RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 TNNT3P45378 269 aaPredicted RBP6.6□□□□□ -1.35
SMG1-211ENST00000565324 ARID4BQ4LE39 1312 aaPredicted RBP6.59□□□□□ -1.35
SMG1-211ENST00000565324 SCAF1Q9H7N4 1312 aaKnown RBP6.59□□□□□ -1.35
SMG1-211ENST00000565324 MS4A1P11836 297 aa6.58□□□□□ -1.36
SMG1-211ENST00000565324 KIAA2012Q0VF49 1180 aa6.57□□□□□ -1.36
SMG1-211ENST00000565324 FTSJ3Q8IY81 847 aaKnown RBP6.57□□□□□ -1.36
SMG1-211ENST00000565324 HSP90AB1P08238 724 aaKnown RBP6.57□□□□□ -1.36
SMG1-211ENST00000565324 GOLGA6L1Q8N7Z2 621 aa6.56□□□□□ -1.36
SMG1-211ENST00000565324 GOLGA6L4A6NEF3 574 aa6.56□□□□□ -1.36
SMG1-211ENST00000565324 STAG3Q9UJ98 1225 aa6.56□□□□□ -1.36
SMG1-211ENST00000565324 DRC7Q8IY82 874 aa6.55□□□□□ -1.36
SMG1-211ENST00000565324 SALL2Q9Y467 1007 aaPredicted RBP6.55□□□□□ -1.36
SMG1-211ENST00000565324 CFAP53Q96M91 514 aa6.55□□□□□ -1.36
SMG1-211ENST00000565324 SETQ01105 290 aaPredicted RBP6.55□□□□□ -1.36
SMG1-211ENST00000565324 SYAP1Q96A49 352 aaPredicted RBP6.55□□□□□ -1.36
SMG1-211ENST00000565324 EIF4G2P78344 907 aaKnown RBP eCLIP6.54□□□□□ -1.36
SMG1-211ENST00000565324 PPP4R2Q9NY27 417 aa6.54□□□□□ -1.36
SMG1-211ENST00000565324 HSCBQ8IWL3 235 aa6.54□□□□□ -1.36
SMG1-211ENST00000565324 PLCB2Q00722 1185 aa6.54□□□□□ -1.36
SMG1-211ENST00000565324 CDCA8Q53HL2 280 aa6.53□□□□□ -1.36
SMG1-211ENST00000565324 PNNQ9H307 717 aaKnown RBP6.53□□□□□ -1.36
SMG1-211ENST00000565324 CALRP27797 417 aaKnown RBP6.53□□□□□ -1.36
SMG1-211ENST00000565324 RTN4Q9NQC3 1192 aaKnown RBP6.52□□□□□ -1.37
SMG1-211ENST00000565324 HTATSF1O43719 755 aaKnown RBP6.52□□□□□ -1.37
SMG1-211ENST00000565324 MCCP23508 829 aa6.52□□□□□ -1.37
SMG1-211ENST00000565324 NOC3LQ8WTT2 800 aaKnown RBP6.52□□□□□ -1.37
SMG1-211ENST00000565324 FGD1P98174 961 aa6.52□□□□□ -1.37
SMG1-211ENST00000565324 DEKP35659 375 aaKnown RBP6.51□□□□□ -1.37
SMG1-211ENST00000565324 GBP4Q96PP9 640 aa6.51□□□□□ -1.37
SMG1-211ENST00000565324 ZNF777Q9ULD5 760 aaPredicted RBP6.5□□□□□ -1.37
SMG1-211ENST00000565324 RSPH6AQ9H0K4 717 aa6.5□□□□□ -1.37
SMG1-211ENST00000565324 IRX6P78412 446 aaPredicted RBP6.49□□□□□ -1.37
SMG1-211ENST00000565324 PHF14O94880 888 aa6.49□□□□□ -1.37
SMG1-211ENST00000565324 KCNJ4P48050 445 aa6.49□□□□□ -1.37
SMG1-211ENST00000565324 CCDC34Q96HJ3 373 aa6.49□□□□□ -1.37
SMG1-211ENST00000565324 LAS1LQ9Y4W2 734 aaKnown RBP6.49□□□□□ -1.37
SMG1-211ENST00000565324 AMER1Q5JTC6 1135 aaPredicted RBP6.49□□□□□ -1.37
SMG1-211ENST00000565324 KNSTRNQ9Y448 316 aa6.49□□□□□ -1.37
SMG1-211ENST00000565324 CSRNP3Q8WYN3 585 aa6.49□□□□□ -1.37
SMG1-211ENST00000565324 FBLN2P98095 1184 aa6.48□□□□□ -1.37
SMG1-211ENST00000565324 TPM4P67936 248 aa6.48□□□□□ -1.37
SMG1-211ENST00000565324 MIER1Q8N108 512 aa6.48□□□□□ -1.37
SMG1-211ENST00000565324 A0A0U1RQG5 324 aaPredicted RBP6.48□□□□□ -1.37
SMG1-211ENST00000565324 CHGAP10645 457 aaKnown RBP6.47□□□□□ -1.37
SMG1-211ENST00000565324 CSPP1Q1MSJ5 1256 aa6.47□□□□□ -1.37
SMG1-211ENST00000565324 HAP1P54257 671 aaPredicted RBP6.47□□□□□ -1.37
SMG1-211ENST00000565324 RSF1Q96T23 1441 aaPredicted RBP6.47□□□□□ -1.37
SMG1-211ENST00000565324 HSP90AA2PQ14568 343 aaPredicted RBP6.46□□□□□ -1.37
SMG1-211ENST00000565324 MTUS2Q5JR59 1369 aa6.46□□□□□ -1.37
SMG1-211ENST00000565324 SUPT16HQ9Y5B9 1047 aaKnown RBP6.46□□□□□ -1.37
SMG1-211ENST00000565324 GNL2Q13823 731 aaKnown RBP6.46□□□□□ -1.38
SMG1-211ENST00000565324 GOLGA6L3A6NEY3 463 aa6.46□□□□□ -1.38
SMG1-211ENST00000565324 MAPK8IP3Q9UPT6 1336 aa6.45□□□□□ -1.38
SMG1-211ENST00000565324 GPS2Q13227 327 aa6.45□□□□□ -1.38
SMG1-211ENST00000565324 NUDCQ9Y266 331 aa6.45□□□□□ -1.38
SMG1-211ENST00000565324 RGS3P49796 1198 aa6.45□□□□□ -1.38
SMG1-211ENST00000565324 TSPY4P0CV99 314 aa6.44□□□□□ -1.38
SMG1-211ENST00000565324 TSPY10P0CW01 314 aa6.44□□□□□ -1.38
SMG1-211ENST00000565324 OS9Q13438 667 aaPredicted RBP6.44□□□□□ -1.38
SMG1-211ENST00000565324 CCDC70Q6NSX1 233 aa6.43□□□□□ -1.38
SMG1-211ENST00000565324 NPM1P06748 294 aaKnown RBP eCLIP6.43□□□□□ -1.38
SMG1-211ENST00000565324 GOLGA2Q08379 1002 aa6.43□□□□□ -1.38
SMG1-211ENST00000565324 TPRNQ4KMQ1 711 aa6.43□□□□□ -1.38
SMG1-211ENST00000565324 KIF3AQ9Y496 699 aa6.42□□□□□ -1.38
SMG1-211ENST00000565324 TULP1O00294 542 aaPredicted RBP6.42□□□□□ -1.38
SMG1-211ENST00000565324 NAP1L2Q9ULW6 460 aaPredicted RBP6.42□□□□□ -1.38
SMG1-211ENST00000565324 KIAA1211Q6ZU35 1233 aa6.42□□□□□ -1.38
SMG1-211ENST00000565324 CLSTN1O94985 981 aa6.42□□□□□ -1.38
SMG1-211ENST00000565324 P3H3Q8IVL6 736 aa6.42□□□□□ -1.38
SMG1-211ENST00000565324 TPM3P06753 285 aa6.41□□□□□ -1.38
SMG1-211ENST00000565324 EEA1Q15075 1411 aa6.41□□□□□ -1.38
SMG1-211ENST00000565324 CLIP1P30622 1438 aa6.41□□□□□ -1.38
SMG1-211ENST00000565324 TEX35Q5T0J7 233 aa6.41□□□□□ -1.38
SMG1-211ENST00000565324 KDM2AQ9Y2K7 1162 aa6.41□□□□□ -1.38
SMG1-211ENST00000565324 CHMP4AQ9BY43 222 aa6.41□□□□□ -1.38
SMG1-211ENST00000565324 NOM1Q5C9Z4 860 aaKnown RBP6.41□□□□□ -1.38
SMG1-211ENST00000565324 CEP89Q96ST8 783 aa6.4□□□□□ -1.38
SMG1-211ENST00000565324 MTERF4Q7Z6M4 381 aaKnown RBP6.4□□□□□ -1.39
SMG1-211ENST00000565324 TCERG1O14776 1098 aaKnown RBP6.4□□□□□ -1.39
SMG1-211ENST00000565324 DDX11L8A8MPP1 907 aa6.39□□□□□ -1.39
SMG1-211ENST00000565324 TSR1Q2NL82 804 aaKnown RBP6.39□□□□□ -1.39
SMG1-211ENST00000565324 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.39□□□□□ -1.393e-7■□□□□ 10.9
SMG1-211ENST00000565324 CALD1Q05682 793 aaKnown RBP6.39□□□□□ -1.39
SMG1-211ENST00000565324 SKOR2Q2VWA4 1001 aaPredicted RBP6.39□□□□□ -1.39
SMG1-211ENST00000565324 IPO8O15397 1037 aaKnown RBP6.38□□□□□ -1.39
SMG1-211ENST00000565324 CHMP4CQ96CF2 233 aa6.38□□□□□ -1.39
SMG1-211ENST00000565324 RBM19Q9Y4C8 960 aaKnown RBP6.38□□□□□ -1.39
SMG1-211ENST00000565324 ATP6V1DQ9Y5K8 247 aa6.38□□□□□ -1.39
SMG1-211ENST00000565324 A0A0G2JS52 829 aa6.38□□□□□ -1.39
SMG1-211ENST00000565324 PPP1R15AO75807 674 aaPredicted RBP6.38□□□□□ -1.39
SMG1-211ENST00000565324 ZNF771Q7L3S4 317 aaPredicted RBP6.38□□□□□ -1.39
SMG1-211ENST00000565324 ARID3CA6NKF2 412 aa6.38□□□□□ -1.39
SMG1-211ENST00000565324 HDAC5Q9UQL6 1122 aa6.38□□□□□ -1.39
SMG1-211ENST00000565324 FRAT1Q92837 279 aaPredicted RBP6.37□□□□□ -1.39
SMG1-211ENST00000565324 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.37□□□□□ -1.39
SMG1-211ENST00000565324 GZF1Q9H116 711 aaPredicted RBP6.37□□□□□ -1.39
SMG1-211ENST00000565324 GOLGA3Q08378 1498 aa6.37□□□□□ -1.39
SMG1-211ENST00000565324 C14orf37Q86TY3 774 aa6.37□□□□□ -1.39
SMG1-211ENST00000565324 TPM1P09493 284 aa6.36□□□□□ -1.39
SMG1-211ENST00000565324 HMMRO75330 724 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms