RNA–Protein interactions for RNA: ENST00000580034.2

RTTN-205, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 824 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-205ENST00000580034 SLC39A7Q92504 469 aa11.26□□□□□ -0.61
RTTN-205ENST00000580034 ASTLQ6HA08 431 aaPredicted RBP11.24□□□□□ -0.61
RTTN-205ENST00000580034 STAG3Q9UJ98 1225 aa11.24□□□□□ -0.61
RTTN-205ENST00000580034 ATMINO43313 823 aaPredicted RBP11.22□□□□□ -0.61
RTTN-205ENST00000580034 SCUBE2Q9NQ36 999 aa11.19□□□□□ -0.62
RTTN-205ENST00000580034 ABCC9O60706 1549 aa11.18□□□□□ -0.62
RTTN-205ENST00000580034 MS4A3Q96HJ5 214 aa11.17□□□□□ -0.62
RTTN-205ENST00000580034 NPM1P06748 294 aaKnown RBP eCLIP11.16□□□□□ -0.62
RTTN-205ENST00000580034 CDAN1Q8IWY9 1227 aa11.11□□□□□ -0.63
RTTN-205ENST00000580034 MNX1P50219 401 aaPredicted RBP11.08□□□□□ -0.64
RTTN-205ENST00000580034 ATN1P54259 1190 aaPredicted RBP11.07□□□□□ -0.64
RTTN-205ENST00000580034 POTEFA5A3E0 1075 aa11.02□□□□□ -0.65
RTTN-205ENST00000580034 TSPYL2Q9H2G4 693 aaPredicted RBP10.95□□□□□ -0.66
RTTN-205ENST00000580034 BMP2KQ9NSY1 1161 aaPredicted RBP10.94□□□□□ -0.66
RTTN-205ENST00000580034 CCDC61Q9Y6R9 512 aa10.91□□□□□ -0.66
RTTN-205ENST00000580034 SPDYE4A6NLX3 237 aa10.9□□□□□ -0.66
RTTN-205ENST00000580034 KIF12Q96FN5 646 aa10.9□□□□□ -0.66
RTTN-205ENST00000580034 MMRN1Q13201 1228 aa10.89□□□□□ -0.67
RTTN-205ENST00000580034 SEC24BO95487 1268 aa10.88□□□□□ -0.67
RTTN-205ENST00000580034 TRPC6Q9Y210 931 aa10.88□□□□□ -0.67
RTTN-205ENST00000580034 COLQQ9Y215 455 aaPredicted RBP10.88□□□□□ -0.67
RTTN-205ENST00000580034 ST18O60284 1047 aa10.87□□□□□ -0.67
RTTN-205ENST00000580034 TIE1P35590 1138 aa10.86□□□□□ -0.67
RTTN-205ENST00000580034 SPNS2Q8IVW8 549 aa10.85□□□□□ -0.67
RTTN-205ENST00000580034 SLAIN1Q8ND83 568 aa10.81□□□□□ -0.68
RTTN-205ENST00000580034 MAP3K13O43283 966 aa10.8□□□□□ -0.68
RTTN-205ENST00000580034 TTLL13PA6NNM8 815 aa10.78□□□□□ -0.68
RTTN-205ENST00000580034 IER5LQ5T953 404 aa10.74□□□□□ -0.69
RTTN-205ENST00000580034 TRIM35Q9UPQ4 493 aa10.72□□□□□ -0.69
RTTN-205ENST00000580034 CCDC180Q9P1Z9 1646 aa10.71□□□□□ -0.69
RTTN-205ENST00000580034 TMEM121BQ9BXQ6 578 aaPredicted RBP10.68□□□□□ -0.7
RTTN-205ENST00000580034 RASEFQ8IZ41 740 aa10.62□□□□□ -0.71
RTTN-205ENST00000580034 MARVELD3Q96A59 401 aa10.62□□□□□ -0.71
RTTN-205ENST00000580034 SNPHO15079 494 aa10.61□□□□□ -0.71
RTTN-205ENST00000580034 PLCG2P16885 1265 aa10.6□□□□□ -0.71
RTTN-205ENST00000580034 SGIP1Q9BQI5 828 aa10.6□□□□□ -0.71
RTTN-205ENST00000580034 PCDHB13Q9Y5F0 798 aa10.59□□□□□ -0.71
RTTN-205ENST00000580034 PLEKHG5O94827 1062 aa10.55□□□□□ -0.72
RTTN-205ENST00000580034 CSRNP3Q8WYN3 585 aa10.55□□□□□ -0.72
RTTN-205ENST00000580034 IRX5P78411 483 aaPredicted RBP10.53□□□□□ -0.72
RTTN-205ENST00000580034 TMEM106CQ9BVX2 250 aa10.53□□□□□ -0.72
RTTN-205ENST00000580034 MIER1Q8N108 512 aa10.52□□□□□ -0.73
RTTN-205ENST00000580034 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.51□□□□□ -0.73
RTTN-205ENST00000580034 IFNL1Q8IU54 200 aa10.5□□□□□ -0.73
RTTN-205ENST00000580034 PROM2Q8N271 834 aa10.49□□□□□ -0.73
RTTN-205ENST00000580034 OCEL1Q9H607 264 aa10.48□□□□□ -0.73
RTTN-205ENST00000580034 EMP3P54852 163 aa10.47□□□□□ -0.73
RTTN-205ENST00000580034 KRTAP3-3Q9BYR6 98 aa10.47□□□□□ -0.73
RTTN-205ENST00000580034 KRTAP3-2Q9BYR7 98 aa10.47□□□□□ -0.73
RTTN-205ENST00000580034 POTEB3A0JP26 581 aa10.43□□□□□ -0.74
RTTN-205ENST00000580034 POTEBQ6S5H4 581 aa10.43□□□□□ -0.74
RTTN-205ENST00000580034 HS3ST6Q96QI5 342 aa10.42□□□□□ -0.74
RTTN-205ENST00000580034 RB1CC1Q8TDY2 1594 aa10.42□□□□□ -0.74
RTTN-205ENST00000580034 FAM205CA6NFA0 338 aa10.4□□□□□ -0.74
RTTN-205ENST00000580034 NUBP1P53384 320 aa10.36□□□□□ -0.75
RTTN-205ENST00000580034 PLCD3Q8N3E9 789 aa10.32□□□□□ -0.76
RTTN-205ENST00000580034 C3orf67Q6ZVT6 689 aa10.31□□□□□ -0.76
RTTN-205ENST00000580034 FAM212AQ96EL1 285 aa10.29□□□□□ -0.76
RTTN-205ENST00000580034 DNAJC5Q9H3Z4 198 aa10.28□□□□□ -0.76
RTTN-205ENST00000580034 ZBTB47Q9UFB7 747 aaPredicted RBP10.28□□□□□ -0.76
RTTN-205ENST00000580034 L3MBTL3Q96JM7 780 aaPredicted RBP10.26□□□□□ -0.77
RTTN-205ENST00000580034 PDCD7Q8N8D1 485 aaKnown RBP10.25□□□□□ -0.77
RTTN-205ENST00000580034 RNF166Q96A37 237 aaPredicted RBP10.25□□□□□ -0.77
RTTN-205ENST00000580034 UNC13AQ9UPW8 1703 aa10.24□□□□□ -0.77
RTTN-205ENST00000580034 PCDHB8Q9UN66 801 aa10.21□□□□□ -0.77
RTTN-205ENST00000580034 NACADO15069 1562 aa10.19□□□□□ -0.78
RTTN-205ENST00000580034 PYGBP11216 843 aa10.19□□□□□ -0.78
RTTN-205ENST00000580034 MYT1LQ9UL68 1186 aa10.16□□□□□ -0.78
RTTN-205ENST00000580034 MKRN3Q13064 507 aaKnown RBP10.15□□□□□ -0.78
RTTN-205ENST00000580034 DCAF8Q5TAQ9 597 aa10.15□□□□□ -0.78
RTTN-205ENST00000580034 GOLGA2Q08379 1002 aa10.14□□□□□ -0.79
RTTN-205ENST00000580034 ERBB3P21860 1342 aa10.13□□□□□ -0.79
RTTN-205ENST00000580034 HOXB3P14651 431 aaPredicted RBP10.13□□□□□ -0.79
RTTN-205ENST00000580034 HOXB1P14653 301 aaPredicted RBP10.12□□□□□ -0.79
RTTN-205ENST00000580034 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.12□□□□□ -0.79
RTTN-205ENST00000580034 CECR2Q9BXF3 1484 aa10.1□□□□□ -0.79
RTTN-205ENST00000580034 BICRAQ9NZM4 1560 aa10.09□□□□□ -0.79
RTTN-205ENST00000580034 ZNF710Q8N1W2 664 aa10.09□□□□□ -0.79
RTTN-205ENST00000580034 DCAF8L2P0C7V8 631 aa10.08□□□□□ -0.8
RTTN-205ENST00000580034 CC2D2AQ9P2K1 1620 aa10.07□□□□□ -0.8
RTTN-205ENST00000580034 DOK7Q18PE1 504 aa10.03□□□□□ -0.8
RTTN-205ENST00000580034 VARS2Q5ST30 1063 aaKnown RBP10.03□□□□□ -0.8
RTTN-205ENST00000580034 DPY19L2Q6NUT2 758 aa10.03□□□□□ -0.8
RTTN-205ENST00000580034 ZNF467Q7Z7K2 595 aaPredicted RBP10.01□□□□□ -0.81
RTTN-205ENST00000580034 ILDR1Q86SU0 546 aaPredicted RBP10.01□□□□□ -0.81
RTTN-205ENST00000580034 G3V3G9 751 aa10□□□□□ -0.81
RTTN-205ENST00000580034 EHMT2Q96KQ7 1210 aa10□□□□□ -0.81
RTTN-205ENST00000580034 PTGER2P43116 358 aa9.99□□□□□ -0.81
RTTN-205ENST00000580034 ZNF687Q8N1G0 1237 aa9.99□□□□□ -0.81
RTTN-205ENST00000580034 BOLA1Q9Y3E2 137 aa9.98□□□□□ -0.81
RTTN-205ENST00000580034 RIMBP2O15034 1052 aa9.96□□□□□ -0.82
RTTN-205ENST00000580034 PSEN1P49768 467 aa9.96□□□□□ -0.82
RTTN-205ENST00000580034 EIF4G1Q04637 1599 aaKnown RBP9.92□□□□□ -0.82
RTTN-205ENST00000580034 ANKRD13DQ6ZTN6 518 aa9.9□□□□□ -0.82
RTTN-205ENST00000580034 SHROOM4Q9ULL8 1493 aa9.89□□□□□ -0.83
RTTN-205ENST00000580034 CHRM1P11229 460 aaPredicted RBP9.87□□□□□ -0.83
RTTN-205ENST00000580034 GSE1Q14687 1217 aa9.87□□□□□ -0.83
RTTN-205ENST00000580034 ZSWIM6Q9HCJ5 1215 aa9.87□□□□□ -0.83
RTTN-205ENST00000580034 PLA2G2EQ9NZK7 142 aa9.87□□□□□ -0.83
RTTN-205ENST00000580034 CABP2Q9NPB3 220 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms