RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 MYH16Q9H6N6 1097 aa13.89□□□□□ -0.19
USP6-206ENST00000575709 NOP58Q9Y2X3 529 aaKnown RBP13.86□□□□□ -0.19
USP6-206ENST00000575709 NRDCO43847 1150 aa13.84□□□□□ -0.19
USP6-206ENST00000575709 DRC7Q8IY82 874 aa13.83□□□□□ -0.2
USP6-206ENST00000575709 TAOK2Q9UL54 1235 aa13.81□□□□□ -0.2
USP6-206ENST00000575709 VSIG10Q8N0Z9 540 aa13.81□□□□□ -0.2
USP6-206ENST00000575709 SETQ01105 290 aaPredicted RBP13.8□□□□□ -0.2
USP6-206ENST00000575709 NOC3LQ8WTT2 800 aaKnown RBP13.8□□□□□ -0.2
USP6-206ENST00000575709 A0A0U1RQG5 324 aaPredicted RBP13.8□□□□□ -0.2
USP6-206ENST00000575709 L1TD1Q5T7N2 865 aaKnown RBP13.8□□□□□ -0.2
USP6-206ENST00000575709 APPP05067 770 aa13.78□□□□□ -0.2
USP6-206ENST00000575709 HSP90AA2PQ14568 343 aaPredicted RBP13.77□□□□□ -0.21
USP6-206ENST00000575709 PTMSP20962 102 aa13.77□□□□□ -0.21
USP6-206ENST00000575709 TMC1Q8TDI8 760 aa13.76□□□□□ -0.21
USP6-206ENST00000575709 DDX10Q13206 875 aaKnown RBP13.76□□□□□ -0.21
USP6-206ENST00000575709 CASC1Q6TDU7 716 aa13.75□□□□□ -0.21
USP6-206ENST00000575709 GOLGA6L1Q8N7Z2 621 aa13.75□□□□□ -0.21
USP6-206ENST00000575709 HSP90AB1P08238 724 aaKnown RBP13.74□□□□□ -0.21
USP6-206ENST00000575709 PNNQ9H307 717 aaKnown RBP13.72□□□□□ -0.21
USP6-206ENST00000575709 WDR43Q15061 677 aaKnown RBP eCLIP13.72□□□□□ -0.21
USP6-206ENST00000575709 PATL2C9JE40 543 aaKnown RBP13.69□□□□□ -0.22
USP6-206ENST00000575709 CLSTN1O94985 981 aa13.69□□□□□ -0.22
USP6-206ENST00000575709 PRM3Q9NNZ6 103 aa13.66□□□□□ -0.22
USP6-206ENST00000575709 KIAA2012Q0VF49 1180 aa13.66□□□□□ -0.22
USP6-206ENST00000575709 PODXL2Q9NZ53 605 aa13.65□□□□□ -0.22
USP6-206ENST00000575709 SPRYD3Q8NCJ5 442 aa13.65□□□□□ -0.23
USP6-206ENST00000575709 TAF7LQ5H9L4 462 aa13.64□□□□□ -0.23
USP6-206ENST00000575709 MRS2Q9HD23 443 aa13.64□□□□□ -0.23
USP6-206ENST00000575709 GOLGA6L4A6NEF3 574 aa13.63□□□□□ -0.23
USP6-206ENST00000575709 ZNF771Q7L3S4 317 aaPredicted RBP13.62□□□□□ -0.23
USP6-206ENST00000575709 GZF1Q9H116 711 aaPredicted RBP13.61□□□□□ -0.23
USP6-206ENST00000575709 NAP1L2Q9ULW6 460 aaPredicted RBP13.61□□□□□ -0.23
USP6-206ENST00000575709 PDE4CQ08493 712 aa13.59□□□□□ -0.23
USP6-206ENST00000575709 MIER1Q8N108 512 aa13.58□□□□□ -0.24
USP6-206ENST00000575709 CSRNP3Q8WYN3 585 aa13.58□□□□□ -0.24
USP6-206ENST00000575709 RSPH6AQ9H0K4 717 aa13.58□□□□□ -0.24
USP6-206ENST00000575709 TONSLQ96HA7 1378 aa13.58□□□□□ -0.24
USP6-206ENST00000575709 TIMELESSQ9UNS1 1208 aa13.58□□□□□ -0.24
USP6-206ENST00000575709 RGS3P49796 1198 aa13.57□□□□□ -0.24
USP6-206ENST00000575709 HSCBQ8IWL3 235 aa13.57□□□□□ -0.24
USP6-206ENST00000575709 SUPT16HQ9Y5B9 1047 aaKnown RBP13.57□□□□□ -0.24
USP6-206ENST00000575709 FGD1P98174 961 aa13.56□□□□□ -0.24
USP6-206ENST00000575709 A0A0G2JS52 829 aa13.56□□□□□ -0.24
USP6-206ENST00000575709 FTSJ3Q8IY81 847 aaKnown RBP13.53□□□□□ -0.24
USP6-206ENST00000575709 PKNOX2Q96KN3 472 aa13.53□□□□□ -0.24
USP6-206ENST00000575709 SENP3-EIF4A1A0A087X0R7 540 aa13.52□□□□□ -0.24
USP6-206ENST00000575709 FBXO3Q9UK99 471 aa13.52□□□□□ -0.25
USP6-206ENST00000575709 USP35Q9P2H5 1018 aa13.52□□□□□ -0.25
USP6-206ENST00000575709 KCNJ4P48050 445 aa13.49□□□□□ -0.25
USP6-206ENST00000575709 RRP12Q5JTH9 1297 aaKnown RBP13.48□□□□□ -0.25
USP6-206ENST00000575709 GOLGA6L3A6NEY3 463 aa13.46□□□□□ -0.25
USP6-206ENST00000575709 CHGAP10645 457 aaKnown RBP13.45□□□□□ -0.26
USP6-206ENST00000575709 MEX3CQ5U5Q3 659 aaKnown RBP13.44□□□□□ -0.26
USP6-206ENST00000575709 PPP4R2Q9NY27 417 aa13.44□□□□□ -0.26
USP6-206ENST00000575709 RBM19Q9Y4C8 960 aaKnown RBP13.44□□□□□ -0.26
USP6-206ENST00000575709 B4GALNT3Q6L9W6 998 aa13.43□□□□□ -0.26
USP6-206ENST00000575709 GNL2Q13823 731 aaKnown RBP13.43□□□□□ -0.26
USP6-206ENST00000575709 GBP4Q96PP9 640 aa13.43□□□□□ -0.26
USP6-206ENST00000575709 STK11IPQ8N1F8 1099 aa13.42□□□□□ -0.26
USP6-206ENST00000575709 HIRIP3Q9BW71 556 aaPredicted RBP13.42□□□□□ -0.26
USP6-206ENST00000575709 ANO8Q9HCE9 1232 aaPredicted RBP13.42□□□□□ -0.26
USP6-206ENST00000575709 STAG3Q9UJ98 1225 aa13.41□□□□□ -0.26
USP6-206ENST00000575709 NOM1Q5C9Z4 860 aaKnown RBP13.41□□□□□ -0.26
USP6-206ENST00000575709 TPM4P67936 248 aa13.4□□□□□ -0.26
USP6-206ENST00000575709 CCAR2Q8N163 923 aaKnown RBP13.39□□□□□ -0.27
USP6-206ENST00000575709 MAP7D2Q96T17 732 aa13.39□□□□□ -0.27
USP6-206ENST00000575709 SYAP1Q96A49 352 aaPredicted RBP13.39□□□□□ -0.27
USP6-206ENST00000575709 TEX35Q5T0J7 233 aa13.38□□□□□ -0.27
USP6-206ENST00000575709 ZNF777Q9ULD5 760 aaPredicted RBP13.38□□□□□ -0.27
USP6-206ENST00000575709 GPS2Q13227 327 aa13.37□□□□□ -0.27
USP6-206ENST00000575709 PLEKHG5O94827 1062 aa13.37□□□□□ -0.27
USP6-206ENST00000575709 OS9Q13438 667 aaPredicted RBP13.37□□□□□ -0.27
USP6-206ENST00000575709 PLPPR3Q6T4P5 718 aa13.37□□□□□ -0.27
USP6-206ENST00000575709 SLKQ9H2G2 1235 aaPredicted RBP13.37□□□□□ -0.27
USP6-206ENST00000575709 ARID3CA6NKF2 412 aa13.36□□□□□ -0.27
USP6-206ENST00000575709 MCCP23508 829 aa13.36□□□□□ -0.27
USP6-206ENST00000575709 FAM13BQ9NYF5 915 aa13.36□□□□□ -0.27
USP6-206ENST00000575709 HTATSF1O43719 755 aaKnown RBP13.36□□□□□ -0.27
USP6-206ENST00000575709 CREBRFQ8IUR6 639 aa13.36□□□□□ -0.27
USP6-206ENST00000575709 FRAT1Q92837 279 aaPredicted RBP13.35□□□□□ -0.27
USP6-206ENST00000575709 PLCD4Q9BRC7 762 aa13.34□□□□□ -0.27
USP6-206ENST00000575709 TPM3P06753 285 aa13.33□□□□□ -0.28
USP6-206ENST00000575709 KDM2AQ9Y2K7 1162 aa13.31□□□□□ -0.28
USP6-206ENST00000575709 RDXP35241 583 aaKnown RBP13.31□□□□□ -0.28
USP6-206ENST00000575709 CEP89Q96ST8 783 aa13.3□□□□□ -0.28
USP6-206ENST00000575709 HSP90B1P14625 803 aaKnown RBP13.29□□□□□ -0.28
USP6-206ENST00000575709 GOLGA2Q08379 1002 aa13.29□□□□□ -0.28
USP6-206ENST00000575709 HSP90AB3PQ58FF7 597 aa13.29□□□□□ -0.28
USP6-206ENST00000575709 ISY1Q9ULR0 285 aaKnown RBP13.29□□□□□ -0.28
USP6-206ENST00000575709 PRKCSHP14314 528 aaPredicted RBP13.29□□□□□ -0.28
USP6-206ENST00000575709 ZNF592Q92610 1267 aa13.29□□□□□ -0.28
USP6-206ENST00000575709 ESF1Q9H501 851 aaKnown RBP13.28□□□□□ -0.28
USP6-206ENST00000575709 CCDC70Q6NSX1 233 aa13.27□□□□□ -0.29
USP6-206ENST00000575709 CALD1Q05682 793 aaKnown RBP13.27□□□□□ -0.29
USP6-206ENST00000575709 C14orf37Q86TY3 774 aa13.27□□□□□ -0.29
USP6-206ENST00000575709 NEUROD2Q15784 382 aa13.26□□□□□ -0.29
USP6-206ENST00000575709 PHF14O94880 888 aa13.26□□□□□ -0.29
USP6-206ENST00000575709 CCDC191Q8NCU4 936 aa13.26□□□□□ -0.29
USP6-206ENST00000575709 P3H3Q8IVL6 736 aa13.25□□□□□ -0.29
USP6-206ENST00000575709 MAPK8IP2Q13387 824 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms