RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 AQRO60306 1485 aaKnown RBP eCLIP10.31□□□□□ -0.76
SMG6-217ENST00000575338 GRIN2BQ13224 1484 aa10.31□□□□□ -0.76
SMG6-217ENST00000575338 FMN1Q68DA7 1419 aa10.31□□□□□ -0.76
SMG6-217ENST00000575338 ADAMTS12P58397 1594 aa10.31□□□□□ -0.76
SMG6-217ENST00000575338 TIAM1Q13009 1591 aa10.31□□□□□ -0.76
SMG6-217ENST00000575338 RANGAP1P46060 587 aaPredicted RBP10.3□□□□□ -0.76
SMG6-217ENST00000575338 SAMD9Q5K651 1589 aa10.3□□□□□ -0.76
SMG6-217ENST00000575338 THOC2Q8NI27 1593 aaKnown RBP10.3□□□□□ -0.76
SMG6-217ENST00000575338 FYCO1Q9BQS8 1478 aa10.3□□□□□ -0.76
SMG6-217ENST00000575338 TDRD9Q8NDG6 1382 aaKnown RBP10.29□□□□□ -0.76
SMG6-217ENST00000575338 DNAJC5Q9H3Z4 198 aa10.27□□□□□ -0.77
SMG6-217ENST00000575338 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
SMG6-217ENST00000575338 PCF11O94913 1555 aaKnown RBP10.26□□□□□ -0.77
SMG6-217ENST00000575338 IQGAP2Q13576 1575 aa10.26□□□□□ -0.77
SMG6-217ENST00000575338 CASKIN1Q8WXD9 1431 aa10.25□□□□□ -0.77
SMG6-217ENST00000575338 CCER1Q8TC90 406 aaPredicted RBP10.25□□□□□ -0.77
SMG6-217ENST00000575338 TTBK1Q5TCY1 1321 aaPredicted RBP10.24□□□□□ -0.77
SMG6-217ENST00000575338 RRBP1Q9P2E9 1410 aaKnown RBP10.24□□□□□ -0.77
SMG6-217ENST00000575338 MAGI1Q96QZ7 1491 aaPredicted RBP10.23□□□□□ -0.77
SMG6-217ENST00000575338 LRRC9Q6ZRR7 1453 aa10.22□□□□□ -0.77
SMG6-217ENST00000575338 HECW1Q76N89 1606 aa10.21□□□□□ -0.78
SMG6-217ENST00000575338 FHOD3Q2V2M9 1422 aa10.2□□□□□ -0.78
SMG6-217ENST00000575338 CCDC18Q5T9S5 1454 aa10.2□□□□□ -0.78
SMG6-217ENST00000575338 UGGT2Q9NYU1 1516 aa10.19□□□□□ -0.78
SMG6-217ENST00000575338 CCNB3Q8WWL7 1395 aa10.18□□□□□ -0.78
SMG6-217ENST00000575338 KIAA0586Q9BVV6 1533 aa10.17□□□□□ -0.78
SMG6-217ENST00000575338 GRIN2AQ12879 1464 aa10.17□□□□□ -0.78
SMG6-217ENST00000575338 SNAPC4Q5SXM2 1469 aa10.17□□□□□ -0.78
SMG6-217ENST00000575338 CLSPNQ9HAW4 1339 aa10.17□□□□□ -0.78
SMG6-217ENST00000575338 SUPT6HQ7KZ85 1726 aaKnown RBP10.17□□□□□ -0.78
SMG6-217ENST00000575338 EHBP1L1Q8N3D4 1523 aa10.17□□□□□ -0.78
SMG6-217ENST00000575338 SYNJ2O15056 1496 aa10.17□□□□□ -0.78
SMG6-217ENST00000575338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.16□□□□□ -0.78
SMG6-217ENST00000575338 ZNF608Q9ULD9 1512 aaPredicted RBP10.16□□□□□ -0.78
SMG6-217ENST00000575338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.15□□□□□ -0.78
SMG6-217ENST00000575338 KANK4Q5T7N3 995 aaPredicted RBP10.15□□□□□ -0.78
SMG6-217ENST00000575338 KIAA0556O60303 1618 aa10.14□□□□□ -0.79
SMG6-217ENST00000575338 LRRIQ1Q96JM4 1722 aa10.13□□□□□ -0.79
SMG6-217ENST00000575338 HNRNPUL2Q1KMD3 747 aaKnown RBP10.13□□□□□ -0.79
SMG6-217ENST00000575338 P3H3Q8IVL6 736 aa10.12□□□□□ -0.79
SMG6-217ENST00000575338 ATP1B4Q9UN42 357 aaPredicted RBP10.12□□□□□ -0.79
SMG6-217ENST00000575338 MTUS2Q5JR59 1369 aa10.12□□□□□ -0.79
SMG6-217ENST00000575338 CARMIL2Q6F5E8 1435 aa10.1□□□□□ -0.79
SMG6-217ENST00000575338 CHMP7Q8WUX9 453 aaPredicted RBP10.09□□□□□ -0.79
SMG6-217ENST00000575338 RAPGEF6Q8TEU7 1601 aa10.08□□□□□ -0.8
SMG6-217ENST00000575338 CEP170Q5SW79 1584 aa10.07□□□□□ -0.8
SMG6-217ENST00000575338 EPRSP07814 1512 aaKnown RBP10.07□□□□□ -0.8
SMG6-217ENST00000575338 NUP160Q12769 1436 aa10.07□□□□□ -0.8
SMG6-217ENST00000575338 ACIN1Q9UKV3 1341 aaKnown RBP10.06□□□□□ -0.8
SMG6-217ENST00000575338 PHLDB1Q86UU1 1377 aa10.05□□□□□ -0.8
SMG6-217ENST00000575338 CDK11AQ9UQ88 783 aaPredicted RBP10.05□□□□□ -0.8
SMG6-217ENST00000575338 DISP1Q96F81 1524 aa10.05□□□□□ -0.8
SMG6-217ENST00000575338 FGD6Q6ZV73 1430 aa10.05□□□□□ -0.8
SMG6-217ENST00000575338 NCOA2Q15596 1464 aa10.04□□□□□ -0.8
SMG6-217ENST00000575338 MYOM3Q5VTT5 1437 aa10.04□□□□□ -0.8
SMG6-217ENST00000575338 ARHGEF11O15085 1522 aa10.03□□□□□ -0.8
SMG6-217ENST00000575338 ITSN2Q9NZM3 1697 aa10.03□□□□□ -0.8
SMG6-217ENST00000575338 SETD5Q9C0A6 1442 aa10.03□□□□□ -0.8
SMG6-217ENST00000575338 PTPN23Q9H3S7 1636 aa10.03□□□□□ -0.8
SMG6-217ENST00000575338 CHD1O14646 1710 aa10.02□□□□□ -0.8
SMG6-217ENST00000575338 MIA2Q96PC5 1412 aa10.02□□□□□ -0.81
SMG6-217ENST00000575338 FAM50AQ14320 339 aaKnown RBP10.01□□□□□ -0.81
SMG6-217ENST00000575338 DHX57Q6P158 1386 aaKnown RBP10.01□□□□□ -0.81
SMG6-217ENST00000575338 ADCY10Q96PN6 1610 aa10□□□□□ -0.81
SMG6-217ENST00000575338 TCOF1Q13428 1488 aaKnown RBP9.99□□□□□ -0.81
SMG6-217ENST00000575338 FBLN2P98095 1184 aa9.99□□□□□ -0.81
SMG6-217ENST00000575338 GCC2Q8IWJ2 1684 aa9.99□□□□□ -0.81
SMG6-217ENST00000575338 RAB3GAP2Q9H2M9 1393 aa9.99□□□□□ -0.81
SMG6-217ENST00000575338 AKNAQ7Z591 1439 aa9.98□□□□□ -0.81
SMG6-217ENST00000575338 ITGAEP38570 1179 aa9.97□□□□□ -0.81
SMG6-217ENST00000575338 JPH4Q96JJ6 628 aa9.97□□□□□ -0.81
SMG6-217ENST00000575338 NUP153P49790 1475 aaKnown RBP9.97□□□□□ -0.81
SMG6-217ENST00000575338 CDK13Q14004 1512 aaKnown RBP9.97□□□□□ -0.81
SMG6-217ENST00000575338 SHROOM2Q13796 1616 aa9.96□□□□□ -0.81
SMG6-217ENST00000575338 MAGI3Q5TCQ9 1506 aa9.96□□□□□ -0.82
SMG6-217ENST00000575338 HFM1A2PYH4 1435 aa9.95□□□□□ -0.82
SMG6-217ENST00000575338 ABCA8O94911 1581 aa9.95□□□□□ -0.82
SMG6-217ENST00000575338 KIF14Q15058 1648 aa9.94□□□□□ -0.82
SMG6-217ENST00000575338 TROQ12816 1431 aaPredicted RBP9.94□□□□□ -0.82
SMG6-217ENST00000575338 TIMELESSQ9UNS1 1208 aa9.94□□□□□ -0.82
SMG6-217ENST00000575338 ADGBQ8N7X0 1667 aa9.93□□□□□ -0.82
SMG6-217ENST00000575338 DNMT1P26358 1616 aaKnown RBP9.93□□□□□ -0.82
SMG6-217ENST00000575338 ZNF316A6NFI3 1004 aaPredicted RBP9.92□□□□□ -0.82
SMG6-217ENST00000575338 PRG4Q92954 1404 aaPredicted RBP9.9□□□□□ -0.82
SMG6-217ENST00000575338 UACAQ9BZF9 1416 aa9.9□□□□□ -0.82
SMG6-217ENST00000575338 PLB1Q6P1J6 1458 aa9.9□□□□□ -0.83
SMG6-217ENST00000575338 CROCC2H7BZ55 1655 aa9.89□□□□□ -0.83
SMG6-217ENST00000575338 PTPRGP23470 1445 aa9.89□□□□□ -0.83
SMG6-217ENST00000575338 ROCK1Q13464 1354 aa9.88□□□□□ -0.83
SMG6-217ENST00000575338 MAPKBP1O60336 1514 aa9.88□□□□□ -0.83
SMG6-217ENST00000575338 CDC42BPAQ5VT25 1732 aa9.88□□□□□ -0.83
SMG6-217ENST00000575338 PLEKHD1A6NEE1 506 aa9.88□□□□□ -0.83
SMG6-217ENST00000575338 NAIPQ13075 1403 aa9.88□□□□□ -0.83
SMG6-217ENST00000575338 CLASP1Q7Z460 1538 aa9.87□□□□□ -0.83
SMG6-217ENST00000575338 DIEXFQ68CQ4 756 aaKnown RBP9.86□□□□□ -0.83
SMG6-217ENST00000575338 DAPK1P53355 1430 aa9.85□□□□□ -0.83
SMG6-217ENST00000575338 CAMSAP2Q08AD1 1489 aa9.85□□□□□ -0.83
SMG6-217ENST00000575338 ABCC2Q92887 1545 aa9.84□□□□□ -0.83
SMG6-217ENST00000575338 ATP10BO94823 1461 aa9.84□□□□□ -0.83
SMG6-217ENST00000575338 GPATCH8Q9UKJ3 1502 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms