RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 RUSC2Q8N2Y8 1516 aa23.89■■□□□ 1.41
COMMD4-214ENST00000566230 ABCC10Q5T3U5 1492 aa23.81■■□□□ 1.4
COMMD4-214ENST00000566230 FAM69CQ0P6D2 419 aa23.8■■□□□ 1.4
COMMD4-214ENST00000566230 ADCY10Q96PN6 1610 aa23.78■■□□□ 1.4
COMMD4-214ENST00000566230 MAPKBP1O60336 1514 aa23.77■■□□□ 1.4
COMMD4-214ENST00000566230 NPM1P06748 294 aaKnown RBP eCLIP23.76■■□□□ 1.39
COMMD4-214ENST00000566230 IGF1RP08069 1367 aa23.75■■□□□ 1.39
COMMD4-214ENST00000566230 DIP2BQ9P265 1576 aa23.74■■□□□ 1.39
COMMD4-214ENST00000566230 KIAA0586Q9BVV6 1533 aa23.74■■□□□ 1.39
COMMD4-214ENST00000566230 CUL7Q14999 1698 aa23.67■■□□□ 1.38
COMMD4-214ENST00000566230 KIF27Q86VH2 1401 aa23.67■■□□□ 1.38
COMMD4-214ENST00000566230 TSPOAP1O95153 1857 aa23.64■■□□□ 1.37
COMMD4-214ENST00000566230 KDM6BO15054 1643 aa23.59■■□□□ 1.37
COMMD4-214ENST00000566230 PTPRGP23470 1445 aa23.58■■□□□ 1.36
COMMD4-214ENST00000566230 CARMIL1Q5VZK9 1371 aa23.55■■□□□ 1.36
COMMD4-214ENST00000566230 KDM4FA0A1W2PPD8 638 aa23.54■■□□□ 1.36
COMMD4-214ENST00000566230 TTBK1Q5TCY1 1321 aaPredicted RBP23.52■■□□□ 1.36
COMMD4-214ENST00000566230 TNIKQ9UKE5 1360 aa23.5■■□□□ 1.35
COMMD4-214ENST00000566230 ABCC2Q92887 1545 aa23.49■■□□□ 1.35
COMMD4-214ENST00000566230 CARMIL2Q6F5E8 1435 aa23.48■■□□□ 1.35
COMMD4-214ENST00000566230 IQGAP2Q13576 1575 aa23.46■■□□□ 1.35
COMMD4-214ENST00000566230 PPRC1Q5VV67 1664 aaKnown RBP23.44■■□□□ 1.34
COMMD4-214ENST00000566230 ASXL2Q76L83 1435 aa23.44■■□□□ 1.34
COMMD4-214ENST00000566230 GLI2P10070 1586 aa23.42■■□□□ 1.34
COMMD4-214ENST00000566230 UHRF1BP1LA0JNW5 1464 aa23.42■■□□□ 1.34
COMMD4-214ENST00000566230 PLB1Q6P1J6 1458 aa23.42■■□□□ 1.34
COMMD4-214ENST00000566230 DISP1Q96F81 1524 aa23.4■■□□□ 1.34
COMMD4-214ENST00000566230 UACAQ9BZF9 1416 aa23.39■■□□□ 1.33
COMMD4-214ENST00000566230 KDM5BQ9UGL1 1544 aa23.33■■□□□ 1.32
COMMD4-214ENST00000566230 UGGT2Q9NYU1 1516 aa23.32■■□□□ 1.32
COMMD4-214ENST00000566230 COL17A1Q9UMD9 1497 aaPredicted RBP23.31■■□□□ 1.32
COMMD4-214ENST00000566230 EPRSP07814 1512 aaKnown RBP23.3■■□□□ 1.32
COMMD4-214ENST00000566230 RAPGEF2Q9Y4G8 1499 aa23.3■■□□□ 1.32
COMMD4-214ENST00000566230 MAP3K4Q9Y6R4 1608 aa23.3■■□□□ 1.32
COMMD4-214ENST00000566230 ZCCHC11Q5TAX3 1644 aaKnown RBP23.28■■□□□ 1.32
COMMD4-214ENST00000566230 KIAA0556O60303 1618 aa23.26■■□□□ 1.31
COMMD4-214ENST00000566230 ADGRL1O94910 1474 aa23.24■■□□□ 1.31
COMMD4-214ENST00000566230 TEX14Q8IWB6 1497 aa23.19■■□□□ 1.3
COMMD4-214ENST00000566230 WDR7Q9Y4E6 1490 aa23.15■■□□□ 1.3
COMMD4-214ENST00000566230 CTTNBP2Q8WZ74 1663 aa23.15■■□□□ 1.3
COMMD4-214ENST00000566230 ILDR1Q86SU0 546 aaPredicted RBP23.11■■□□□ 1.29
COMMD4-214ENST00000566230 ABCA8O94911 1581 aa23.09■■□□□ 1.29
COMMD4-214ENST00000566230 GOLGA3Q08378 1498 aa23.06■■□□□ 1.28
COMMD4-214ENST00000566230 CFAP43Q8NDM7 1665 aa23.06■■□□□ 1.28
COMMD4-214ENST00000566230 MAGI3Q5TCQ9 1506 aa23.05■■□□□ 1.28
COMMD4-214ENST00000566230 KCNH8Q96L42 1107 aa23.05■■□□□ 1.28
COMMD4-214ENST00000566230 CD109Q6YHK3 1445 aa23.05■■□□□ 1.28
COMMD4-214ENST00000566230 HECW2Q9P2P5 1572 aa23.02■■□□□ 1.28
COMMD4-214ENST00000566230 PRXQ9BXM0 1461 aa23■■□□□ 1.27
COMMD4-214ENST00000566230 KIF21BO75037 1637 aa22.9■■□□□ 1.26
COMMD4-214ENST00000566230 ATP10BO94823 1461 aa22.9■■□□□ 1.26
COMMD4-214ENST00000566230 ARAP3Q8WWN8 1544 aa22.89■■□□□ 1.26
COMMD4-214ENST00000566230 ARID3CA6NKF2 412 aa22.89■■□□□ 1.25
COMMD4-214ENST00000566230 P3H3Q8IVL6 736 aa22.89■■□□□ 1.25
COMMD4-214ENST00000566230 ABCA9Q8IUA7 1624 aa22.83■■□□□ 1.25
COMMD4-214ENST00000566230 SAMD9Q5K651 1589 aa22.8■■□□□ 1.24
COMMD4-214ENST00000566230 FAM9AQ8IZU1 332 aaPredicted RBP22.79■■□□□ 1.24
COMMD4-214ENST00000566230 PHLDB1Q86UU1 1377 aa22.77■■□□□ 1.24
COMMD4-214ENST00000566230 RAPGEF6Q8TEU7 1601 aa22.77■■□□□ 1.24
COMMD4-214ENST00000566230 ADAMTSL3P82987 1691 aa22.75■■□□□ 1.23
COMMD4-214ENST00000566230 RAPGEF3O95398 923 aa22.75■■□□□ 1.23
COMMD4-214ENST00000566230 CSRNP3Q8WYN3 585 aa22.75■■□□□ 1.23
COMMD4-214ENST00000566230 NEO1Q92859 1461 aa22.73■■□□□ 1.23
COMMD4-214ENST00000566230 PTPRMP28827 1452 aa22.71■■□□□ 1.23
COMMD4-214ENST00000566230 FRMPD1Q5SYB0 1578 aa22.7■■□□□ 1.22
COMMD4-214ENST00000566230 NUP153P49790 1475 aaKnown RBP22.69■■□□□ 1.22
COMMD4-214ENST00000566230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.68■■□□□ 1.22
COMMD4-214ENST00000566230 HNRNPUL2Q1KMD3 747 aaKnown RBP22.68■■□□□ 1.22
COMMD4-214ENST00000566230 BCORL1Q5H9F3 1711 aa22.67■■□□□ 1.22
COMMD4-214ENST00000566230 MADDQ8WXG6 1647 aa22.62■■□□□ 1.21
COMMD4-214ENST00000566230 RANGAP1P46060 587 aaPredicted RBP22.62■■□□□ 1.21
COMMD4-214ENST00000566230 FHOD3Q2V2M9 1422 aa22.62■■□□□ 1.21
COMMD4-214ENST00000566230 ARID4BQ4LE39 1312 aaPredicted RBP22.59■■□□□ 1.21
COMMD4-214ENST00000566230 RICTORQ6R327 1708 aa22.59■■□□□ 1.21
COMMD4-214ENST00000566230 FBXO41Q8TF61 875 aa22.58■■□□□ 1.21
COMMD4-214ENST00000566230 PLEKHD1A6NEE1 506 aa22.57■■□□□ 1.2
COMMD4-214ENST00000566230 DENND4BO75064 1496 aaPredicted RBP22.56■■□□□ 1.2
COMMD4-214ENST00000566230 ARHGEF40Q8TER5 1519 aa22.56■■□□□ 1.2
COMMD4-214ENST00000566230 AKNAQ7Z591 1439 aa22.56■■□□□ 1.2
COMMD4-214ENST00000566230 EEA1Q15075 1411 aa22.55■■□□□ 1.2
COMMD4-214ENST00000566230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.54■■□□□ 1.2
COMMD4-214ENST00000566230 PCF11O94913 1555 aaKnown RBP22.54■■□□□ 1.2
COMMD4-214ENST00000566230 LMTK3Q96Q04 1460 aa22.54■■□□□ 1.2
COMMD4-214ENST00000566230 RIMS1Q86UR5 1692 aaKnown RBP22.53■■□□□ 1.2
COMMD4-214ENST00000566230 FANCAO15360 1455 aa22.53■■□□□ 1.2
COMMD4-214ENST00000566230 TTC37Q6PGP7 1564 aa22.51■■□□□ 1.19
COMMD4-214ENST00000566230 SIGLEC1Q9BZZ2 1709 aa22.5■■□□□ 1.19
COMMD4-214ENST00000566230 CFAP74Q9C0B2 1584 aa22.5■■□□□ 1.19
COMMD4-214ENST00000566230 EFCAB5A4FU69 1503 aa22.47■■□□□ 1.19
COMMD4-214ENST00000566230 ZMYM4Q5VZL5 1548 aa22.47■■□□□ 1.19
COMMD4-214ENST00000566230 YEATS2Q9ULM3 1422 aa22.46■■□□□ 1.19
COMMD4-214ENST00000566230 CDK13Q14004 1512 aaKnown RBP22.44■■□□□ 1.18
COMMD4-214ENST00000566230 ZFYVE16Q7Z3T8 1539 aa22.43■■□□□ 1.18
COMMD4-214ENST00000566230 HECW1Q76N89 1606 aa22.42■■□□□ 1.18
COMMD4-214ENST00000566230 HSPA2P54652 639 aa22.41■■□□□ 1.18
COMMD4-214ENST00000566230 POGZQ7Z3K3 1410 aa22.4■■□□□ 1.18
COMMD4-214ENST00000566230 PLPPR3Q6T4P5 718 aa22.4■■□□□ 1.18
COMMD4-214ENST00000566230 MAGI2Q86UL8 1455 aa22.4■■□□□ 1.18
COMMD4-214ENST00000566230 PLCH2O75038 1416 aa22.39■■□□□ 1.17
COMMD4-214ENST00000566230 SCAPERQ9BY12 1400 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms