RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 RUSC2Q8N2Y8 1516 aa24.21■■□□□ 1.47
UPF3AP2-202ENST00000578315 FAM69CQ0P6D2 419 aa24.18■■□□□ 1.46
UPF3AP2-202ENST00000578315 NPM1P06748 294 aaKnown RBP eCLIP24.17■■□□□ 1.46
UPF3AP2-202ENST00000578315 ABCC10Q5T3U5 1492 aa24.12■■□□□ 1.45
UPF3AP2-202ENST00000578315 ADCY10Q96PN6 1610 aa24.1■■□□□ 1.45
UPF3AP2-202ENST00000578315 MAPKBP1O60336 1514 aa24.07■■□□□ 1.44
UPF3AP2-202ENST00000578315 DIP2BQ9P265 1576 aa24.06■■□□□ 1.44
UPF3AP2-202ENST00000578315 KIAA0586Q9BVV6 1533 aa24.05■■□□□ 1.44
UPF3AP2-202ENST00000578315 IGF1RP08069 1367 aa24.04■■□□□ 1.44
UPF3AP2-202ENST00000578315 TTBK1Q5TCY1 1321 aaPredicted RBP24.01■■□□□ 1.43
UPF3AP2-202ENST00000578315 KIF27Q86VH2 1401 aa24.01■■□□□ 1.43
UPF3AP2-202ENST00000578315 CUL7Q14999 1698 aa23.98■■□□□ 1.43
UPF3AP2-202ENST00000578315 TSPOAP1O95153 1857 aa23.96■■□□□ 1.43
UPF3AP2-202ENST00000578315 KDM6BO15054 1643 aa23.95■■□□□ 1.42
UPF3AP2-202ENST00000578315 PTPRGP23470 1445 aa23.92■■□□□ 1.42
UPF3AP2-202ENST00000578315 CARMIL1Q5VZK9 1371 aa23.89■■□□□ 1.41
UPF3AP2-202ENST00000578315 KDM4FA0A1W2PPD8 638 aa23.88■■□□□ 1.41
UPF3AP2-202ENST00000578315 TNIKQ9UKE5 1360 aa23.83■■□□□ 1.41
UPF3AP2-202ENST00000578315 CARMIL2Q6F5E8 1435 aa23.83■■□□□ 1.4
UPF3AP2-202ENST00000578315 ABCC2Q92887 1545 aa23.8■■□□□ 1.4
UPF3AP2-202ENST00000578315 IQGAP2Q13576 1575 aa23.78■■□□□ 1.4
UPF3AP2-202ENST00000578315 ASXL2Q76L83 1435 aa23.78■■□□□ 1.4
UPF3AP2-202ENST00000578315 PLB1Q6P1J6 1458 aa23.73■■□□□ 1.39
UPF3AP2-202ENST00000578315 PPRC1Q5VV67 1664 aaKnown RBP23.72■■□□□ 1.39
UPF3AP2-202ENST00000578315 UACAQ9BZF9 1416 aa23.71■■□□□ 1.39
UPF3AP2-202ENST00000578315 DISP1Q96F81 1524 aa23.7■■□□□ 1.38
UPF3AP2-202ENST00000578315 GLI2P10070 1586 aa23.69■■□□□ 1.38
UPF3AP2-202ENST00000578315 UHRF1BP1LA0JNW5 1464 aa23.69■■□□□ 1.38
UPF3AP2-202ENST00000578315 EPRSP07814 1512 aaKnown RBP23.62■■□□□ 1.37
UPF3AP2-202ENST00000578315 COL17A1Q9UMD9 1497 aaPredicted RBP23.62■■□□□ 1.37
UPF3AP2-202ENST00000578315 RAPGEF2Q9Y4G8 1499 aa23.62■■□□□ 1.37
UPF3AP2-202ENST00000578315 KDM5BQ9UGL1 1544 aa23.61■■□□□ 1.37
UPF3AP2-202ENST00000578315 UGGT2Q9NYU1 1516 aa23.6■■□□□ 1.37
UPF3AP2-202ENST00000578315 ZCCHC11Q5TAX3 1644 aaKnown RBP23.6■■□□□ 1.37
UPF3AP2-202ENST00000578315 ADGRL1O94910 1474 aa23.6■■□□□ 1.37
UPF3AP2-202ENST00000578315 MAP3K4Q9Y6R4 1608 aa23.59■■□□□ 1.37
UPF3AP2-202ENST00000578315 KIAA0556O60303 1618 aa23.58■■□□□ 1.36
UPF3AP2-202ENST00000578315 TEX14Q8IWB6 1497 aa23.53■■□□□ 1.36
UPF3AP2-202ENST00000578315 ILDR1Q86SU0 546 aaPredicted RBP23.49■■□□□ 1.35
UPF3AP2-202ENST00000578315 WDR7Q9Y4E6 1490 aa23.48■■□□□ 1.35
UPF3AP2-202ENST00000578315 KCNH8Q96L42 1107 aa23.45■■□□□ 1.34
UPF3AP2-202ENST00000578315 CTTNBP2Q8WZ74 1663 aa23.44■■□□□ 1.34
UPF3AP2-202ENST00000578315 CD109Q6YHK3 1445 aa23.4■■□□□ 1.34
UPF3AP2-202ENST00000578315 GOLGA3Q08378 1498 aa23.38■■□□□ 1.33
UPF3AP2-202ENST00000578315 ABCA8O94911 1581 aa23.37■■□□□ 1.33
UPF3AP2-202ENST00000578315 HECW2Q9P2P5 1572 aa23.37■■□□□ 1.33
UPF3AP2-202ENST00000578315 CFAP43Q8NDM7 1665 aa23.35■■□□□ 1.33
UPF3AP2-202ENST00000578315 MAGI3Q5TCQ9 1506 aa23.34■■□□□ 1.33
UPF3AP2-202ENST00000578315 ARID3CA6NKF2 412 aa23.34■■□□□ 1.33
UPF3AP2-202ENST00000578315 P3H3Q8IVL6 736 aa23.3■■□□□ 1.32
UPF3AP2-202ENST00000578315 PRXQ9BXM0 1461 aa23.28■■□□□ 1.32
UPF3AP2-202ENST00000578315 KIF21BO75037 1637 aa23.24■■□□□ 1.31
UPF3AP2-202ENST00000578315 FAM9AQ8IZU1 332 aaPredicted RBP23.21■■□□□ 1.31
UPF3AP2-202ENST00000578315 ATP10BO94823 1461 aa23.21■■□□□ 1.31
UPF3AP2-202ENST00000578315 ARAP3Q8WWN8 1544 aa23.17■■□□□ 1.3
UPF3AP2-202ENST00000578315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.13■■□□□ 1.29
UPF3AP2-202ENST00000578315 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
UPF3AP2-202ENST00000578315 RAPGEF3O95398 923 aa23.12■■□□□ 1.29
UPF3AP2-202ENST00000578315 ABCA9Q8IUA7 1624 aa23.11■■□□□ 1.29
UPF3AP2-202ENST00000578315 RANGAP1P46060 587 aaPredicted RBP23.1■■□□□ 1.29
UPF3AP2-202ENST00000578315 SAMD9Q5K651 1589 aa23.08■■□□□ 1.29
UPF3AP2-202ENST00000578315 RAPGEF6Q8TEU7 1601 aa23.08■■□□□ 1.28
UPF3AP2-202ENST00000578315 CSRNP3Q8WYN3 585 aa23.07■■□□□ 1.28
UPF3AP2-202ENST00000578315 PHLDB1Q86UU1 1377 aa23.05■■□□□ 1.28
UPF3AP2-202ENST00000578315 PTPRMP28827 1452 aa23.04■■□□□ 1.28
UPF3AP2-202ENST00000578315 ADAMTSL3P82987 1691 aa23.03■■□□□ 1.28
UPF3AP2-202ENST00000578315 NEO1Q92859 1461 aa23.02■■□□□ 1.28
UPF3AP2-202ENST00000578315 ARID4BQ4LE39 1312 aaPredicted RBP23.02■■□□□ 1.28
UPF3AP2-202ENST00000578315 NUP153P49790 1475 aaKnown RBP23■■□□□ 1.27
UPF3AP2-202ENST00000578315 FRMPD1Q5SYB0 1578 aa22.99■■□□□ 1.27
UPF3AP2-202ENST00000578315 FHOD3Q2V2M9 1422 aa22.98■■□□□ 1.27
UPF3AP2-202ENST00000578315 BCORL1Q5H9F3 1711 aa22.96■■□□□ 1.27
UPF3AP2-202ENST00000578315 MADDQ8WXG6 1647 aa22.95■■□□□ 1.26
UPF3AP2-202ENST00000578315 FBXO41Q8TF61 875 aa22.93■■□□□ 1.26
UPF3AP2-202ENST00000578315 PLEKHD1A6NEE1 506 aa22.92■■□□□ 1.26
UPF3AP2-202ENST00000578315 PLPPR3Q6T4P5 718 aa22.89■■□□□ 1.25
UPF3AP2-202ENST00000578315 DENND4BO75064 1496 aaPredicted RBP22.89■■□□□ 1.25
UPF3AP2-202ENST00000578315 AKNAQ7Z591 1439 aa22.88■■□□□ 1.25
UPF3AP2-202ENST00000578315 ARHGEF40Q8TER5 1519 aa22.87■■□□□ 1.25
UPF3AP2-202ENST00000578315 RIMS1Q86UR5 1692 aaKnown RBP22.87■■□□□ 1.25
UPF3AP2-202ENST00000578315 RICTORQ6R327 1708 aa22.86■■□□□ 1.25
UPF3AP2-202ENST00000578315 PCF11O94913 1555 aaKnown RBP22.86■■□□□ 1.25
UPF3AP2-202ENST00000578315 FANCAO15360 1455 aa22.85■■□□□ 1.25
UPF3AP2-202ENST00000578315 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.85■■□□□ 1.25
UPF3AP2-202ENST00000578315 LMTK3Q96Q04 1460 aa22.85■■□□□ 1.25
UPF3AP2-202ENST00000578315 EEA1Q15075 1411 aa22.83■■□□□ 1.25
UPF3AP2-202ENST00000578315 TTC37Q6PGP7 1564 aa22.82■■□□□ 1.24
UPF3AP2-202ENST00000578315 CFAP74Q9C0B2 1584 aa22.81■■□□□ 1.24
UPF3AP2-202ENST00000578315 HSPA2P54652 639 aa22.8■■□□□ 1.24
UPF3AP2-202ENST00000578315 YEATS2Q9ULM3 1422 aa22.79■■□□□ 1.24
UPF3AP2-202ENST00000578315 CDK13Q14004 1512 aaKnown RBP22.78■■□□□ 1.24
UPF3AP2-202ENST00000578315 MLECQ14165 292 aa22.78■■□□□ 1.24
UPF3AP2-202ENST00000578315 EHMT2Q96KQ7 1210 aa22.78■■□□□ 1.24
UPF3AP2-202ENST00000578315 SIGLEC1Q9BZZ2 1709 aa22.77■■□□□ 1.24
UPF3AP2-202ENST00000578315 EFCAB5A4FU69 1503 aa22.77■■□□□ 1.24
UPF3AP2-202ENST00000578315 ZFYVE16Q7Z3T8 1539 aa22.77■■□□□ 1.24
UPF3AP2-202ENST00000578315 POGZQ7Z3K3 1410 aa22.75■■□□□ 1.23
UPF3AP2-202ENST00000578315 ATP1B4Q9UN42 357 aaPredicted RBP22.75■■□□□ 1.23
UPF3AP2-202ENST00000578315 ZMYM4Q5VZL5 1548 aa22.75■■□□□ 1.23
UPF3AP2-202ENST00000578315 HECW1Q76N89 1606 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms