RNA–Protein interactions for RNA: ENST00000578561.1

ERVFRD-3-201, Transcript of endogenous retrovirus group FRD member 3, humanhuman

BASIC

Gene ERVFRD-3, Length 1,617 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFRD-3-201ENST00000578561 PAK3O75914 559 aaPredicted RBP9.12□□□□□ -0.95
ERVFRD-3-201ENST00000578561 PCDH10Q9P2E7 1040 aa9.11□□□□□ -0.95
ERVFRD-3-201ENST00000578561 POTEGQ6S5H5 508 aa9.09□□□□□ -0.95
ERVFRD-3-201ENST00000578561 CREBZFQ9NS37 354 aa9.09□□□□□ -0.95
ERVFRD-3-201ENST00000578561 POTEB2H3BUK9 544 aa9.05□□□□□ -0.96
ERVFRD-3-201ENST00000578561 RSF1Q96T23 1441 aaPredicted RBP9.05□□□□□ -0.96
ERVFRD-3-201ENST00000578561 RB1CC1Q8TDY2 1594 aa9.03□□□□□ -0.96
ERVFRD-3-201ENST00000578561 NPM1P06748 294 aaKnown RBP eCLIP9.01□□□□□ -0.97
ERVFRD-3-201ENST00000578561 MAMSTRQ6ZN01 415 aa9□□□□□ -0.97
ERVFRD-3-201ENST00000578561 PHF12Q96QT6 1004 aa9□□□□□ -0.97
ERVFRD-3-201ENST00000578561 CECR2Q9BXF3 1484 aa8.98□□□□□ -0.97
ERVFRD-3-201ENST00000578561 SLC39A7Q92504 469 aa8.97□□□□□ -0.97
ERVFRD-3-201ENST00000578561 C7P10643 843 aa8.96□□□□□ -0.98
ERVFRD-3-201ENST00000578561 METRNQ9UJH8 293 aa8.96□□□□□ -0.98
ERVFRD-3-201ENST00000578561 PELP1Q8IZL8 1130 aaKnown RBP8.95□□□□□ -0.98
ERVFRD-3-201ENST00000578561 ASTLQ6HA08 431 aaPredicted RBP8.94□□□□□ -0.98
ERVFRD-3-201ENST00000578561 MROH2BQ7Z745 1585 aa8.94□□□□□ -0.98
ERVFRD-3-201ENST00000578561 ATMINO43313 823 aaPredicted RBP8.9□□□□□ -0.99
ERVFRD-3-201ENST00000578561 SCUBE2Q9NQ36 999 aa8.9□□□□□ -0.99
ERVFRD-3-201ENST00000578561 MS4A3Q96HJ5 214 aa8.88□□□□□ -0.99
ERVFRD-3-201ENST00000578561 FAM163AQ96GL9 167 aaPredicted RBP8.86□□□□□ -0.99
ERVFRD-3-201ENST00000578561 UNC13AQ9UPW8 1703 aa8.86□□□□□ -0.99
ERVFRD-3-201ENST00000578561 POTEJP0CG39 1038 aa8.85□□□□□ -0.99
ERVFRD-3-201ENST00000578561 MNX1P50219 401 aaPredicted RBP8.85□□□□□ -0.99
ERVFRD-3-201ENST00000578561 WIZO95785 1651 aa8.84□□□□□ -0.99
ERVFRD-3-201ENST00000578561 BAZ1AQ9NRL2 1556 aaPredicted RBP8.84□□□□□ -1
ERVFRD-3-201ENST00000578561 SPDYE4A6NLX3 237 aa8.83□□□□□ -1
ERVFRD-3-201ENST00000578561 BICRAQ9NZM4 1560 aa8.83□□□□□ -1
ERVFRD-3-201ENST00000578561 LCE2DQ5TA82 110 aaPredicted RBP8.81□□□□□ -1
ERVFRD-3-201ENST00000578561 SMARCA4P51532 1647 aa8.78□□□□□ -1
ERVFRD-3-201ENST00000578561 ATN1P54259 1190 aaPredicted RBP8.77□□□□□ -1.01
ERVFRD-3-201ENST00000578561 TSPYL2Q9H2G4 693 aaPredicted RBP8.74□□□□□ -1.01
ERVFRD-3-201ENST00000578561 TOP2AP11388 1531 aaKnown RBP8.74□□□□□ -1.01
ERVFRD-3-201ENST00000578561 LOC105371045A0A1W2PR82 267 aa8.72□□□□□ -1.01
ERVFRD-3-201ENST00000578561 EIF4G1Q04637 1599 aaKnown RBP8.72□□□□□ -1.01
ERVFRD-3-201ENST00000578561 CCDC61Q9Y6R9 512 aa8.72□□□□□ -1.01
ERVFRD-3-201ENST00000578561 TRIM41Q8WV44 630 aa8.71□□□□□ -1.02
ERVFRD-3-201ENST00000578561 KIF12Q96FN5 646 aa8.71□□□□□ -1.02
ERVFRD-3-201ENST00000578561 TIE1P35590 1138 aa8.7□□□□□ -1.02
ERVFRD-3-201ENST00000578561 BMP2KQ9NSY1 1161 aaPredicted RBP8.7□□□□□ -1.02
ERVFRD-3-201ENST00000578561 CCDC88BA6NC98 1476 aa8.69□□□□□ -1.02
ERVFRD-3-201ENST00000578561 CDAN1Q8IWY9 1227 aa8.69□□□□□ -1.02
ERVFRD-3-201ENST00000578561 SMARCA2P51531 1590 aa8.68□□□□□ -1.02
ERVFRD-3-201ENST00000578561 POTEFA5A3E0 1075 aa8.68□□□□□ -1.02
ERVFRD-3-201ENST00000578561 PEG3Q9GZU2 1588 aa8.68□□□□□ -1.02
ERVFRD-3-201ENST00000578561 SEC24BO95487 1268 aa8.67□□□□□ -1.02
ERVFRD-3-201ENST00000578561 ATAD2BQ9ULI0 1458 aa8.63□□□□□ -1.03
ERVFRD-3-201ENST00000578561 PLEKHG5O94827 1062 aa8.62□□□□□ -1.03
ERVFRD-3-201ENST00000578561 IER5LQ5T953 404 aa8.62□□□□□ -1.03
ERVFRD-3-201ENST00000578561 MAP3K13O43283 966 aa8.62□□□□□ -1.03
ERVFRD-3-201ENST00000578561 TRPC6Q9Y210 931 aa8.61□□□□□ -1.03
ERVFRD-3-201ENST00000578561 COLQQ9Y215 455 aaPredicted RBP8.6□□□□□ -1.03
ERVFRD-3-201ENST00000578561 TTLL13PA6NNM8 815 aa8.59□□□□□ -1.03
ERVFRD-3-201ENST00000578561 FKBP8Q14318 412 aa8.59□□□□□ -1.03
ERVFRD-3-201ENST00000578561 FAM9AQ8IZU1 332 aaPredicted RBP8.59□□□□□ -1.03
ERVFRD-3-201ENST00000578561 ABCC8Q09428 1581 aa8.57□□□□□ -1.04
ERVFRD-3-201ENST00000578561 SLAIN1Q8ND83 568 aa8.57□□□□□ -1.04
ERVFRD-3-201ENST00000578561 SGIP1Q9BQI5 828 aa8.57□□□□□ -1.04
ERVFRD-3-201ENST00000578561 BAZ1BQ9UIG0 1483 aaKnown RBP8.55□□□□□ -1.04
ERVFRD-3-201ENST00000578561 ST18O60284 1047 aa8.55□□□□□ -1.04
ERVFRD-3-201ENST00000578561 TRIM35Q9UPQ4 493 aa8.55□□□□□ -1.04
ERVFRD-3-201ENST00000578561 PROM2Q8N271 834 aa8.54□□□□□ -1.04
ERVFRD-3-201ENST00000578561 MMRN1Q13201 1228 aa8.52□□□□□ -1.05
ERVFRD-3-201ENST00000578561 TMEM121BQ9BXQ6 578 aaPredicted RBP8.52□□□□□ -1.05
ERVFRD-3-201ENST00000578561 RASEFQ8IZ41 740 aa8.51□□□□□ -1.05
ERVFRD-3-201ENST00000578561 NCAPD3P42695 1498 aa8.51□□□□□ -1.05
ERVFRD-3-201ENST00000578561 PCGF6Q9BYE7 350 aa8.51□□□□□ -1.05
ERVFRD-3-201ENST00000578561 PLCG2P16885 1265 aa8.5□□□□□ -1.05
ERVFRD-3-201ENST00000578561 MIER1Q8N108 512 aa8.5□□□□□ -1.05
ERVFRD-3-201ENST00000578561 PCDHB13Q9Y5F0 798 aa8.5□□□□□ -1.05
ERVFRD-3-201ENST00000578561 SNPHO15079 494 aa8.49□□□□□ -1.05
ERVFRD-3-201ENST00000578561 SPNS2Q8IVW8 549 aa8.49□□□□□ -1.05
ERVFRD-3-201ENST00000578561 SOGA1O94964 1423 aa8.48□□□□□ -1.05
ERVFRD-3-201ENST00000578561 HMGXB3Q12766 1538 aa8.48□□□□□ -1.05
ERVFRD-3-201ENST00000578561 WRNQ14191 1432 aaPredicted RBP eCLIP8.47□□□□□ -1.05
ERVFRD-3-201ENST00000578561 RUSC2Q8N2Y8 1516 aa8.45□□□□□ -1.06
ERVFRD-3-201ENST00000578561 HRCP23327 699 aa8.44□□□□□ -1.06
ERVFRD-3-201ENST00000578561 SYNJ1O43426 1573 aa8.44□□□□□ -1.06
ERVFRD-3-201ENST00000578561 TMEM106CQ9BVX2 250 aa8.43□□□□□ -1.06
ERVFRD-3-201ENST00000578561 ZBTB47Q9UFB7 747 aaPredicted RBP8.43□□□□□ -1.06
ERVFRD-3-201ENST00000578561 EEA1Q15075 1411 aa8.43□□□□□ -1.06
ERVFRD-3-201ENST00000578561 TRIM26Q12899 539 aaPredicted RBP8.43□□□□□ -1.06
ERVFRD-3-201ENST00000578561 IRX5P78411 483 aaPredicted RBP8.4□□□□□ -1.06
ERVFRD-3-201ENST00000578561 IFNL1Q8IU54 200 aa8.4□□□□□ -1.06
ERVFRD-3-201ENST00000578561 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.4□□□□□ -1.06
ERVFRD-3-201ENST00000578561 PLCD3Q8N3E9 789 aa8.4□□□□□ -1.07
ERVFRD-3-201ENST00000578561 OCEL1Q9H607 264 aa8.39□□□□□ -1.07
ERVFRD-3-201ENST00000578561 TNIKQ9UKE5 1360 aa8.38□□□□□ -1.07
ERVFRD-3-201ENST00000578561 CFTRP13569 1480 aa8.38□□□□□ -1.07
ERVFRD-3-201ENST00000578561 FAM212AQ96EL1 285 aa8.36□□□□□ -1.07
ERVFRD-3-201ENST00000578561 TOP2BQ02880 1626 aa8.36□□□□□ -1.07
ERVFRD-3-201ENST00000578561 NUBP1P53384 320 aa8.35□□□□□ -1.07
ERVFRD-3-201ENST00000578561 CEP162Q5TB80 1403 aa8.35□□□□□ -1.07
ERVFRD-3-201ENST00000578561 GOLGA3Q08378 1498 aa8.34□□□□□ -1.07
ERVFRD-3-201ENST00000578561 BIVM-ERCC5R4GMW8 1640 aa8.34□□□□□ -1.07
ERVFRD-3-201ENST00000578561 MARVELD3Q96A59 401 aa8.34□□□□□ -1.07
ERVFRD-3-201ENST00000578561 CUX1P39880 1505 aa8.32□□□□□ -1.08
ERVFRD-3-201ENST00000578561 CC2D2AQ9P2K1 1620 aa8.32□□□□□ -1.08
ERVFRD-3-201ENST00000578561 CEP164Q9UPV0 1460 aa8.32□□□□□ -1.08
ERVFRD-3-201ENST00000578561 KIF21BO75037 1637 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms