RNA–Protein interactions for RNA: ENST00000577427.1

SCO1-203, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3 BASIC

Gene SCO1, Length 1,601 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-203ENST00000577427 IFT140Q96RY7 1462 aa29.8■■■□□ 2.36
SCO1-203ENST00000577427 TIAM1Q13009 1591 aa29.8■■■□□ 2.36
SCO1-203ENST00000577427 CFAP43Q8NDM7 1665 aa29.78■■■□□ 2.36
SCO1-203ENST00000577427 ADAMTS12P58397 1594 aa29.76■■■□□ 2.36
SCO1-203ENST00000577427 PCF11O94913 1555 aaKnown RBP29.75■■■□□ 2.35
SCO1-203ENST00000577427 SAMD9Q5K651 1589 aa29.73■■■□□ 2.35
SCO1-203ENST00000577427 THOC2Q8NI27 1593 aaKnown RBP29.73■■■□□ 2.35
SCO1-203ENST00000577427 CCER1Q8TC90 406 aaPredicted RBP29.73■■■□□ 2.35
SCO1-203ENST00000577427 ERCC6Q03468 1493 aa29.73■■■□□ 2.35
SCO1-203ENST00000577427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.71■■■□□ 2.35
SCO1-203ENST00000577427 GRIN2BQ13224 1484 aa29.71■■■□□ 2.35
SCO1-203ENST00000577427 AQRO60306 1485 aaKnown RBP eCLIP29.7■■■□□ 2.341e-7■■■■■ 39.7
SCO1-203ENST00000577427 FYCO1Q9BQS8 1478 aa29.69■■■□□ 2.34
SCO1-203ENST00000577427 KANK4Q5T7N3 995 aaPredicted RBP29.67■■■□□ 2.34
SCO1-203ENST00000577427 FHOD3Q2V2M9 1422 aa29.65■■■□□ 2.34
SCO1-203ENST00000577427 RRBP1Q9P2E9 1410 aaKnown RBP29.63■■■□□ 2.33
SCO1-203ENST00000577427 FMN1Q68DA7 1419 aa29.62■■■□□ 2.33
SCO1-203ENST00000577427 CASKIN1Q8WXD9 1431 aa29.61■■■□□ 2.33
SCO1-203ENST00000577427 EIF4G3O43432 1585 aaKnown RBP29.6■■■□□ 2.33
SCO1-203ENST00000577427 LRRC9Q6ZRR7 1453 aa29.58■■■□□ 2.33
SCO1-203ENST00000577427 ZNF608Q9ULD9 1512 aaPredicted RBP29.56■■■□□ 2.32
SCO1-203ENST00000577427 IQGAP2Q13576 1575 aa29.55■■■□□ 2.32
SCO1-203ENST00000577427 HNRNPUL2Q1KMD3 747 aaKnown RBP29.55■■■□□ 2.32
SCO1-203ENST00000577427 P3H3Q8IVL6 736 aa29.53■■■□□ 2.32
SCO1-203ENST00000577427 SNAPC4Q5SXM2 1469 aa29.51■■■□□ 2.31
SCO1-203ENST00000577427 CCNB3Q8WWL7 1395 aa29.47■■■□□ 2.31
SCO1-203ENST00000577427 MAGI1Q96QZ7 1491 aaPredicted RBP29.41■■■□□ 2.3
SCO1-203ENST00000577427 LRRIQ1Q96JM4 1722 aa29.41■■■□□ 2.3
SCO1-203ENST00000577427 UGGT2Q9NYU1 1516 aa29.39■■■□□ 2.3
SCO1-203ENST00000577427 GRIN2AQ12879 1464 aa29.36■■■□□ 2.29
SCO1-203ENST00000577427 ATP1B4Q9UN42 357 aaPredicted RBP29.34■■■□□ 2.29
SCO1-203ENST00000577427 HECW1Q76N89 1606 aa29.33■■■□□ 2.29
SCO1-203ENST00000577427 KIAA0586Q9BVV6 1533 aa29.32■■■□□ 2.28
SCO1-203ENST00000577427 CCDC18Q5T9S5 1454 aa29.29■■■□□ 2.28
SCO1-203ENST00000577427 PHLDB1Q86UU1 1377 aa29.29■■■□□ 2.28
SCO1-203ENST00000577427 SYNJ2O15056 1496 aa29.28■■■□□ 2.28
SCO1-203ENST00000577427 EHBP1L1Q8N3D4 1523 aa29.26■■■□□ 2.28
SCO1-203ENST00000577427 KIAA0556O60303 1618 aa29.25■■■□□ 2.27
SCO1-203ENST00000577427 SUPT6HQ7KZ85 1726 aaKnown RBP29.24■■■□□ 2.27
SCO1-203ENST00000577427 MTUS2Q5JR59 1369 aa29.2■■■□□ 2.27
SCO1-203ENST00000577427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.2■■■□□ 2.26
SCO1-203ENST00000577427 CLSPNQ9HAW4 1339 aa29.19■■■□□ 2.26
SCO1-203ENST00000577427 CEP170Q5SW79 1584 aa29.18■■■□□ 2.26
SCO1-203ENST00000577427 DISP1Q96F81 1524 aa29.15■■■□□ 2.26
SCO1-203ENST00000577427 DHX57Q6P158 1386 aaKnown RBP29.12■■■□□ 2.25
SCO1-203ENST00000577427 EPRSP07814 1512 aaKnown RBP29.1■■■□□ 2.25
SCO1-203ENST00000577427 FGD6Q6ZV73 1430 aa29.1■■■□□ 2.25
SCO1-203ENST00000577427 NCOA2Q15596 1464 aa29.1■■■□□ 2.25
SCO1-203ENST00000577427 CHMP7Q8WUX9 453 aaPredicted RBP29.09■■■□□ 2.25
SCO1-203ENST00000577427 NUP160Q12769 1436 aa29.09■■■□□ 2.25
SCO1-203ENST00000577427 ARHGEF11O15085 1522 aa29.07■■■□□ 2.24
SCO1-203ENST00000577427 RAPGEF6Q8TEU7 1601 aa29.06■■■□□ 2.24
SCO1-203ENST00000577427 MAGI3Q5TCQ9 1506 aa29.05■■■□□ 2.24
SCO1-203ENST00000577427 FAM50AQ14320 339 aaKnown RBP29.05■■■□□ 2.24
SCO1-203ENST00000577427 ITGAEP38570 1179 aa29.04■■■□□ 2.24
SCO1-203ENST00000577427 MYOM3Q5VTT5 1437 aa29.04■■■□□ 2.24
SCO1-203ENST00000577427 SETD5Q9C0A6 1442 aa29.02■■■□□ 2.24
SCO1-203ENST00000577427 RAB3GAP2Q9H2M9 1393 aa28.99■■■□□ 2.23
SCO1-203ENST00000577427 CDK13Q14004 1512 aaKnown RBP28.99■■■□□ 2.23
SCO1-203ENST00000577427 PTPN23Q9H3S7 1636 aa28.97■■■□□ 2.23
SCO1-203ENST00000577427 CARMIL2Q6F5E8 1435 aa28.95■■■□□ 2.23
SCO1-203ENST00000577427 FBLN2P98095 1184 aa28.91■■■□□ 2.22
SCO1-203ENST00000577427 NUP153P49790 1475 aaKnown RBP28.91■■■□□ 2.22
SCO1-203ENST00000577427 CHD1O14646 1710 aa28.89■■■□□ 2.22
SCO1-203ENST00000577427 TCOF1Q13428 1488 aaKnown RBP28.89■■■□□ 2.21
SCO1-203ENST00000577427 MIA2Q96PC5 1412 aa28.83■■■□□ 2.21
SCO1-203ENST00000577427 JPH4Q96JJ6 628 aa28.81■■■□□ 2.2
SCO1-203ENST00000577427 MAPKBP1O60336 1514 aa28.8■■■□□ 2.2
SCO1-203ENST00000577427 ZNF316A6NFI3 1004 aaPredicted RBP28.79■■■□□ 2.2
SCO1-203ENST00000577427 HFM1A2PYH4 1435 aa28.78■■■□□ 2.2
SCO1-203ENST00000577427 ADCY10Q96PN6 1610 aa28.77■■■□□ 2.2
SCO1-203ENST00000577427 GCC2Q8IWJ2 1684 aa28.76■■■□□ 2.19
SCO1-203ENST00000577427 CDK11AQ9UQ88 783 aaPredicted RBP28.76■■■□□ 2.19
SCO1-203ENST00000577427 ABCA8O94911 1581 aa28.75■■■□□ 2.19
SCO1-203ENST00000577427 PLB1Q6P1J6 1458 aa28.74■■■□□ 2.19
SCO1-203ENST00000577427 ITSN2Q9NZM3 1697 aa28.74■■■□□ 2.19
SCO1-203ENST00000577427 PTPRKQ15262 1439 aa28.72■■■□□ 2.19
SCO1-203ENST00000577427 TROQ12816 1431 aaPredicted RBP28.71■■■□□ 2.19
SCO1-203ENST00000577427 SHROOM2Q13796 1616 aa28.7■■■□□ 2.18
SCO1-203ENST00000577427 AKNAQ7Z591 1439 aa28.69■■■□□ 2.18
SCO1-203ENST00000577427 DIEXFQ68CQ4 756 aaKnown RBP28.67■■■□□ 2.18
SCO1-203ENST00000577427 ARID3CA6NKF2 412 aa28.66■■■□□ 2.18
SCO1-203ENST00000577427 NAIPQ13075 1403 aa28.65■■■□□ 2.18
SCO1-203ENST00000577427 PRG4Q92954 1404 aaPredicted RBP28.63■■■□□ 2.17
SCO1-203ENST00000577427 DNMT1P26358 1616 aaKnown RBP28.63■■■□□ 2.17
SCO1-203ENST00000577427 UACAQ9BZF9 1416 aa28.6■■■□□ 2.17
SCO1-203ENST00000577427 KIF14Q15058 1648 aa28.58■■■□□ 2.17
SCO1-203ENST00000577427 PTPRGP23470 1445 aa28.52■■■□□ 2.16
SCO1-203ENST00000577427 DAPK1P53355 1430 aa28.52■■■□□ 2.16
SCO1-203ENST00000577427 ATP10BO94823 1461 aa28.51■■■□□ 2.15
SCO1-203ENST00000577427 ADGBQ8N7X0 1667 aa28.5■■■□□ 2.15
SCO1-203ENST00000577427 CDC42BPAQ5VT25 1732 aa28.49■■■□□ 2.15
SCO1-203ENST00000577427 TIMELESSQ9UNS1 1208 aa28.49■■■□□ 2.15
SCO1-203ENST00000577427 ROCK1Q13464 1354 aa28.48■■■□□ 2.15
SCO1-203ENST00000577427 CROCC2H7BZ55 1655 aa28.48■■■□□ 2.15
SCO1-203ENST00000577427 CAMSAP2Q08AD1 1489 aa28.48■■■□□ 2.15
SCO1-203ENST00000577427 CLASP1Q7Z460 1538 aa28.48■■■□□ 2.15
SCO1-203ENST00000577427 GPATCH8Q9UKJ3 1502 aaKnown RBP28.48■■■□□ 2.15
SCO1-203ENST00000577427 ACIN1Q9UKV3 1341 aaKnown RBP28.46■■■□□ 2.15
SCO1-203ENST00000577427 ABCC5O15440 1437 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms