RNA–Protein interactions for RNA: ENST00000568339.5

COX4I1-215, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 2

Gene COX4I1, Length 2,271 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-215ENST00000568339 ADAMTS12P58397 1594 aa25.7■■□□□ 1.7
COX4I1-215ENST00000568339 GRIN2BQ13224 1484 aa25.7■■□□□ 1.7
COX4I1-215ENST00000568339 FHAD1B1AJZ9 1412 aa25.69■■□□□ 1.7
COX4I1-215ENST00000568339 AQRO60306 1485 aaKnown RBP eCLIP25.69■■□□□ 1.76e-9■■■■■ 43.9
COX4I1-215ENST00000568339 MAP3K1Q13233 1512 aa25.64■■□□□ 1.7
COX4I1-215ENST00000568339 ZNF608Q9ULD9 1512 aaPredicted RBP25.64■■□□□ 1.69
COX4I1-215ENST00000568339 TTBK1Q5TCY1 1321 aaPredicted RBP25.61■■□□□ 1.69
COX4I1-215ENST00000568339 EIF4G3O43432 1585 aaKnown RBP25.6■■□□□ 1.69
COX4I1-215ENST00000568339 SAMD9Q5K651 1589 aa25.6■■□□□ 1.69
COX4I1-215ENST00000568339 ZEB1P37275 1124 aaPredicted RBP25.54■■□□□ 1.68
COX4I1-215ENST00000568339 TIAM1Q13009 1591 aa25.53■■□□□ 1.68
COX4I1-215ENST00000568339 PCF11O94913 1555 aaKnown RBP25.51■■□□□ 1.67
COX4I1-215ENST00000568339 FHOD3Q2V2M9 1422 aa25.5■■□□□ 1.67
COX4I1-215ENST00000568339 SCAF1Q9H7N4 1312 aaKnown RBP25.5■■□□□ 1.67
COX4I1-215ENST00000568339 CFAP43Q8NDM7 1665 aa25.49■■□□□ 1.67
COX4I1-215ENST00000568339 FYCO1Q9BQS8 1478 aa25.49■■□□□ 1.67
COX4I1-215ENST00000568339 KANK4Q5T7N3 995 aaPredicted RBP25.48■■□□□ 1.67
COX4I1-215ENST00000568339 SNAPC4Q5SXM2 1469 aa25.47■■□□□ 1.67
COX4I1-215ENST00000568339 IQGAP2Q13576 1575 aa25.47■■□□□ 1.67
COX4I1-215ENST00000568339 FMN1Q68DA7 1419 aa25.47■■□□□ 1.67
COX4I1-215ENST00000568339 CASKIN1Q8WXD9 1431 aa25.47■■□□□ 1.67
COX4I1-215ENST00000568339 MAGI1Q96QZ7 1491 aaPredicted RBP25.47■■□□□ 1.67
COX4I1-215ENST00000568339 GRIN2AQ12879 1464 aa25.4■■□□□ 1.66
COX4I1-215ENST00000568339 P3H3Q8IVL6 736 aa25.4■■□□□ 1.66
COX4I1-215ENST00000568339 LRRC9Q6ZRR7 1453 aa25.39■■□□□ 1.66
COX4I1-215ENST00000568339 RRBP1Q9P2E9 1410 aaKnown RBP25.39■■□□□ 1.65
COX4I1-215ENST00000568339 UGGT2Q9NYU1 1516 aa25.38■■□□□ 1.65
COX4I1-215ENST00000568339 KIAA0586Q9BVV6 1533 aa25.36■■□□□ 1.65
COX4I1-215ENST00000568339 SYNJ2O15056 1496 aa25.36■■□□□ 1.65
COX4I1-215ENST00000568339 LRRIQ1Q96JM4 1722 aa25.26■■□□□ 1.63
COX4I1-215ENST00000568339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.25■■□□□ 1.63
COX4I1-215ENST00000568339 CEP170Q5SW79 1584 aa25.24■■□□□ 1.63
COX4I1-215ENST00000568339 CCNB3Q8WWL7 1395 aa25.23■■□□□ 1.63
COX4I1-215ENST00000568339 NUP160Q12769 1436 aa25.22■■□□□ 1.63
COX4I1-215ENST00000568339 KIAA0556O60303 1618 aa25.22■■□□□ 1.63
COX4I1-215ENST00000568339 CCER1Q8TC90 406 aaPredicted RBP25.21■■□□□ 1.63
COX4I1-215ENST00000568339 DISP1Q96F81 1524 aa25.2■■□□□ 1.62
COX4I1-215ENST00000568339 HNRNPUL2Q1KMD3 747 aaKnown RBP25.19■■□□□ 1.62
COX4I1-215ENST00000568339 HECW1Q76N89 1606 aa25.19■■□□□ 1.62
COX4I1-215ENST00000568339 CHMP7Q8WUX9 453 aaPredicted RBP25.19■■□□□ 1.62
COX4I1-215ENST00000568339 CCDC18Q5T9S5 1454 aa25.17■■□□□ 1.62
COX4I1-215ENST00000568339 PHLDB1Q86UU1 1377 aa25.15■■□□□ 1.62
COX4I1-215ENST00000568339 ATP1B4Q9UN42 357 aaPredicted RBP25.14■■□□□ 1.62
COX4I1-215ENST00000568339 EHBP1L1Q8N3D4 1523 aa25.11■■□□□ 1.61
COX4I1-215ENST00000568339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.07■■□□□ 1.6
COX4I1-215ENST00000568339 EPRSP07814 1512 aaKnown RBP25.06■■□□□ 1.6
COX4I1-215ENST00000568339 MTUS2Q5JR59 1369 aa25.05■■□□□ 1.6
COX4I1-215ENST00000568339 SUPT6HQ7KZ85 1726 aaKnown RBP25.05■■□□□ 1.6
COX4I1-215ENST00000568339 ARHGEF11O15085 1522 aa25.02■■□□□ 1.6
COX4I1-215ENST00000568339 FBLN2P98095 1184 aa25.01■■□□□ 1.59
COX4I1-215ENST00000568339 RAPGEF6Q8TEU7 1601 aa25.01■■□□□ 1.59
COX4I1-215ENST00000568339 MAGI3Q5TCQ9 1506 aa25.01■■□□□ 1.59
COX4I1-215ENST00000568339 CARMIL2Q6F5E8 1435 aa24.99■■□□□ 1.59
COX4I1-215ENST00000568339 CHD1O14646 1710 aa24.99■■□□□ 1.59
COX4I1-215ENST00000568339 NCOA2Q15596 1464 aa24.99■■□□□ 1.59
COX4I1-215ENST00000568339 JPH4Q96JJ6 628 aa24.97■■□□□ 1.59
COX4I1-215ENST00000568339 FGD6Q6ZV73 1430 aa24.97■■□□□ 1.59
COX4I1-215ENST00000568339 NUP153P49790 1475 aaKnown RBP24.94■■□□□ 1.58
COX4I1-215ENST00000568339 ACIN1Q9UKV3 1341 aaKnown RBP24.94■■□□□ 1.58
COX4I1-215ENST00000568339 CDK13Q14004 1512 aaKnown RBP24.94■■□□□ 1.58
COX4I1-215ENST00000568339 MYOM3Q5VTT5 1437 aa24.93■■□□□ 1.58
COX4I1-215ENST00000568339 CLSPNQ9HAW4 1339 aa24.89■■□□□ 1.58
COX4I1-215ENST00000568339 SHROOM2Q13796 1616 aa24.87■■□□□ 1.57
COX4I1-215ENST00000568339 DHX57Q6P158 1386 aaKnown RBP24.86■■□□□ 1.57
COX4I1-215ENST00000568339 FAM50AQ14320 339 aaKnown RBP24.85■■□□□ 1.57
COX4I1-215ENST00000568339 NEUROD1Q13562 356 aa24.84■■□□□ 1.57
COX4I1-215ENST00000568339 ABCA8O94911 1581 aa24.84■■□□□ 1.57
COX4I1-215ENST00000568339 TCOF1Q13428 1488 aaKnown RBP24.82■■□□□ 1.56
COX4I1-215ENST00000568339 PLB1Q6P1J6 1458 aa24.82■■□□□ 1.56
COX4I1-215ENST00000568339 PTPN23Q9H3S7 1636 aa24.82■■□□□ 1.56
COX4I1-215ENST00000568339 SETD5Q9C0A6 1442 aa24.82■■□□□ 1.56
COX4I1-215ENST00000568339 MYT1Q01538 1121 aa24.81■■□□□ 1.56
COX4I1-215ENST00000568339 ITGAEP38570 1179 aa24.8■■□□□ 1.56
COX4I1-215ENST00000568339 MIA2Q96PC5 1412 aa24.8■■□□□ 1.56
COX4I1-215ENST00000568339 RAB3GAP2Q9H2M9 1393 aa24.79■■□□□ 1.56
COX4I1-215ENST00000568339 PRG4Q92954 1404 aaPredicted RBP24.79■■□□□ 1.56
COX4I1-215ENST00000568339 CDK11AQ9UQ88 783 aaPredicted RBP24.76■■□□□ 1.55
COX4I1-215ENST00000568339 ADCY10Q96PN6 1610 aa24.76■■□□□ 1.55
COX4I1-215ENST00000568339 TROQ12816 1431 aaPredicted RBP24.73■■□□□ 1.55
COX4I1-215ENST00000568339 CLASP1Q7Z460 1538 aa24.72■■□□□ 1.55
COX4I1-215ENST00000568339 PTPRKQ15262 1439 aa24.69■■□□□ 1.54
COX4I1-215ENST00000568339 PTPRGP23470 1445 aa24.68■■□□□ 1.54
COX4I1-215ENST00000568339 HFM1A2PYH4 1435 aa24.67■■□□□ 1.54
COX4I1-215ENST00000568339 ARID3CA6NKF2 412 aa24.66■■□□□ 1.54
COX4I1-215ENST00000568339 GTF3C3Q9Y5Q9 886 aa24.66■■□□□ 1.54
COX4I1-215ENST00000568339 ATP10BO94823 1461 aa24.65■■□□□ 1.54
COX4I1-215ENST00000568339 ITSN2Q9NZM3 1697 aa24.64■■□□□ 1.54
COX4I1-215ENST00000568339 AKNAQ7Z591 1439 aa24.62■■□□□ 1.53
COX4I1-215ENST00000568339 MAPKBP1O60336 1514 aa24.61■■□□□ 1.53
COX4I1-215ENST00000568339 KIF14Q15058 1648 aa24.6■■□□□ 1.53
COX4I1-215ENST00000568339 GCC2Q8IWJ2 1684 aa24.59■■□□□ 1.53
COX4I1-215ENST00000568339 NAIPQ13075 1403 aa24.58■■□□□ 1.53
COX4I1-215ENST00000568339 UACAQ9BZF9 1416 aa24.58■■□□□ 1.52
COX4I1-215ENST00000568339 ERCC6L2Q5T890 1561 aa24.57■■□□□ 1.52
COX4I1-215ENST00000568339 CENPBP07199 599 aaPredicted RBP24.56■■□□□ 1.52
COX4I1-215ENST00000568339 DNMT1P26358 1616 aaKnown RBP24.56■■□□□ 1.52
COX4I1-215ENST00000568339 DIEXFQ68CQ4 756 aaKnown RBP24.55■■□□□ 1.52
COX4I1-215ENST00000568339 GPATCH8Q9UKJ3 1502 aaKnown RBP24.55■■□□□ 1.52
COX4I1-215ENST00000568339 ABCC10Q5T3U5 1492 aa24.53■■□□□ 1.52
COX4I1-215ENST00000568339 PLEKHD1A6NEE1 506 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms