RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 NPM3O75607 178 aaKnown RBP14.84□□□□□ -0.03
KLHDC4-220ENST00000568338 KCNA4P22459 653 aa14.84□□□□□ -0.03
KLHDC4-220ENST00000568338 PBRM1Q86U86 1689 aa14.82□□□□□ -0.04
KLHDC4-220ENST00000568338 CUX1P39880 1505 aa14.8□□□□□ -0.04
KLHDC4-220ENST00000568338 ERCC6L2Q5T890 1561 aa14.8□□□□□ -0.04
KLHDC4-220ENST00000568338 ILDR1Q86SU0 546 aaPredicted RBP14.79□□□□□ -0.04
KLHDC4-220ENST00000568338 CEP170Q5SW79 1584 aa14.75□□□□□ -0.05
KLHDC4-220ENST00000568338 GRIN2AQ12879 1464 aa14.74□□□□□ -0.05
KLHDC4-220ENST00000568338 DCAF8L1A6NGE4 600 aa14.73□□□□□ -0.05
KLHDC4-220ENST00000568338 ABCA5Q8WWZ7 1642 aa14.73□□□□□ -0.05
KLHDC4-220ENST00000568338 KIF13AQ9H1H9 1805 aa14.72□□□□□ -0.05
KLHDC4-220ENST00000568338 ABCA10Q8WWZ4 1543 aa14.71□□□□□ -0.06
KLHDC4-220ENST00000568338 NUP160Q12769 1436 aa14.69□□□□□ -0.06
KLHDC4-220ENST00000568338 SHROOM2Q13796 1616 aa14.67□□□□□ -0.06
KLHDC4-220ENST00000568338 FAM69CQ0P6D2 419 aa14.67□□□□□ -0.06
KLHDC4-220ENST00000568338 ADAMTS12P58397 1594 aa14.67□□□□□ -0.06
KLHDC4-220ENST00000568338 KDM4FA0A1W2PPD8 638 aa14.66□□□□□ -0.06
KLHDC4-220ENST00000568338 ABCC10Q5T3U5 1492 aa14.65□□□□□ -0.06
KLHDC4-220ENST00000568338 KDM6BO15054 1643 aa14.64□□□□□ -0.07
KLHDC4-220ENST00000568338 NPM1P06748 294 aaKnown RBP eCLIP14.64□□□□□ -0.07
KLHDC4-220ENST00000568338 PRG4Q92954 1404 aaPredicted RBP14.62□□□□□ -0.07
KLHDC4-220ENST00000568338 FHAD1B1AJZ9 1412 aa14.61□□□□□ -0.07
KLHDC4-220ENST00000568338 MAPKBP1O60336 1514 aa14.6□□□□□ -0.07
KLHDC4-220ENST00000568338 DIP2BQ9P265 1576 aa14.6□□□□□ -0.07
KLHDC4-220ENST00000568338 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.08
KLHDC4-220ENST00000568338 JPH4Q96JJ6 628 aa14.54□□□□□ -0.08
KLHDC4-220ENST00000568338 ERICH3Q5RHP9 1530 aa14.52□□□□□ -0.08
KLHDC4-220ENST00000568338 ADCY10Q96PN6 1610 aa14.5□□□□□ -0.09
KLHDC4-220ENST00000568338 RUSC2Q8N2Y8 1516 aa14.48□□□□□ -0.09
KLHDC4-220ENST00000568338 ADGRL1O94910 1474 aa14.48□□□□□ -0.09
KLHDC4-220ENST00000568338 TSPOAP1O95153 1857 aa14.45□□□□□ -0.1
KLHDC4-220ENST00000568338 HECW2Q9P2P5 1572 aa14.44□□□□□ -0.1
KLHDC4-220ENST00000568338 TOP2BQ02880 1626 aa14.43□□□□□ -0.1
KLHDC4-220ENST00000568338 BIVM-ERCC5R4GMW8 1640 aa14.43□□□□□ -0.1
KLHDC4-220ENST00000568338 RNF39Q9H2S5 420 aa14.34□□□□□ -0.11
KLHDC4-220ENST00000568338 KIAA0586Q9BVV6 1533 aa14.34□□□□□ -0.11
KLHDC4-220ENST00000568338 PTPRGP23470 1445 aa14.32□□□□□ -0.12
KLHDC4-220ENST00000568338 PLB1Q6P1J6 1458 aa14.32□□□□□ -0.12
KLHDC4-220ENST00000568338 GLI2P10070 1586 aa14.32□□□□□ -0.12
KLHDC4-220ENST00000568338 ASXL2Q76L83 1435 aa14.32□□□□□ -0.12
KLHDC4-220ENST00000568338 ABCC2Q92887 1545 aa14.31□□□□□ -0.12
KLHDC4-220ENST00000568338 FBXO41Q8TF61 875 aa14.31□□□□□ -0.12
KLHDC4-220ENST00000568338 TTBK1Q5TCY1 1321 aaPredicted RBP14.31□□□□□ -0.12
KLHDC4-220ENST00000568338 PPRC1Q5VV67 1664 aaKnown RBP14.3□□□□□ -0.12
KLHDC4-220ENST00000568338 TEX14Q8IWB6 1497 aa14.28□□□□□ -0.12
KLHDC4-220ENST00000568338 CARMIL2Q6F5E8 1435 aa14.26□□□□□ -0.13
KLHDC4-220ENST00000568338 COL17A1Q9UMD9 1497 aaPredicted RBP14.25□□□□□ -0.13
KLHDC4-220ENST00000568338 TNIKQ9UKE5 1360 aa14.25□□□□□ -0.13
KLHDC4-220ENST00000568338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.132e-6■■■□□ 18.5
KLHDC4-220ENST00000568338 CUL7Q14999 1698 aa14.23□□□□□ -0.13
KLHDC4-220ENST00000568338 MAP3K4Q9Y6R4 1608 aa14.23□□□□□ -0.13
KLHDC4-220ENST00000568338 UHRF1BP1LA0JNW5 1464 aa14.22□□□□□ -0.13
KLHDC4-220ENST00000568338 EPRSP07814 1512 aaKnown RBP14.21□□□□□ -0.13
KLHDC4-220ENST00000568338 UACAQ9BZF9 1416 aa14.19□□□□□ -0.14
KLHDC4-220ENST00000568338 IGF1RP08069 1367 aa14.18□□□□□ -0.14
KLHDC4-220ENST00000568338 KIF27Q86VH2 1401 aa14.16□□□□□ -0.14
KLHDC4-220ENST00000568338 KDM5BQ9UGL1 1544 aa14.15□□□□□ -0.14
KLHDC4-220ENST00000568338 CACNB1Q02641 598 aaPredicted RBP14.15□□□□□ -0.14
KLHDC4-220ENST00000568338 EEA1Q15075 1411 aa14.15□□□□□ -0.14
KLHDC4-220ENST00000568338 IQGAP2Q13576 1575 aa14.14□□□□□ -0.15
KLHDC4-220ENST00000568338 ZCCHC11Q5TAX3 1644 aaKnown RBP14.12□□□□□ -0.15
KLHDC4-220ENST00000568338 C1QBPQ07021 282 aaKnown RBP14.12□□□□□ -0.15
KLHDC4-220ENST00000568338 LMTK3Q96Q04 1460 aa14.11□□□□□ -0.15
KLHDC4-220ENST00000568338 SLC4A2P04920 1241 aa14.1□□□□□ -0.15
KLHDC4-220ENST00000568338 WDR7Q9Y4E6 1490 aa14.1□□□□□ -0.15
KLHDC4-220ENST00000568338 CARMIL1Q5VZK9 1371 aa14.09□□□□□ -0.15
KLHDC4-220ENST00000568338 KIF21BO75037 1637 aa14.09□□□□□ -0.15
KLHDC4-220ENST00000568338 DISP1Q96F81 1524 aa14.08□□□□□ -0.16
KLHDC4-220ENST00000568338 CD109Q6YHK3 1445 aa14.07□□□□□ -0.16
KLHDC4-220ENST00000568338 MAGI3Q5TCQ9 1506 aa14.07□□□□□ -0.16
KLHDC4-220ENST00000568338 FAM9AQ8IZU1 332 aaPredicted RBP14.06□□□□□ -0.16
KLHDC4-220ENST00000568338 SLC4A1APQ9BWU0 796 aaKnown RBP14.04□□□□□ -0.16
KLHDC4-220ENST00000568338 PTPRMP28827 1452 aa14.04□□□□□ -0.16
KLHDC4-220ENST00000568338 CFAP43Q8NDM7 1665 aa14.04□□□□□ -0.16
KLHDC4-220ENST00000568338 U3KPZ7 1027 aaPredicted RBP14.03□□□□□ -0.16
KLHDC4-220ENST00000568338 KIAA0556O60303 1618 aa14.01□□□□□ -0.17
KLHDC4-220ENST00000568338 UGGT2Q9NYU1 1516 aa14.01□□□□□ -0.17
KLHDC4-220ENST00000568338 PCF11O94913 1555 aaKnown RBP14□□□□□ -0.17
KLHDC4-220ENST00000568338 CSRNP3Q8WYN3 585 aa14□□□□□ -0.17
KLHDC4-220ENST00000568338 KCNH8Q96L42 1107 aa14□□□□□ -0.17
KLHDC4-220ENST00000568338 ADAMTSL3P82987 1691 aa13.98□□□□□ -0.17
KLHDC4-220ENST00000568338 ARAP3Q8WWN8 1544 aa13.97□□□□□ -0.17
KLHDC4-220ENST00000568338 SOCS7O14512 581 aa13.94□□□□□ -0.18
KLHDC4-220ENST00000568338 DISP3Q9P2K9 1392 aa13.94□□□□□ -0.18
KLHDC4-220ENST00000568338 ARID4BQ4LE39 1312 aaPredicted RBP13.93□□□□□ -0.18
KLHDC4-220ENST00000568338 GOLGA3Q08378 1498 aa13.93□□□□□ -0.18
KLHDC4-220ENST00000568338 PRXQ9BXM0 1461 aa13.93□□□□□ -0.18
KLHDC4-220ENST00000568338 RAPGEF2Q9Y4G8 1499 aa13.93□□□□□ -0.18
KLHDC4-220ENST00000568338 ILDR2Q71H61 639 aa13.92□□□□□ -0.18
KLHDC4-220ENST00000568338 MADDQ8WXG6 1647 aa13.91□□□□□ -0.18
KLHDC4-220ENST00000568338 CERKQ8TCT0 537 aa13.91□□□□□ -0.18
KLHDC4-220ENST00000568338 BCORL1Q5H9F3 1711 aa13.9□□□□□ -0.18
KLHDC4-220ENST00000568338 PHLDB1Q86UU1 1377 aa13.9□□□□□ -0.18
KLHDC4-220ENST00000568338 ABCA8O94911 1581 aa13.9□□□□□ -0.18
KLHDC4-220ENST00000568338 RAPGEF3O95398 923 aa13.87□□□□□ -0.19
KLHDC4-220ENST00000568338 HSPA2P54652 639 aa13.87□□□□□ -0.19
KLHDC4-220ENST00000568338 LOC105371045A0A1W2PR82 267 aa13.86□□□□□ -0.19
KLHDC4-220ENST00000568338 RIMS1Q86UR5 1692 aaKnown RBP13.85□□□□□ -0.19
KLHDC4-220ENST00000568338 NEO1Q92859 1461 aa13.84□□□□□ -0.19
KLHDC4-220ENST00000568338 ABCA9Q8IUA7 1624 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms