RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 ADCY10Q96PN6 1610 aa21.09■□□□□ 0.97
GGA3-206ENST00000578773 MAPKBP1O60336 1514 aa21.09■□□□□ 0.97
GGA3-206ENST00000578773 ADGRL1O94910 1474 aa21.06■□□□□ 0.96
GGA3-206ENST00000578773 PRG4Q92954 1404 aaPredicted RBP21.05■□□□□ 0.96
GGA3-206ENST00000578773 PPRC1Q5VV67 1664 aaKnown RBP20.99■□□□□ 0.95
GGA3-206ENST00000578773 RUSC2Q8N2Y8 1516 aa20.94■□□□□ 0.94
GGA3-206ENST00000578773 FHAD1B1AJZ9 1412 aa20.93■□□□□ 0.94
GGA3-206ENST00000578773 JPH4Q96JJ6 628 aa20.87■□□□□ 0.93
GGA3-206ENST00000578773 NPM1P06748 294 aaKnown RBP eCLIP20.85■□□□□ 0.93
GGA3-206ENST00000578773 ERICH3Q5RHP9 1530 aa20.82■□□□□ 0.92
GGA3-206ENST00000578773 COL17A1Q9UMD9 1497 aaPredicted RBP20.81■□□□□ 0.92
GGA3-206ENST00000578773 BIVM-ERCC5R4GMW8 1640 aa20.79■□□□□ 0.92
GGA3-206ENST00000578773 WRNQ14191 1432 aaPredicted RBP eCLIP20.78■□□□□ 0.92
GGA3-206ENST00000578773 FBXO41Q8TF61 875 aa20.77■□□□□ 0.92
GGA3-206ENST00000578773 CUL7Q14999 1698 aa20.73■□□□□ 0.91
GGA3-206ENST00000578773 TOP2BQ02880 1626 aa20.73■□□□□ 0.91
GGA3-206ENST00000578773 GLI2P10070 1586 aa20.69■□□□□ 0.9
GGA3-206ENST00000578773 MAP3K4Q9Y6R4 1608 aa20.66■□□□□ 0.9
GGA3-206ENST00000578773 ASXL2Q76L83 1435 aa20.64■□□□□ 0.89
GGA3-206ENST00000578773 ABCC2Q92887 1545 aa20.62■□□□□ 0.89
GGA3-206ENST00000578773 TTBK1Q5TCY1 1321 aaPredicted RBP20.61■□□□□ 0.89
GGA3-206ENST00000578773 LMTK3Q96Q04 1460 aa20.58■□□□□ 0.89
GGA3-206ENST00000578773 KIF21BO75037 1637 aa20.58■□□□□ 0.89
GGA3-206ENST00000578773 KIAA0586Q9BVV6 1533 aa20.55■□□□□ 0.88
GGA3-206ENST00000578773 PLB1Q6P1J6 1458 aa20.55■□□□□ 0.88
GGA3-206ENST00000578773 EPRSP07814 1512 aaKnown RBP20.53■□□□□ 0.88
GGA3-206ENST00000578773 PTPRGP23470 1445 aa20.53■□□□□ 0.88
GGA3-206ENST00000578773 ZCCHC11Q5TAX3 1644 aaKnown RBP20.49■□□□□ 0.87
GGA3-206ENST00000578773 ILDR2Q71H61 639 aa20.48■□□□□ 0.87
GGA3-206ENST00000578773 TEX14Q8IWB6 1497 aa20.45■□□□□ 0.86
GGA3-206ENST00000578773 UHRF1BP1LA0JNW5 1464 aa20.42■□□□□ 0.86
GGA3-206ENST00000578773 TNIKQ9UKE5 1360 aa20.41■□□□□ 0.86
GGA3-206ENST00000578773 ADAMTSL3P82987 1691 aa20.38■□□□□ 0.85
GGA3-206ENST00000578773 KDM5BQ9UGL1 1544 aa20.37■□□□□ 0.85
GGA3-206ENST00000578773 UACAQ9BZF9 1416 aa20.36■□□□□ 0.85
GGA3-206ENST00000578773 PTPRMP28827 1452 aa20.35■□□□□ 0.85
GGA3-206ENST00000578773 SOCS7O14512 581 aa20.33■□□□□ 0.85
GGA3-206ENST00000578773 PCF11O94913 1555 aaKnown RBP20.33■□□□□ 0.84
GGA3-206ENST00000578773 DISP1Q96F81 1524 aa20.32■□□□□ 0.84
GGA3-206ENST00000578773 IQGAP2Q13576 1575 aa20.32■□□□□ 0.84
GGA3-206ENST00000578773 IGF1RP08069 1367 aa20.32■□□□□ 0.84
GGA3-206ENST00000578773 CFAP43Q8NDM7 1665 aa20.32■□□□□ 0.84
GGA3-206ENST00000578773 CARMIL2Q6F5E8 1435 aa20.3■□□□□ 0.84
GGA3-206ENST00000578773 MADDQ8WXG6 1647 aa20.29■□□□□ 0.84
GGA3-206ENST00000578773 DISP3Q9P2K9 1392 aa20.28■□□□□ 0.84
GGA3-206ENST00000578773 WDR7Q9Y4E6 1490 aa20.27■□□□□ 0.84
GGA3-206ENST00000578773 BCORL1Q5H9F3 1711 aa20.25■□□□□ 0.83
GGA3-206ENST00000578773 MAGI3Q5TCQ9 1506 aa20.25■□□□□ 0.83
GGA3-206ENST00000578773 RIMS1Q86UR5 1692 aaKnown RBP20.22■□□□□ 0.83
GGA3-206ENST00000578773 CD109Q6YHK3 1445 aa20.21■□□□□ 0.83
GGA3-206ENST00000578773 KIAA0556O60303 1618 aa20.2■□□□□ 0.82
GGA3-206ENST00000578773 SPATA31D1Q6ZQQ2 1576 aa20.18■□□□□ 0.82
GGA3-206ENST00000578773 HSPA2P54652 639 aa20.17■□□□□ 0.82
GGA3-206ENST00000578773 CERKQ8TCT0 537 aa20.15■□□□□ 0.82
GGA3-206ENST00000578773 KIF27Q86VH2 1401 aa20.15■□□□□ 0.82
GGA3-206ENST00000578773 CARMIL1Q5VZK9 1371 aa20.14■□□□□ 0.81
GGA3-206ENST00000578773 ARAP3Q8WWN8 1544 aa20.12■□□□□ 0.81
GGA3-206ENST00000578773 UGGT2Q9NYU1 1516 aa20.12■□□□□ 0.81
GGA3-206ENST00000578773 KCNH8Q96L42 1107 aa20.12■□□□□ 0.81
GGA3-206ENST00000578773 SUPT5HO00267 1087 aaKnown RBP20.11■□□□□ 0.81
GGA3-206ENST00000578773 FRMPD1Q5SYB0 1578 aa20.11■□□□□ 0.81
GGA3-206ENST00000578773 SIGLEC1Q9BZZ2 1709 aa20.08■□□□□ 0.81
GGA3-206ENST00000578773 ABCA8O94911 1581 aa20.05■□□□□ 0.8
GGA3-206ENST00000578773 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
GGA3-206ENST00000578773 RAPGEF3O95398 923 aa20.01■□□□□ 0.79
GGA3-206ENST00000578773 ABCA9Q8IUA7 1624 aa19.98■□□□□ 0.79
GGA3-206ENST00000578773 STRCQ7RTU9 1775 aa19.97■□□□□ 0.79
GGA3-206ENST00000578773 ARID4BQ4LE39 1312 aaPredicted RBP19.97■□□□□ 0.79
GGA3-206ENST00000578773 CTTNBP2Q8WZ74 1663 aa19.97■□□□□ 0.79
GGA3-206ENST00000578773 ARHGEF40Q8TER5 1519 aa19.97■□□□□ 0.79
GGA3-206ENST00000578773 RICTORQ6R327 1708 aa19.93■□□□□ 0.78
GGA3-206ENST00000578773 FER1L4A9Z1Z3 1794 aa19.93■□□□□ 0.78
GGA3-206ENST00000578773 ARID3CA6NKF2 412 aa19.93■□□□□ 0.78
GGA3-206ENST00000578773 PREX1Q8TCU6 1659 aa19.87■□□□□ 0.77
GGA3-206ENST00000578773 RAPGEF2Q9Y4G8 1499 aa19.86■□□□□ 0.77
GGA3-206ENST00000578773 TTC37Q6PGP7 1564 aa19.84■□□□□ 0.77
GGA3-206ENST00000578773 NEO1Q92859 1461 aa19.84■□□□□ 0.77
GGA3-206ENST00000578773 ATP10BO94823 1461 aa19.83■□□□□ 0.76
GGA3-206ENST00000578773 PHLDB1Q86UU1 1377 aa19.79■□□□□ 0.76
GGA3-206ENST00000578773 YEATS2Q9ULM3 1422 aa19.77■□□□□ 0.76
GGA3-206ENST00000578773 FANCAO15360 1455 aa19.75■□□□□ 0.75
GGA3-206ENST00000578773 MLECQ14165 292 aa19.75■□□□□ 0.75
GGA3-206ENST00000578773 LTBP4Q8N2S1 1624 aa19.75■□□□□ 0.75
GGA3-206ENST00000578773 GOLGA3Q08378 1498 aa19.74■□□□□ 0.75
GGA3-206ENST00000578773 ZMYM4Q5VZL5 1548 aa19.72■□□□□ 0.75
GGA3-206ENST00000578773 ZFYVE16Q7Z3T8 1539 aa19.72■□□□□ 0.75
GGA3-206ENST00000578773 DENND4BO75064 1496 aaPredicted RBP19.71■□□□□ 0.75
GGA3-206ENST00000578773 CEBPAP49715 358 aaPredicted RBP19.69■□□□□ 0.74
GGA3-206ENST00000578773 ARHGEF12Q9NZN5 1544 aa19.69■□□□□ 0.74
GGA3-206ENST00000578773 HECW1Q76N89 1606 aa19.69■□□□□ 0.74
GGA3-206ENST00000578773 FHOD3Q2V2M9 1422 aa19.68■□□□□ 0.74
GGA3-206ENST00000578773 AKNAQ7Z591 1439 aa19.68■□□□□ 0.74
GGA3-206ENST00000578773 POGZQ7Z3K3 1410 aa19.68■□□□□ 0.74
GGA3-206ENST00000578773 RAPGEF6Q8TEU7 1601 aa19.67■□□□□ 0.74
GGA3-206ENST00000578773 EFCAB5A4FU69 1503 aa19.66■□□□□ 0.74
GGA3-206ENST00000578773 P3H3Q8IVL6 736 aa19.66■□□□□ 0.74
GGA3-206ENST00000578773 CFAP74Q9C0B2 1584 aa19.63■□□□□ 0.73
GGA3-206ENST00000578773 SETD1BQ9UPS6 1966 aaKnown RBP19.61■□□□□ 0.73
GGA3-206ENST00000578773 C3P01024 1663 aa19.6■□□□□ 0.73
GGA3-206ENST00000578773 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms