RNA–Protein interactions for RNA: ENST00000573992.5

EDC4-207, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 1 (best)

Gene EDC4, Length 3,934 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-207ENST00000573992 SALL2Q9Y467 1007 aaPredicted RBP15.61■□□□□ 0.09
EDC4-207ENST00000573992 LAS1LQ9Y4W2 734 aaKnown RBP15.59■□□□□ 0.09
EDC4-207ENST00000573992 PPM1GO15355 546 aaPredicted RBP15.59■□□□□ 0.09
EDC4-207ENST00000573992 MRS2Q9HD23 443 aa15.59■□□□□ 0.09
EDC4-207ENST00000573992 VPS8Q8N3P4 1428 aa15.58■□□□□ 0.08
EDC4-207ENST00000573992 SIN3AQ96ST3 1273 aa15.57■□□□□ 0.08
EDC4-207ENST00000573992 IPO9Q96P70 1041 aaKnown RBP15.56■□□□□ 0.08
EDC4-207ENST00000573992 CCDC88BA6NC98 1476 aa15.56■□□□□ 0.08
EDC4-207ENST00000573992 CEP164Q9UPV0 1460 aa15.56■□□□□ 0.08
EDC4-207ENST00000573992 MROH2BQ7Z745 1585 aa15.5■□□□□ 0.07
EDC4-207ENST00000573992 TIMELESSQ9UNS1 1208 aa15.49■□□□□ 0.07
EDC4-207ENST00000573992 IL27Q8NEV9 243 aa15.48■□□□□ 0.07
EDC4-207ENST00000573992 CCNB3Q8WWL7 1395 aa15.47■□□□□ 0.07
EDC4-207ENST00000573992 ABCC8Q09428 1581 aa15.47■□□□□ 0.07
EDC4-207ENST00000573992 DDRGK1Q96HY6 314 aa15.46■□□□□ 0.07
EDC4-207ENST00000573992 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
EDC4-207ENST00000573992 USP35Q9P2H5 1018 aa15.43■□□□□ 0.06
EDC4-207ENST00000573992 UNC13AQ9UPW8 1703 aa15.42■□□□□ 0.06
EDC4-207ENST00000573992 KANK4Q5T7N3 995 aaPredicted RBP15.41■□□□□ 0.06
EDC4-207ENST00000573992 WIZO95785 1651 aa15.4■□□□□ 0.06
EDC4-207ENST00000573992 RAB3GAP2Q9H2M9 1393 aa15.4■□□□□ 0.06
EDC4-207ENST00000573992 EIF4G2P78344 907 aaKnown RBP eCLIP15.39■□□□□ 0.05
EDC4-207ENST00000573992 PPP1R15AO75807 674 aaPredicted RBP15.39■□□□□ 0.05
EDC4-207ENST00000573992 UBE2Q2Q8WVN8 375 aa15.35■□□□□ 0.05
EDC4-207ENST00000573992 RUSC2Q8N2Y8 1516 aa15.34■□□□□ 0.05
EDC4-207ENST00000573992 SETD5Q9C0A6 1442 aa15.34■□□□□ 0.05
EDC4-207ENST00000573992 RSPH6AQ9H0K4 717 aa15.33■□□□□ 0.05
EDC4-207ENST00000573992 TMC1Q8TDI8 760 aa15.33■□□□□ 0.04
EDC4-207ENST00000573992 BICRAQ9NZM4 1560 aa15.3■□□□□ 0.04
EDC4-207ENST00000573992 ARXQ96QS3 562 aa15.3■□□□□ 0.04
EDC4-207ENST00000573992 GSE1Q14687 1217 aa15.3■□□□□ 0.04
EDC4-207ENST00000573992 NAP1L5Q96NT1 182 aaPredicted RBP15.3■□□□□ 0.04
EDC4-207ENST00000573992 SENP3-EIF4A1A0A087X0R7 540 aa15.29■□□□□ 0.04
EDC4-207ENST00000573992 TCERG1O14776 1098 aaKnown RBP15.29■□□□□ 0.04
EDC4-207ENST00000573992 P3H3Q8IVL6 736 aa15.28■□□□□ 0.04
EDC4-207ENST00000573992 ZNF326Q5BKZ1 582 aaKnown RBP15.27■□□□□ 0.04
EDC4-207ENST00000573992 PKNOX2Q96KN3 472 aa15.25■□□□□ 0.03
EDC4-207ENST00000573992 BRPF3Q9ULD4 1205 aa15.24■□□□□ 0.03
EDC4-207ENST00000573992 ZBED9Q6R2W3 1325 aa15.23■□□□□ 0.03
EDC4-207ENST00000573992 HSPA5P11021 654 aaKnown RBP15.22■□□□□ 0.03
EDC4-207ENST00000573992 VSIG10Q8N0Z9 540 aa15.22■□□□□ 0.03
EDC4-207ENST00000573992 BAZ1AQ9NRL2 1556 aaPredicted RBP15.22■□□□□ 0.03
EDC4-207ENST00000573992 NUDCQ9Y266 331 aa15.21■□□□□ 0.03
EDC4-207ENST00000573992 PDE4AP27815 886 aa15.2■□□□□ 0.02
EDC4-207ENST00000573992 BAZ1BQ9UIG0 1483 aaKnown RBP15.17■□□□□ 0.02
EDC4-207ENST00000573992 RAPGEF2Q9Y4G8 1499 aa15.17■□□□□ 0.02
EDC4-207ENST00000573992 HSP90AA1P07900 732 aaKnown RBP15.17■□□□□ 0.02
EDC4-207ENST00000573992 PNNQ9H307 717 aaKnown RBP15.15■□□□□ 0.02
EDC4-207ENST00000573992 L1TD1Q5T7N2 865 aaKnown RBP15.15■□□□□ 0.02
EDC4-207ENST00000573992 BECN1Q14457 450 aa15.14■□□□□ 0.01
EDC4-207ENST00000573992 PRKRIP1Q9H875 184 aaPredicted RBP15.14■□□□□ 0.01
EDC4-207ENST00000573992 UPF2Q9HAU5 1272 aaKnown RBP15.14■□□□□ 0.01
EDC4-207ENST00000573992 SMARCA4P51532 1647 aa15.13■□□□□ 0.01
EDC4-207ENST00000573992 HSP90AA2PQ14568 343 aaPredicted RBP15.13■□□□□ 0.01
EDC4-207ENST00000573992 NFKBIBQ15653 356 aa15.11■□□□□ 0.01
EDC4-207ENST00000573992 TRIM44Q96DX7 344 aaPredicted RBP15.1■□□□□ 0.01
EDC4-207ENST00000573992 ANP32BQ92688 251 aaKnown RBP15.1■□□□□ 0.01
EDC4-207ENST00000573992 CHIC2Q9UKJ5 165 aa15.1■□□□□ 0.01
EDC4-207ENST00000573992 WDR97A6NE52 1622 aa15.09■□□□□ 0.01
EDC4-207ENST00000573992 KIF21BO75037 1637 aa15.09■□□□□ 0.01
EDC4-207ENST00000573992 FRAT1Q92837 279 aaPredicted RBP15.09■□□□□ 0.01
EDC4-207ENST00000573992 RRBP1Q9P2E9 1410 aaKnown RBP15.09■□□□□ 0.01
EDC4-207ENST00000573992 MS4A1P11836 297 aa15.09■□□□□ 0.01
EDC4-207ENST00000573992 SLC4A3P48751 1232 aa15.08■□□□□ 0.01
EDC4-207ENST00000573992 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.08■□□□□ 0
EDC4-207ENST00000573992 RCAN3Q9UKA8 241 aa15.07■□□□□ 0
EDC4-207ENST00000573992 FAM43AQ8N2R8 423 aa15.06■□□□□ 0
EDC4-207ENST00000573992 TOP2AP11388 1531 aaKnown RBP15.06■□□□□ 0
EDC4-207ENST00000573992 RRP7BPQ9NSQ0 103 aa15.06■□□□□ 0
EDC4-207ENST00000573992 CANXP27824 592 aaKnown RBP15.05■□□□□ 0
EDC4-207ENST00000573992 RGS3P49796 1198 aa15.05■□□□□ 0
EDC4-207ENST00000573992 C11orf95C9JLR9 678 aaPredicted RBP15.03■□□□□ -0
EDC4-207ENST00000573992 EXOC6Q8TAG9 804 aa15.03■□□□□ -0
EDC4-207ENST00000573992 MTUS2Q5JR59 1369 aa15.03■□□□□ -0
EDC4-207ENST00000573992 WASHC2AQ641Q2 1341 aa15.02□□□□□ -0.01
EDC4-207ENST00000573992 KIF27Q86VH2 1401 aa15□□□□□ -0.01
EDC4-207ENST00000573992 CCDC184Q52MB2 194 aa15□□□□□ -0.01
EDC4-207ENST00000573992 ARID4BQ4LE39 1312 aaPredicted RBP15□□□□□ -0.01
EDC4-207ENST00000573992 RRP1P56182 461 aaKnown RBP14.99□□□□□ -0.01
EDC4-207ENST00000573992 BACH2Q9BYV9 841 aa14.99□□□□□ -0.01
EDC4-207ENST00000573992 AKNAQ7Z591 1439 aa14.99□□□□□ -0.01
EDC4-207ENST00000573992 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
EDC4-207ENST00000573992 SLKQ9H2G2 1235 aaPredicted RBP14.96□□□□□ -0.02
EDC4-207ENST00000573992 CNTLNQ9NXG0 1405 aa14.95□□□□□ -0.02
EDC4-207ENST00000573992 GOLGA6L3A6NEY3 463 aa14.95□□□□□ -0.02
EDC4-207ENST00000573992 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
EDC4-207ENST00000573992 FHAD1B1AJZ9 1412 aa14.94□□□□□ -0.02
EDC4-207ENST00000573992 WASHC2CQ9Y4E1 1318 aa14.94□□□□□ -0.02
EDC4-207ENST00000573992 ARHGAP35Q9NRY4 1499 aa14.93□□□□□ -0.02
EDC4-207ENST00000573992 FRAT2O75474 233 aaPredicted RBP14.93□□□□□ -0.02
EDC4-207ENST00000573992 SLC4A1APQ9BWU0 796 aaKnown RBP14.93□□□□□ -0.02
EDC4-207ENST00000573992 EIF4G1Q04637 1599 aaKnown RBP14.93□□□□□ -0.02
EDC4-207ENST00000573992 GZF1Q9H116 711 aaPredicted RBP14.92□□□□□ -0.02
EDC4-207ENST00000573992 L3MBTL2Q969R5 705 aa14.92□□□□□ -0.02
EDC4-207ENST00000573992 SMG6Q86US8 1419 aaKnown RBP14.92□□□□□ -0.02
EDC4-207ENST00000573992 FAM161AQ3B820 660 aa14.91□□□□□ -0.02
EDC4-207ENST00000573992 PODXL2Q9NZ53 605 aa14.91□□□□□ -0.02
EDC4-207ENST00000573992 ZMYND15Q9H091 742 aa14.9□□□□□ -0.02
EDC4-207ENST00000573992 CCDC7Q96M83 1385 aa14.9□□□□□ -0.02
EDC4-207ENST00000573992 PDE3BQ13370 1112 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms