RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
NPLOC4-220ENST00000576940 NPM1P06748 294 aaKnown RBP eCLIP18.16■□□□□ 0.5
NPLOC4-220ENST00000576940 ABCC10Q5T3U5 1492 aa18.11■□□□□ 0.49
NPLOC4-220ENST00000576940 KDM4FA0A1W2PPD8 638 aa18.05■□□□□ 0.48
NPLOC4-220ENST00000576940 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
NPLOC4-220ENST00000576940 MAPKBP1O60336 1514 aa18.02■□□□□ 0.47
NPLOC4-220ENST00000576940 ADCY10Q96PN6 1610 aa18.01■□□□□ 0.47
NPLOC4-220ENST00000576940 DIP2BQ9P265 1576 aa18■□□□□ 0.47
NPLOC4-220ENST00000576940 TTBK1Q5TCY1 1321 aaPredicted RBP17.99■□□□□ 0.47
NPLOC4-220ENST00000576940 IGF1RP08069 1367 aa17.99■□□□□ 0.47
NPLOC4-220ENST00000576940 KIAA0586Q9BVV6 1533 aa17.97■□□□□ 0.47
NPLOC4-220ENST00000576940 TSPOAP1O95153 1857 aa17.96■□□□□ 0.47
NPLOC4-220ENST00000576940 KDM6BO15054 1643 aa17.95■□□□□ 0.46
NPLOC4-220ENST00000576940 PTPRGP23470 1445 aa17.91■□□□□ 0.46
NPLOC4-220ENST00000576940 KIF27Q86VH2 1401 aa17.89■□□□□ 0.45
NPLOC4-220ENST00000576940 CARMIL1Q5VZK9 1371 aa17.85■□□□□ 0.45
NPLOC4-220ENST00000576940 ILDR1Q86SU0 546 aaPredicted RBP17.84■□□□□ 0.45
NPLOC4-220ENST00000576940 TNIKQ9UKE5 1360 aa17.83■□□□□ 0.45
NPLOC4-220ENST00000576940 CUL7Q14999 1698 aa17.82■□□□□ 0.44
NPLOC4-220ENST00000576940 ASXL2Q76L83 1435 aa17.81■□□□□ 0.44
NPLOC4-220ENST00000576940 CARMIL2Q6F5E8 1435 aa17.81■□□□□ 0.44
NPLOC4-220ENST00000576940 ABCC2Q92887 1545 aa17.8■□□□□ 0.44
NPLOC4-220ENST00000576940 PLB1Q6P1J6 1458 aa17.77■□□□□ 0.44
NPLOC4-220ENST00000576940 COL17A1Q9UMD9 1497 aaPredicted RBP17.75■□□□□ 0.43
NPLOC4-220ENST00000576940 PPRC1Q5VV67 1664 aaKnown RBP17.75■□□□□ 0.43
NPLOC4-220ENST00000576940 GLI2P10070 1586 aa17.74■□□□□ 0.43
NPLOC4-220ENST00000576940 UACAQ9BZF9 1416 aa17.74■□□□□ 0.43
NPLOC4-220ENST00000576940 ADGRL1O94910 1474 aa17.73■□□□□ 0.43
NPLOC4-220ENST00000576940 UHRF1BP1LA0JNW5 1464 aa17.72■□□□□ 0.43
NPLOC4-220ENST00000576940 DISP1Q96F81 1524 aa17.71■□□□□ 0.43
NPLOC4-220ENST00000576940 IQGAP2Q13576 1575 aa17.7■□□□□ 0.42
NPLOC4-220ENST00000576940 EPRSP07814 1512 aaKnown RBP17.69■□□□□ 0.42
NPLOC4-220ENST00000576940 KDM5BQ9UGL1 1544 aa17.66■□□□□ 0.42
NPLOC4-220ENST00000576940 MAP3K4Q9Y6R4 1608 aa17.63■□□□□ 0.41
NPLOC4-220ENST00000576940 TEX14Q8IWB6 1497 aa17.61■□□□□ 0.41
NPLOC4-220ENST00000576940 ZCCHC11Q5TAX3 1644 aaKnown RBP17.61■□□□□ 0.41
NPLOC4-220ENST00000576940 KCNH8Q96L42 1107 aa17.6■□□□□ 0.41
NPLOC4-220ENST00000576940 RAPGEF2Q9Y4G8 1499 aa17.6■□□□□ 0.41
NPLOC4-220ENST00000576940 UGGT2Q9NYU1 1516 aa17.6■□□□□ 0.41
NPLOC4-220ENST00000576940 HECW2Q9P2P5 1572 aa17.57■□□□□ 0.4
NPLOC4-220ENST00000576940 KIAA0556O60303 1618 aa17.56■□□□□ 0.4
NPLOC4-220ENST00000576940 WDR7Q9Y4E6 1490 aa17.55■□□□□ 0.4
NPLOC4-220ENST00000576940 CD109Q6YHK3 1445 aa17.53■□□□□ 0.4
NPLOC4-220ENST00000576940 MAGI3Q5TCQ9 1506 aa17.47■□□□□ 0.39
NPLOC4-220ENST00000576940 ARID3CA6NKF2 412 aa17.47■□□□□ 0.39
NPLOC4-220ENST00000576940 ABCA8O94911 1581 aa17.44■□□□□ 0.38
NPLOC4-220ENST00000576940 P3H3Q8IVL6 736 aa17.43■□□□□ 0.38
NPLOC4-220ENST00000576940 CFAP43Q8NDM7 1665 aa17.42■□□□□ 0.38
NPLOC4-220ENST00000576940 GOLGA3Q08378 1498 aa17.42■□□□□ 0.38
NPLOC4-220ENST00000576940 CTTNBP2Q8WZ74 1663 aa17.39■□□□□ 0.37
NPLOC4-220ENST00000576940 KIF21BO75037 1637 aa17.39■□□□□ 0.37
NPLOC4-220ENST00000576940 RAPGEF3O95398 923 aa17.37■□□□□ 0.37
NPLOC4-220ENST00000576940 ATP10BO94823 1461 aa17.36■□□□□ 0.37
NPLOC4-220ENST00000576940 FAM9AQ8IZU1 332 aaPredicted RBP17.35■□□□□ 0.37
NPLOC4-220ENST00000576940 FBXO41Q8TF61 875 aa17.35■□□□□ 0.37
NPLOC4-220ENST00000576940 ARAP3Q8WWN8 1544 aa17.35■□□□□ 0.37
NPLOC4-220ENST00000576940 PRXQ9BXM0 1461 aa17.33■□□□□ 0.37
NPLOC4-220ENST00000576940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.31■□□□□ 0.36
NPLOC4-220ENST00000576940 HNRNPUL2Q1KMD3 747 aaKnown RBP17.31■□□□□ 0.36
NPLOC4-220ENST00000576940 PTPRMP28827 1452 aa17.3■□□□□ 0.36
NPLOC4-220ENST00000576940 ARID4BQ4LE39 1312 aaPredicted RBP17.29■□□□□ 0.36
NPLOC4-220ENST00000576940 PHLDB1Q86UU1 1377 aa17.28■□□□□ 0.36
NPLOC4-220ENST00000576940 ADAMTSL3P82987 1691 aa17.26■□□□□ 0.35
NPLOC4-220ENST00000576940 RANGAP1P46060 587 aaPredicted RBP17.25■□□□□ 0.35
NPLOC4-220ENST00000576940 ABCA9Q8IUA7 1624 aa17.25■□□□□ 0.35
NPLOC4-220ENST00000576940 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
NPLOC4-220ENST00000576940 NEO1Q92859 1461 aa17.21■□□□□ 0.35
NPLOC4-220ENST00000576940 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
NPLOC4-220ENST00000576940 BCORL1Q5H9F3 1711 aa17.18■□□□□ 0.34
NPLOC4-220ENST00000576940 HSPA2P54652 639 aa17.18■□□□□ 0.34
NPLOC4-220ENST00000576940 RAPGEF6Q8TEU7 1601 aa17.18■□□□□ 0.34
NPLOC4-220ENST00000576940 MADDQ8WXG6 1647 aa17.18■□□□□ 0.34
NPLOC4-220ENST00000576940 PLEKHD1A6NEE1 506 aa17.17■□□□□ 0.34
NPLOC4-220ENST00000576940 FRMPD1Q5SYB0 1578 aa17.17■□□□□ 0.34
NPLOC4-220ENST00000576940 SAMD9Q5K651 1589 aa17.15■□□□□ 0.34
NPLOC4-220ENST00000576940 NUP153P49790 1475 aaKnown RBP17.15■□□□□ 0.34
NPLOC4-220ENST00000576940 LMTK3Q96Q04 1460 aa17.15■□□□□ 0.34
NPLOC4-220ENST00000576940 PCF11O94913 1555 aaKnown RBP17.15■□□□□ 0.34
NPLOC4-220ENST00000576940 AKNAQ7Z591 1439 aa17.13■□□□□ 0.33
NPLOC4-220ENST00000576940 DENND4BO75064 1496 aaPredicted RBP17.12■□□□□ 0.33
NPLOC4-220ENST00000576940 FHOD3Q2V2M9 1422 aa17.12■□□□□ 0.33
NPLOC4-220ENST00000576940 MLECQ14165 292 aa17.11■□□□□ 0.33
NPLOC4-220ENST00000576940 RIMS1Q86UR5 1692 aaKnown RBP17.1■□□□□ 0.33
NPLOC4-220ENST00000576940 FANCAO15360 1455 aa17.07■□□□□ 0.32
NPLOC4-220ENST00000576940 RICTORQ6R327 1708 aa17.07■□□□□ 0.32
NPLOC4-220ENST00000576940 YEATS2Q9ULM3 1422 aa17.06■□□□□ 0.32
NPLOC4-220ENST00000576940 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.06■□□□□ 0.32
NPLOC4-220ENST00000576940 ARHGEF40Q8TER5 1519 aa17.06■□□□□ 0.32
NPLOC4-220ENST00000576940 CERKQ8TCT0 537 aa17.05■□□□□ 0.32
NPLOC4-220ENST00000576940 POGZQ7Z3K3 1410 aa17.04■□□□□ 0.32
NPLOC4-220ENST00000576940 SIGLEC1Q9BZZ2 1709 aa17.03■□□□□ 0.32
NPLOC4-220ENST00000576940 ZFYVE16Q7Z3T8 1539 aa17.01■□□□□ 0.31
NPLOC4-220ENST00000576940 CEBPAP49715 358 aaPredicted RBP17■□□□□ 0.31
NPLOC4-220ENST00000576940 TTC37Q6PGP7 1564 aa17■□□□□ 0.31
NPLOC4-220ENST00000576940 SCAPERQ9BY12 1400 aa17■□□□□ 0.31
NPLOC4-220ENST00000576940 ATP1B4Q9UN42 357 aaPredicted RBP16.99■□□□□ 0.31
NPLOC4-220ENST00000576940 HECW1Q76N89 1606 aa16.98■□□□□ 0.31
NPLOC4-220ENST00000576940 ZMYM4Q5VZL5 1548 aa16.97■□□□□ 0.31
NPLOC4-220ENST00000576940 EHMT2Q96KQ7 1210 aa16.97■□□□□ 0.31
NPLOC4-220ENST00000576940 MAGI2Q86UL8 1455 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms