredicted RBP16.19■□□□□ 0.18
GGA3-212ENST00000582376 MLECQ14165 292 aa16.17■□□□□ 0.18
GGA3-212ENST00000582376 TTC37Q6PGP7 1564 aa16.16■□□□□ 0.18
GGA3-212ENST00000582376 FHOD3Q2V2M9 1422 aa16.15■□□□□ 0.18
GGA3-212ENST00000582376 RICTORQ6R327 1708 aa16.14■□□□□ 0.17
GGA3-212ENST00000582376 FER1L4A9Z1Z3 1794 aa16.14■□□□□ 0.17
GGA3-212ENST00000582376 PREX1Q8TCU6 1659 aa16.14■□□□□ 0.17
GGA3-212ENST00000582376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.12■□□□□ 0.17
GGA3-212ENST00000582376 HNRNPUL2Q1KMD3 747 aaKnown RBP16.12■□□□□ 0.17
GGA3-212ENST00000582376 EFCAB5A4FU69 1503 aa16.12■□□□□ 0.17
GGA3-212ENST00000582376 ZFYVE16Q7Z3T8 1539 aa16.12■□□□□ 0.17
GGA3-212ENST00000582376 STRCQ7RTU9 1775 aa16.12■□□□□ 0.17
GGA3-212ENST00000582376 SIGLEC1Q9BZZ2 1709 aa16.11■□□□□ 0.17
GGA3-212ENST00000582376 ZMYM4Q5VZL5 1548 aa16.1■□□□□ 0.17
GGA3-212ENST00000582376 P3H3Q8IVL6 736 aa16.09■□□□□ 0.17
GGA3-212ENST00000582376 PTPRTO14522 1441 aa16.09■□□□□ 0.17
GGA3-212ENST00000582376 MAGI2Q86UL8 1455 aa16.09■□□□□ 0.17
GGA3-212ENST00000582376 UHRF1BP1Q6BDS2 1440 aa16.08■□□□□ 0.16
GGA3-212ENST00000582376 IQSEC2Q5JU85 1478 aa16.08■□□□□ 0.16
GGA3-212ENST00000582376 CEBPAP49715 358 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms