RNA–Protein interactions for RNA: ENST00000566613.1

GDPD3-205, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 5

Gene GDPD3, Length 235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-205ENST00000566613 REM2Q8IYK8 340 aaPredicted RBP8.48□□□□□ -1.05
GDPD3-205ENST00000566613 KLHL34Q8N239 644 aa8.48□□□□□ -1.05
GDPD3-205ENST00000566613 NPM1P06748 294 aaKnown RBP eCLIP8.46□□□□□ -1.06
GDPD3-205ENST00000566613 PAXIP1Q6ZW49 1069 aaPredicted RBP8.46□□□□□ -1.06
GDPD3-205ENST00000566613 SPRYD3Q8NCJ5 442 aa8.43□□□□□ -1.06
GDPD3-205ENST00000566613 SPDYE2BA6NHP3 402 aa8.42□□□□□ -1.06
GDPD3-205ENST00000566613 SPDYE6P0CI01 402 aa8.42□□□□□ -1.06
GDPD3-205ENST00000566613 SPDYE2Q495Y8 402 aa8.42□□□□□ -1.06
GDPD3-205ENST00000566613 TPRNQ4KMQ1 711 aa8.42□□□□□ -1.06
GDPD3-205ENST00000566613 DIEXFQ68CQ4 756 aaKnown RBP8.4□□□□□ -1.06
GDPD3-205ENST00000566613 CFAP44Q96MT7 982 aa8.4□□□□□ -1.06
GDPD3-205ENST00000566613 RGL2O15211 777 aa8.39□□□□□ -1.07
GDPD3-205ENST00000566613 DNAJC5Q9H3Z4 198 aa8.39□□□□□ -1.07
GDPD3-205ENST00000566613 PITPNM1O00562 1244 aa8.38□□□□□ -1.07
GDPD3-205ENST00000566613 PLCD3Q8N3E9 789 aa8.38□□□□□ -1.07
GDPD3-205ENST00000566613 SSUH2Q9Y2M2 353 aa8.38□□□□□ -1.07
GDPD3-205ENST00000566613 SUPT5HO00267 1087 aaKnown RBP8.37□□□□□ -1.07
GDPD3-205ENST00000566613 TRIM41Q8WV44 630 aa8.37□□□□□ -1.07
GDPD3-205ENST00000566613 ZNF692Q9BU19 519 aaPredicted RBP8.37□□□□□ -1.07
GDPD3-205ENST00000566613 MYT1LQ9UL68 1186 aa8.37□□□□□ -1.07
GDPD3-205ENST00000566613 PIP4P2Q8N4L2 257 aa8.36□□□□□ -1.07
GDPD3-205ENST00000566613 ZBTB47Q9UFB7 747 aaPredicted RBP8.36□□□□□ -1.07
GDPD3-205ENST00000566613 TSHZ2Q9NRE2 1034 aa8.33□□□□□ -1.08
GDPD3-205ENST00000566613 ZCCHC6Q5VYS8 1495 aaKnown RBP8.32□□□□□ -1.08
GDPD3-205ENST00000566613 MIER1Q8N108 512 aa8.31□□□□□ -1.08
GDPD3-205ENST00000566613 PLEKHG5O94827 1062 aa8.3□□□□□ -1.08
GDPD3-205ENST00000566613 FXR2P51116 673 aaKnown RBP eCLIP8.3□□□□□ -1.08
GDPD3-205ENST00000566613 HS6ST3Q8IZP7 471 aa8.3□□□□□ -1.08
GDPD3-205ENST00000566613 CHGAP10645 457 aaKnown RBP8.29□□□□□ -1.08
GDPD3-205ENST00000566613 SPDYE1Q8NFV5 336 aaPredicted RBP8.29□□□□□ -1.08
GDPD3-205ENST00000566613 SHROOM4Q9ULL8 1493 aa8.29□□□□□ -1.08
GDPD3-205ENST00000566613 NBR1Q14596 966 aa8.27□□□□□ -1.09
GDPD3-205ENST00000566613 CLEC11AQ9Y240 323 aa8.27□□□□□ -1.09
GDPD3-205ENST00000566613 HAX1O00165 279 aa8.26□□□□□ -1.09
GDPD3-205ENST00000566613 PABPN1Q86U42 306 aaKnown RBP eCLIP8.26□□□□□ -1.09
GDPD3-205ENST00000566613 ERICH6BQ5W0A0 696 aa8.25□□□□□ -1.09
GDPD3-205ENST00000566613 SP7Q8TDD2 431 aaPredicted RBP8.25□□□□□ -1.09
GDPD3-205ENST00000566613 CIZ1Q9ULV3 898 aaPredicted RBP8.24□□□□□ -1.09
GDPD3-205ENST00000566613 SUPT16HQ9Y5B9 1047 aaKnown RBP8.24□□□□□ -1.09
GDPD3-205ENST00000566613 UBE2Q2Q8WVN8 375 aa8.23□□□□□ -1.09
GDPD3-205ENST00000566613 ZNF316A6NFI3 1004 aaPredicted RBP8.2□□□□□ -1.1
GDPD3-205ENST00000566613 GSE1Q14687 1217 aa8.2□□□□□ -1.1
GDPD3-205ENST00000566613 PRKAR2AP13861 404 aaKnown RBP8.19□□□□□ -1.1
GDPD3-205ENST00000566613 DAXXQ9UER7 740 aaPredicted RBP8.19□□□□□ -1.1
GDPD3-205ENST00000566613 LOC105371045A0A1W2PR82 267 aa8.17□□□□□ -1.1
GDPD3-205ENST00000566613 CCER1Q8TC90 406 aaPredicted RBP8.17□□□□□ -1.1
GDPD3-205ENST00000566613 PRR29P0C7W0 189 aa8.14□□□□□ -1.11
GDPD3-205ENST00000566613 RNF25Q96BH1 459 aaPredicted RBP8.14□□□□□ -1.11
GDPD3-205ENST00000566613 EIF5BO60841 1220 aaKnown RBP8.13□□□□□ -1.11
GDPD3-205ENST00000566613 RIOK3O14730 519 aaKnown RBP8.12□□□□□ -1.11
GDPD3-205ENST00000566613 YTHDC1Q96MU7 727 aaKnown RBP8.12□□□□□ -1.11
GDPD3-205ENST00000566613 RYDENQ9NUL5 291 aaKnown RBP8.11□□□□□ -1.11
GDPD3-205ENST00000566613 FANCIQ9NVI1 1328 aa8.1□□□□□ -1.11
GDPD3-205ENST00000566613 GTPBP6O43824 516 aaPredicted RBP8.1□□□□□ -1.11
GDPD3-205ENST00000566613 NKX1-1Q15270 411 aaPredicted RBP8.1□□□□□ -1.11
GDPD3-205ENST00000566613 WRNQ14191 1432 aaPredicted RBP eCLIP8.1□□□□□ -1.11
GDPD3-205ENST00000566613 NUBP1P53384 320 aa8.09□□□□□ -1.11
GDPD3-205ENST00000566613 CHADLQ6NUI6 762 aa8.08□□□□□ -1.12
GDPD3-205ENST00000566613 SGIP1Q9BQI5 828 aa8.08□□□□□ -1.12
GDPD3-205ENST00000566613 ABCC9O60706 1549 aa8.08□□□□□ -1.12
GDPD3-205ENST00000566613 VGFO15240 615 aaPredicted RBP8.07□□□□□ -1.12
GDPD3-205ENST00000566613 CHRM1P11229 460 aaPredicted RBP8.07□□□□□ -1.12
GDPD3-205ENST00000566613 EVX2Q03828 476 aa8.07□□□□□ -1.12
GDPD3-205ENST00000566613 ANO8Q9HCE9 1232 aaPredicted RBP8.07□□□□□ -1.12
GDPD3-205ENST00000566613 C19orf67A6NJJ6 358 aa8.04□□□□□ -1.12
GDPD3-205ENST00000566613 TIMELESSQ9UNS1 1208 aa8.04□□□□□ -1.12
GDPD3-205ENST00000566613 RBM19Q9Y4C8 960 aaKnown RBP8.04□□□□□ -1.12
GDPD3-205ENST00000566613 TMEM132AQ24JP5 1023 aa8.03□□□□□ -1.12
GDPD3-205ENST00000566613 P3H3Q8IVL6 736 aa8.03□□□□□ -1.12
GDPD3-205ENST00000566613 STK25O00506 426 aa8.02□□□□□ -1.13
GDPD3-205ENST00000566613 FAM212AQ96EL1 285 aa8.02□□□□□ -1.13
GDPD3-205ENST00000566613 TULP1O00294 542 aaPredicted RBP8.01□□□□□ -1.13
GDPD3-205ENST00000566613 DEKP35659 375 aaKnown RBP8.01□□□□□ -1.13
GDPD3-205ENST00000566613 DCAF8Q5TAQ9 597 aa8□□□□□ -1.13
GDPD3-205ENST00000566613 PKNOX2Q96KN3 472 aa7.99□□□□□ -1.13
GDPD3-205ENST00000566613 ARXQ96QS3 562 aa7.99□□□□□ -1.13
GDPD3-205ENST00000566613 SALL2Q9Y467 1007 aaPredicted RBP7.97□□□□□ -1.13
GDPD3-205ENST00000566613 FARP1Q9Y4F1 1045 aaPredicted RBP7.97□□□□□ -1.13
GDPD3-205ENST00000566613 CD44P16070 742 aaKnown RBP7.94□□□□□ -1.14
GDPD3-205ENST00000566613 MNX1P50219 401 aaPredicted RBP7.94□□□□□ -1.14
GDPD3-205ENST00000566613 RB1CC1Q8TDY2 1594 aa7.93□□□□□ -1.14
GDPD3-205ENST00000566613 BCL11BQ9C0K0 894 aaPredicted RBP7.93□□□□□ -1.14
GDPD3-205ENST00000566613 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.92□□□□□ -1.14
GDPD3-205ENST00000566613 GABBR2O75899 941 aa7.92□□□□□ -1.14
GDPD3-205ENST00000566613 NEFLP07196 543 aa7.92□□□□□ -1.14
GDPD3-205ENST00000566613 ZFP91Q96JP5 570 aaPredicted RBP7.92□□□□□ -1.14
GDPD3-205ENST00000566613 CREBZFQ9NS37 354 aa7.92□□□□□ -1.14
GDPD3-205ENST00000566613 STK24Q9Y6E0 443 aa7.92□□□□□ -1.14
GDPD3-205ENST00000566613 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.87□□□□□ -1.15
GDPD3-205ENST00000566613 RASEFQ8IZ41 740 aa7.87□□□□□ -1.15
GDPD3-205ENST00000566613 C11orf95C9JLR9 678 aaPredicted RBP7.86□□□□□ -1.15
GDPD3-205ENST00000566613 GLIPR1L2Q4G1C9 344 aa7.86□□□□□ -1.15
GDPD3-205ENST00000566613 WDR70Q9NW82 654 aa7.86□□□□□ -1.15
GDPD3-205ENST00000566613 EIF4G1Q04637 1599 aaKnown RBP7.85□□□□□ -1.15
GDPD3-205ENST00000566613 CLCN6P51797 869 aa7.85□□□□□ -1.15
GDPD3-205ENST00000566613 LMOD2Q6P5Q4 547 aa7.85□□□□□ -1.15
GDPD3-205ENST00000566613 KCNV2Q8TDN2 545 aa7.85□□□□□ -1.15
GDPD3-205ENST00000566613 PODXL2Q9NZ53 605 aa7.85□□□□□ -1.15
GDPD3-205ENST00000566613 CCDC136Q96JN2 1154 aa7.84□□□□□ -1.15
GDPD3-205ENST00000566613 RTL5Q5HYW3 569 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms