RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 KIF13AQ9H1H9 1805 aa23.87■■□□□ 1.41
RPAIN-209ENST00000571558 NPM1P06748 294 aaKnown RBP eCLIP23.84■■□□□ 1.41
RPAIN-209ENST00000571558 ABCC10Q5T3U5 1492 aa23.82■■□□□ 1.4
RPAIN-209ENST00000571558 FAM69CQ0P6D2 419 aa23.8■■□□□ 1.4
RPAIN-209ENST00000571558 MAPKBP1O60336 1514 aa23.78■■□□□ 1.4
RPAIN-209ENST00000571558 RUSC2Q8N2Y8 1516 aa23.71■■□□□ 1.39
RPAIN-209ENST00000571558 DIP2BQ9P265 1576 aa23.68■■□□□ 1.38
RPAIN-209ENST00000571558 KIAA0586Q9BVV6 1533 aa23.63■■□□□ 1.37
RPAIN-209ENST00000571558 ADCY10Q96PN6 1610 aa23.63■■□□□ 1.37
RPAIN-209ENST00000571558 KDM6BO15054 1643 aa23.6■■□□□ 1.37
RPAIN-209ENST00000571558 KDM4FA0A1W2PPD8 638 aa23.59■■□□□ 1.37
RPAIN-209ENST00000571558 IGF1RP08069 1367 aa23.52■■□□□ 1.36
RPAIN-209ENST00000571558 PTPRGP23470 1445 aa23.5■■□□□ 1.35
RPAIN-209ENST00000571558 KIF27Q86VH2 1401 aa23.49■■□□□ 1.35
RPAIN-209ENST00000571558 CUL7Q14999 1698 aa23.48■■□□□ 1.35
RPAIN-209ENST00000571558 CARMIL2Q6F5E8 1435 aa23.44■■□□□ 1.34
RPAIN-209ENST00000571558 TSPOAP1O95153 1857 aa23.42■■□□□ 1.34
RPAIN-209ENST00000571558 ABCC2Q92887 1545 aa23.42■■□□□ 1.34
RPAIN-209ENST00000571558 PLB1Q6P1J6 1458 aa23.42■■□□□ 1.34
RPAIN-209ENST00000571558 TNIKQ9UKE5 1360 aa23.41■■□□□ 1.34
RPAIN-209ENST00000571558 GLI2P10070 1586 aa23.39■■□□□ 1.33
RPAIN-209ENST00000571558 ASXL2Q76L83 1435 aa23.36■■□□□ 1.33
RPAIN-209ENST00000571558 UHRF1BP1LA0JNW5 1464 aa23.36■■□□□ 1.33
RPAIN-209ENST00000571558 CARMIL1Q5VZK9 1371 aa23.36■■□□□ 1.33
RPAIN-209ENST00000571558 ILDR1Q86SU0 546 aaPredicted RBP23.34■■□□□ 1.33
RPAIN-209ENST00000571558 UACAQ9BZF9 1416 aa23.3■■□□□ 1.32
RPAIN-209ENST00000571558 TTBK1Q5TCY1 1321 aaPredicted RBP23.28■■□□□ 1.32
RPAIN-209ENST00000571558 IQGAP2Q13576 1575 aa23.28■■□□□ 1.32
RPAIN-209ENST00000571558 ADGRL1O94910 1474 aa23.27■■□□□ 1.32
RPAIN-209ENST00000571558 PPRC1Q5VV67 1664 aaKnown RBP23.27■■□□□ 1.32
RPAIN-209ENST00000571558 TEX14Q8IWB6 1497 aa23.25■■□□□ 1.31
RPAIN-209ENST00000571558 KDM5BQ9UGL1 1544 aa23.23■■□□□ 1.31
RPAIN-209ENST00000571558 EPRSP07814 1512 aaKnown RBP23.23■■□□□ 1.31
RPAIN-209ENST00000571558 COL17A1Q9UMD9 1497 aaPredicted RBP23.2■■□□□ 1.3
RPAIN-209ENST00000571558 DISP1Q96F81 1524 aa23.2■■□□□ 1.3
RPAIN-209ENST00000571558 MAP3K4Q9Y6R4 1608 aa23.19■■□□□ 1.3
RPAIN-209ENST00000571558 UGGT2Q9NYU1 1516 aa23.14■■□□□ 1.3
RPAIN-209ENST00000571558 ZCCHC11Q5TAX3 1644 aaKnown RBP23.09■■□□□ 1.29
RPAIN-209ENST00000571558 RAPGEF2Q9Y4G8 1499 aa23.09■■□□□ 1.29
RPAIN-209ENST00000571558 HECW2Q9P2P5 1572 aa23.08■■□□□ 1.29
RPAIN-209ENST00000571558 WDR7Q9Y4E6 1490 aa23.07■■□□□ 1.28
RPAIN-209ENST00000571558 KIAA0556O60303 1618 aa23.05■■□□□ 1.28
RPAIN-209ENST00000571558 MAGI3Q5TCQ9 1506 aa23.03■■□□□ 1.28
RPAIN-209ENST00000571558 CD109Q6YHK3 1445 aa23■■□□□ 1.27
RPAIN-209ENST00000571558 GOLGA3Q08378 1498 aa22.96■■□□□ 1.27
RPAIN-209ENST00000571558 CFAP43Q8NDM7 1665 aa22.96■■□□□ 1.27
RPAIN-209ENST00000571558 KCNH8Q96L42 1107 aa22.91■■□□□ 1.26
RPAIN-209ENST00000571558 ABCA8O94911 1581 aa22.89■■□□□ 1.25
RPAIN-209ENST00000571558 FAM9AQ8IZU1 332 aaPredicted RBP22.87■■□□□ 1.25
RPAIN-209ENST00000571558 ARAP3Q8WWN8 1544 aa22.87■■□□□ 1.25
RPAIN-209ENST00000571558 PHLDB1Q86UU1 1377 aa22.86■■□□□ 1.25
RPAIN-209ENST00000571558 FBXO41Q8TF61 875 aa22.84■■□□□ 1.25
RPAIN-209ENST00000571558 CTTNBP2Q8WZ74 1663 aa22.84■■□□□ 1.25
RPAIN-209ENST00000571558 KIF21BO75037 1637 aa22.77■■□□□ 1.24
RPAIN-209ENST00000571558 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
RPAIN-209ENST00000571558 PTPRMP28827 1452 aa22.72■■□□□ 1.23
RPAIN-209ENST00000571558 ATP10BO94823 1461 aa22.72■■□□□ 1.23
RPAIN-209ENST00000571558 ADAMTSL3P82987 1691 aa22.7■■□□□ 1.22
RPAIN-209ENST00000571558 NEO1Q92859 1461 aa22.7■■□□□ 1.22
RPAIN-209ENST00000571558 ABCA9Q8IUA7 1624 aa22.7■■□□□ 1.22
RPAIN-209ENST00000571558 EEA1Q15075 1411 aa22.66■■□□□ 1.22
RPAIN-209ENST00000571558 RAPGEF3O95398 923 aa22.64■■□□□ 1.21
RPAIN-209ENST00000571558 ARID3CA6NKF2 412 aa22.6■■□□□ 1.21
RPAIN-209ENST00000571558 PCF11O94913 1555 aaKnown RBP22.59■■□□□ 1.21
RPAIN-209ENST00000571558 BCORL1Q5H9F3 1711 aa22.58■■□□□ 1.21
RPAIN-209ENST00000571558 ARID4BQ4LE39 1312 aaPredicted RBP22.58■■□□□ 1.21
RPAIN-209ENST00000571558 P3H3Q8IVL6 736 aa22.57■■□□□ 1.2
RPAIN-209ENST00000571558 LMTK3Q96Q04 1460 aa22.55■■□□□ 1.2
RPAIN-209ENST00000571558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.54■■□□□ 1.2
RPAIN-209ENST00000571558 HNRNPUL2Q1KMD3 747 aaKnown RBP22.54■■□□□ 1.2
RPAIN-209ENST00000571558 CSRNP3Q8WYN3 585 aa22.54■■□□□ 1.2
RPAIN-209ENST00000571558 SAMD9Q5K651 1589 aa22.53■■□□□ 1.2
RPAIN-209ENST00000571558 RAPGEF6Q8TEU7 1601 aa22.53■■□□□ 1.2
RPAIN-209ENST00000571558 MADDQ8WXG6 1647 aa22.53■■□□□ 1.2
RPAIN-209ENST00000571558 FRMPD1Q5SYB0 1578 aa22.52■■□□□ 1.2
RPAIN-209ENST00000571558 DENND4BO75064 1496 aaPredicted RBP22.5■■□□□ 1.19
RPAIN-209ENST00000571558 POGZQ7Z3K3 1410 aa22.49■■□□□ 1.19
RPAIN-209ENST00000571558 FHOD3Q2V2M9 1422 aa22.48■■□□□ 1.19
RPAIN-209ENST00000571558 ARHGEF40Q8TER5 1519 aa22.48■■□□□ 1.19
RPAIN-209ENST00000571558 PLEKHD1A6NEE1 506 aa22.48■■□□□ 1.19
RPAIN-209ENST00000571558 NUP153P49790 1475 aaKnown RBP22.47■■□□□ 1.19
RPAIN-209ENST00000571558 AKNAQ7Z591 1439 aa22.45■■□□□ 1.18
RPAIN-209ENST00000571558 FANCAO15360 1455 aa22.44■■□□□ 1.18
RPAIN-209ENST00000571558 CFAP74Q9C0B2 1584 aa22.42■■□□□ 1.18
RPAIN-209ENST00000571558 MAGI2Q86UL8 1455 aa22.42■■□□□ 1.18
RPAIN-209ENST00000571558 RICTORQ6R327 1708 aa22.41■■□□□ 1.18
RPAIN-209ENST00000571558 RIMS1Q86UR5 1692 aaKnown RBP22.41■■□□□ 1.18
RPAIN-209ENST00000571558 ZMYM4Q5VZL5 1548 aa22.4■■□□□ 1.18
RPAIN-209ENST00000571558 EFCAB5A4FU69 1503 aa22.37■■□□□ 1.17
RPAIN-209ENST00000571558 HSPA2P54652 639 aa22.37■■□□□ 1.17
RPAIN-209ENST00000571558 CERKQ8TCT0 537 aa22.36■■□□□ 1.17
RPAIN-209ENST00000571558 ZFYVE16Q7Z3T8 1539 aa22.34■■□□□ 1.17
RPAIN-209ENST00000571558 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.34■■□□□ 1.17
RPAIN-209ENST00000571558 YEATS2Q9ULM3 1422 aa22.3■■□□□ 1.16
RPAIN-209ENST00000571558 TTC37Q6PGP7 1564 aa22.28■■□□□ 1.16
RPAIN-209ENST00000571558 LOC105371045A0A1W2PR82 267 aa22.28■■□□□ 1.16
RPAIN-209ENST00000571558 PLCH2O75038 1416 aa22.26■■□□□ 1.15
RPAIN-209ENST00000571558 DMRT2Q9Y5R5 561 aa22.26■■□□□ 1.15
RPAIN-209ENST00000571558 SCAPERQ9BY12 1400 aa22.26■■□□□ 1.15
RPAIN-209ENST00000571558 HECW1Q76N89 1606 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms