RNA–Protein interactions for RNA: ENST00000567285.1

CNOT1-212, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-212ENST00000567285 IFNLR1Q8IU57 520 aaPredicted RBP13.51□□□□□ -0.25
CNOT1-212ENST00000567285 PLEKHG5O94827 1062 aa13.45□□□□□ -0.26
CNOT1-212ENST00000567285 NESP48681 1621 aa13.42□□□□□ -0.26
CNOT1-212ENST00000567285 KLHL34Q8N239 644 aa13.41□□□□□ -0.26
CNOT1-212ENST00000567285 NPM1P06748 294 aaKnown RBP eCLIP13.35□□□□□ -0.27
CNOT1-212ENST00000567285 ZBTB47Q9UFB7 747 aaPredicted RBP13.35□□□□□ -0.27
CNOT1-212ENST00000567285 NUBP1P53384 320 aa13.33□□□□□ -0.28
CNOT1-212ENST00000567285 HAX1O00165 279 aa13.32□□□□□ -0.28
CNOT1-212ENST00000567285 EVX2Q03828 476 aa13.32□□□□□ -0.28
CNOT1-212ENST00000567285 RASEFQ8IZ41 740 aa13.32□□□□□ -0.28
CNOT1-212ENST00000567285 C19orf67A6NJJ6 358 aa13.31□□□□□ -0.28
CNOT1-212ENST00000567285 THOC2Q8NI27 1593 aaKnown RBP13.31□□□□□ -0.28
CNOT1-212ENST00000567285 SMARCA2P51531 1590 aa13.3□□□□□ -0.28
CNOT1-212ENST00000567285 NCAPD3P42695 1498 aa13.29□□□□□ -0.28
CNOT1-212ENST00000567285 SPOCK2Q92563 424 aa13.29□□□□□ -0.28
CNOT1-212ENST00000567285 ILDR1Q86SU0 546 aaPredicted RBP13.28□□□□□ -0.28
CNOT1-212ENST00000567285 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
CNOT1-212ENST00000567285 CYB5RLQ6IPT4 315 aa13.27□□□□□ -0.29
CNOT1-212ENST00000567285 DCAF1Q9Y4B6 1507 aa13.26□□□□□ -0.29
CNOT1-212ENST00000567285 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
CNOT1-212ENST00000567285 TSPYL2Q9H2G4 693 aaPredicted RBP13.23□□□□□ -0.29
CNOT1-212ENST00000567285 ZCCHC6Q5VYS8 1495 aaKnown RBP13.19□□□□□ -0.3
CNOT1-212ENST00000567285 ZRANB1Q9UGI0 708 aa13.19□□□□□ -0.3
CNOT1-212ENST00000567285 PDS5BQ9NTI5 1447 aa13.19□□□□□ -0.3
CNOT1-212ENST00000567285 RIMBP3CA6NJZ7 1639 aa13.17□□□□□ -0.3
CNOT1-212ENST00000567285 RIMBP3BA6NNM3 1639 aa13.17□□□□□ -0.3
CNOT1-212ENST00000567285 RIMBP3Q9UFD9 1639 aa13.17□□□□□ -0.3
CNOT1-212ENST00000567285 DCAF8Q5TAQ9 597 aa13.16□□□□□ -0.3
CNOT1-212ENST00000567285 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
CNOT1-212ENST00000567285 ATAD2BQ9ULI0 1458 aa13.13□□□□□ -0.31
CNOT1-212ENST00000567285 CCDC61Q9Y6R9 512 aa13.13□□□□□ -0.31
CNOT1-212ENST00000567285 PAK3O75914 559 aaPredicted RBP13.12□□□□□ -0.31
CNOT1-212ENST00000567285 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
CNOT1-212ENST00000567285 PHF12Q96QT6 1004 aa13.11□□□□□ -0.31
CNOT1-212ENST00000567285 LAMC3Q9Y6N6 1575 aa13.11□□□□□ -0.31
CNOT1-212ENST00000567285 KIF21AQ7Z4S6 1674 aa13.1□□□□□ -0.31
CNOT1-212ENST00000567285 ZNF579Q8NAF0 562 aaKnown RBP13.08□□□□□ -0.32
CNOT1-212ENST00000567285 ARHGEF11O15085 1522 aa13.07□□□□□ -0.32
CNOT1-212ENST00000567285 MRC2Q9UBG0 1479 aa13.06□□□□□ -0.32
CNOT1-212ENST00000567285 GSE1Q14687 1217 aa13.06□□□□□ -0.32
CNOT1-212ENST00000567285 PYGBP11216 843 aa13.04□□□□□ -0.32
CNOT1-212ENST00000567285 PKD2Q13563 968 aa13.04□□□□□ -0.32
CNOT1-212ENST00000567285 HMGXB3Q12766 1538 aa13.03□□□□□ -0.32
CNOT1-212ENST00000567285 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
CNOT1-212ENST00000567285 KIF12Q96FN5 646 aa13.01□□□□□ -0.33
CNOT1-212ENST00000567285 BAZ1BQ9UIG0 1483 aaKnown RBP13□□□□□ -0.33
CNOT1-212ENST00000567285 MAP3K13O43283 966 aa12.98□□□□□ -0.33
CNOT1-212ENST00000567285 WDR62O43379 1518 aa12.98□□□□□ -0.33
CNOT1-212ENST00000567285 GABBR2O75899 941 aa12.97□□□□□ -0.33
CNOT1-212ENST00000567285 RTN4Q9NQC3 1192 aaKnown RBP12.97□□□□□ -0.33
CNOT1-212ENST00000567285 GALR2O43603 387 aaPredicted RBP12.94□□□□□ -0.34
CNOT1-212ENST00000567285 MS4A3Q96HJ5 214 aa12.94□□□□□ -0.34
CNOT1-212ENST00000567285 CHRM1P11229 460 aaPredicted RBP12.93□□□□□ -0.34
CNOT1-212ENST00000567285 CADPSQ9ULU8 1353 aa12.92□□□□□ -0.34
CNOT1-212ENST00000567285 ECM2O94769 699 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-212ENST00000567285 PCDHB13Q9Y5F0 798 aa12.9□□□□□ -0.34
CNOT1-212ENST00000567285 IFNL1Q8IU54 200 aa12.89□□□□□ -0.35
CNOT1-212ENST00000567285 RNF25Q96BH1 459 aaPredicted RBP12.89□□□□□ -0.35
CNOT1-212ENST00000567285 PCDHB8Q9UN66 801 aa12.89□□□□□ -0.35
CNOT1-212ENST00000567285 TRPC6Q9Y210 931 aa12.88□□□□□ -0.35
CNOT1-212ENST00000567285 AMER1Q5JTC6 1135 aaPredicted RBP12.87□□□□□ -0.35
CNOT1-212ENST00000567285 ARAP1Q96P48 1450 aa12.86□□□□□ -0.35
CNOT1-212ENST00000567285 RGL2O15211 777 aa12.85□□□□□ -0.35
CNOT1-212ENST00000567285 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
CNOT1-212ENST00000567285 SGIP1Q9BQI5 828 aa12.83□□□□□ -0.36
CNOT1-212ENST00000567285 SMARCA4P51532 1647 aa12.82□□□□□ -0.36
CNOT1-212ENST00000567285 CLCN6P51797 869 aa12.82□□□□□ -0.36
CNOT1-212ENST00000567285 ZNF467Q7Z7K2 595 aaPredicted RBP12.77□□□□□ -0.37
CNOT1-212ENST00000567285 RIOK3O14730 519 aaKnown RBP12.76□□□□□ -0.37
CNOT1-212ENST00000567285 POTEIP0CG38 1075 aa12.76□□□□□ -0.37
CNOT1-212ENST00000567285 FANCD2Q9BXW9 1451 aa12.76□□□□□ -0.37
CNOT1-212ENST00000567285 BMP2KQ9NSY1 1161 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-212ENST00000567285 RSF1Q96T23 1441 aaPredicted RBP12.71□□□□□ -0.38
CNOT1-212ENST00000567285 PSEN1P49768 467 aa12.7□□□□□ -0.38
CNOT1-212ENST00000567285 DCBLD2Q96PD2 775 aa12.7□□□□□ -0.38
CNOT1-212ENST00000567285 TTLL13PA6NNM8 815 aa12.69□□□□□ -0.38
CNOT1-212ENST00000567285 PDAP1Q13442 181 aaKnown RBP12.69□□□□□ -0.38
CNOT1-212ENST00000567285 TMEM106CQ9BVX2 250 aa12.69□□□□□ -0.38
CNOT1-212ENST00000567285 ZNF608Q9ULD9 1512 aaPredicted RBP12.68□□□□□ -0.38
CNOT1-212ENST00000567285 ATMINO43313 823 aaPredicted RBP12.68□□□□□ -0.38
CNOT1-212ENST00000567285 TIE1P35590 1138 aa12.68□□□□□ -0.38
CNOT1-212ENST00000567285 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.67□□□□□ -0.38
CNOT1-212ENST00000567285 ATN1P54259 1190 aaPredicted RBP12.67□□□□□ -0.38
CNOT1-212ENST00000567285 PELP1Q8IZL8 1130 aaKnown RBP12.67□□□□□ -0.38
CNOT1-212ENST00000567285 ZFP91Q96JP5 570 aaPredicted RBP12.67□□□□□ -0.38
CNOT1-212ENST00000567285 VGFO15240 615 aaPredicted RBP12.66□□□□□ -0.38
CNOT1-212ENST00000567285 ASTLQ6HA08 431 aaPredicted RBP12.66□□□□□ -0.38
CNOT1-212ENST00000567285 KDM4FA0A1W2PPD8 638 aa12.65□□□□□ -0.38
CNOT1-212ENST00000567285 URB2Q14146 1524 aaKnown RBP12.65□□□□□ -0.38
CNOT1-212ENST00000567285 PEG3Q9GZU2 1588 aa12.63□□□□□ -0.39
CNOT1-212ENST00000567285 IFT140Q96RY7 1462 aa12.61□□□□□ -0.39
CNOT1-212ENST00000567285 TRIM35Q9UPQ4 493 aa12.6□□□□□ -0.39
CNOT1-212ENST00000567285 FBXO41Q8TF61 875 aa12.58□□□□□ -0.4
CNOT1-212ENST00000567285 BCL11BQ9C0K0 894 aaPredicted RBP12.58□□□□□ -0.4
CNOT1-212ENST00000567285 STK25O00506 426 aa12.57□□□□□ -0.4
CNOT1-212ENST00000567285 CHD1O14646 1710 aa12.55□□□□□ -0.4
CNOT1-212ENST00000567285 CHGAP10645 457 aaKnown RBP12.55□□□□□ -0.4
CNOT1-212ENST00000567285 CABP2Q9NPB3 220 aa12.55□□□□□ -0.4
CNOT1-212ENST00000567285 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
CNOT1-212ENST00000567285 STK24Q9Y6E0 443 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms