RNA–Protein interactions for RNA: ENST00000564572.1

CNN2-206, Transcript of calponin 2, humanhuman

Gene CNN2, Length 2,266 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-206ENST00000564572 ZNF608Q9ULD9 1512 aaPredicted RBP22.43■■□□□ 1.18
CNN2-206ENST00000564572 HRCP23327 699 aa22.43■■□□□ 1.18
CNN2-206ENST00000564572 FHAD1B1AJZ9 1412 aa22.42■■□□□ 1.18
CNN2-206ENST00000564572 EIF4G3O43432 1585 aaKnown RBP22.42■■□□□ 1.18
CNN2-206ENST00000564572 APLP2Q06481 763 aa22.38■■□□□ 1.17
CNN2-206ENST00000564572 SAMD9Q5K651 1589 aa22.34■■□□□ 1.17
CNN2-206ENST00000564572 TTBK1Q5TCY1 1321 aaPredicted RBP22.33■■□□□ 1.17
CNN2-206ENST00000564572 MAP3K1Q13233 1512 aa22.29■■□□□ 1.16
CNN2-206ENST00000564572 SNAPC4Q5SXM2 1469 aa22.29■■□□□ 1.16
CNN2-206ENST00000564572 PCF11O94913 1555 aaKnown RBP22.27■■□□□ 1.16
CNN2-206ENST00000564572 FHOD3Q2V2M9 1422 aa22.26■■□□□ 1.15
CNN2-206ENST00000564572 MAGI1Q96QZ7 1491 aaPredicted RBP22.26■■□□□ 1.15
CNN2-206ENST00000564572 IQGAP2Q13576 1575 aa22.25■■□□□ 1.15
CNN2-206ENST00000564572 TIAM1Q13009 1591 aa22.24■■□□□ 1.15
CNN2-206ENST00000564572 CFAP43Q8NDM7 1665 aa22.23■■□□□ 1.15
CNN2-206ENST00000564572 FYCO1Q9BQS8 1478 aa22.22■■□□□ 1.15
CNN2-206ENST00000564572 GRIN2AQ12879 1464 aa22.2■■□□□ 1.14
CNN2-206ENST00000564572 FMN1Q68DA7 1419 aa22.19■■□□□ 1.14
CNN2-206ENST00000564572 CASKIN1Q8WXD9 1431 aa22.18■■□□□ 1.14
CNN2-206ENST00000564572 KANK4Q5T7N3 995 aaPredicted RBP22.17■■□□□ 1.14
CNN2-206ENST00000564572 P3H3Q8IVL6 736 aa22.17■■□□□ 1.14
CNN2-206ENST00000564572 SYNJ2O15056 1496 aa22.16■■□□□ 1.14
CNN2-206ENST00000564572 UGGT2Q9NYU1 1516 aa22.15■■□□□ 1.14
CNN2-206ENST00000564572 KIAA0586Q9BVV6 1533 aa22.14■■□□□ 1.13
CNN2-206ENST00000564572 LRRC9Q6ZRR7 1453 aa22.11■■□□□ 1.13
CNN2-206ENST00000564572 CEP170Q5SW79 1584 aa22.07■■□□□ 1.12
CNN2-206ENST00000564572 RRBP1Q9P2E9 1410 aaKnown RBP22.07■■□□□ 1.12
CNN2-206ENST00000564572 LRRIQ1Q96JM4 1722 aa22.05■■□□□ 1.12
CNN2-206ENST00000564572 ZEB1P37275 1124 aaPredicted RBP22.05■■□□□ 1.12
CNN2-206ENST00000564572 KIAA0556O60303 1618 aa22.03■■□□□ 1.12
CNN2-206ENST00000564572 NUP160Q12769 1436 aa22.03■■□□□ 1.12
CNN2-206ENST00000564572 CHMP7Q8WUX9 453 aaPredicted RBP22.01■■□□□ 1.11
CNN2-206ENST00000564572 DISP1Q96F81 1524 aa22■■□□□ 1.11
CNN2-206ENST00000564572 HECW1Q76N89 1606 aa21.99■■□□□ 1.11
CNN2-206ENST00000564572 CCDC18Q5T9S5 1454 aa21.95■■□□□ 1.1
CNN2-206ENST00000564572 ATP1B4Q9UN42 357 aaPredicted RBP21.94■■□□□ 1.1
CNN2-206ENST00000564572 CCNB3Q8WWL7 1395 aa21.94■■□□□ 1.1
CNN2-206ENST00000564572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.92■■□□□ 1.1
CNN2-206ENST00000564572 HNRNPUL2Q1KMD3 747 aaKnown RBP21.91■■□□□ 1.1
CNN2-206ENST00000564572 CHD1O14646 1710 aa21.9■■□□□ 1.1
CNN2-206ENST00000564572 PHLDB1Q86UU1 1377 aa21.9■■□□□ 1.1
CNN2-206ENST00000564572 FBLN2P98095 1184 aa21.9■■□□□ 1.1
CNN2-206ENST00000564572 EHBP1L1Q8N3D4 1523 aa21.89■■□□□ 1.09
CNN2-206ENST00000564572 CCER1Q8TC90 406 aaPredicted RBP21.87■■□□□ 1.09
CNN2-206ENST00000564572 EPRSP07814 1512 aaKnown RBP21.86■■□□□ 1.09
CNN2-206ENST00000564572 SUPT6HQ7KZ85 1726 aaKnown RBP21.85■■□□□ 1.09
CNN2-206ENST00000564572 RAPGEF6Q8TEU7 1601 aa21.85■■□□□ 1.09
CNN2-206ENST00000564572 MTUS2Q5JR59 1369 aa21.84■■□□□ 1.09
CNN2-206ENST00000564572 CARMIL2Q6F5E8 1435 aa21.82■■□□□ 1.08
CNN2-206ENST00000564572 MAGI3Q5TCQ9 1506 aa21.82■■□□□ 1.08
CNN2-206ENST00000564572 ARHGEF11O15085 1522 aa21.79■■□□□ 1.08
CNN2-206ENST00000564572 JPH4Q96JJ6 628 aa21.79■■□□□ 1.08
CNN2-206ENST00000564572 CDK13Q14004 1512 aaKnown RBP21.78■■□□□ 1.08
CNN2-206ENST00000564572 NCOA2Q15596 1464 aa21.78■■□□□ 1.08
CNN2-206ENST00000564572 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.77■■□□□ 1.08
CNN2-206ENST00000564572 NUP153P49790 1475 aaKnown RBP21.77■■□□□ 1.08
CNN2-206ENST00000564572 SHROOM2Q13796 1616 aa21.74■■□□□ 1.07
CNN2-206ENST00000564572 FGD6Q6ZV73 1430 aa21.74■■□□□ 1.07
CNN2-206ENST00000564572 MYOM3Q5VTT5 1437 aa21.72■■□□□ 1.07
CNN2-206ENST00000564572 ABCA8O94911 1581 aa21.69■■□□□ 1.06
CNN2-206ENST00000564572 PLB1Q6P1J6 1458 aa21.69■■□□□ 1.06
CNN2-206ENST00000564572 PRG4Q92954 1404 aaPredicted RBP21.67■■□□□ 1.06
CNN2-206ENST00000564572 FAM50AQ14320 339 aaKnown RBP21.65■■□□□ 1.06
CNN2-206ENST00000564572 PTPN23Q9H3S7 1636 aa21.64■■□□□ 1.05
CNN2-206ENST00000564572 CLASP1Q7Z460 1538 aa21.64■■□□□ 1.05
CNN2-206ENST00000564572 TCOF1Q13428 1488 aaKnown RBP21.61■■□□□ 1.05
CNN2-206ENST00000564572 ITGAEP38570 1179 aa21.61■■□□□ 1.05
CNN2-206ENST00000564572 ADCY10Q96PN6 1610 aa21.6■■□□□ 1.05
CNN2-206ENST00000564572 DHX57Q6P158 1386 aaKnown RBP21.59■■□□□ 1.05
CNN2-206ENST00000564572 MIA2Q96PC5 1412 aa21.58■■□□□ 1.04
CNN2-206ENST00000564572 TROQ12816 1431 aaPredicted RBP21.57■■□□□ 1.04
CNN2-206ENST00000564572 SETD5Q9C0A6 1442 aa21.57■■□□□ 1.04
CNN2-206ENST00000564572 ARID3CA6NKF2 412 aa21.57■■□□□ 1.04
CNN2-206ENST00000564572 CDK11AQ9UQ88 783 aaPredicted RBP21.57■■□□□ 1.04
CNN2-206ENST00000564572 CLSPNQ9HAW4 1339 aa21.56■■□□□ 1.04
CNN2-206ENST00000564572 RAB3GAP2Q9H2M9 1393 aa21.56■■□□□ 1.04
CNN2-206ENST00000564572 PTPRGP23470 1445 aa21.55■■□□□ 1.04
CNN2-206ENST00000564572 ERCC6L2Q5T890 1561 aa21.51■■□□□ 1.03
CNN2-206ENST00000564572 ATP10BO94823 1461 aa21.51■■□□□ 1.03
CNN2-206ENST00000564572 ITSN2Q9NZM3 1697 aa21.51■■□□□ 1.03
CNN2-206ENST00000564572 KIF14Q15058 1648 aa21.49■■□□□ 1.03
CNN2-206ENST00000564572 PTPRKQ15262 1439 aa21.49■■□□□ 1.03
CNN2-206ENST00000564572 HFM1A2PYH4 1435 aa21.46■■□□□ 1.03
CNN2-206ENST00000564572 UACAQ9BZF9 1416 aa21.46■■□□□ 1.03
CNN2-206ENST00000564572 ABCC2Q92887 1545 aa21.43■■□□□ 1.02
CNN2-206ENST00000564572 GCC2Q8IWJ2 1684 aa21.42■■□□□ 1.02
CNN2-206ENST00000564572 AKNAQ7Z591 1439 aa21.42■■□□□ 1.02
CNN2-206ENST00000564572 DNMT1P26358 1616 aaKnown RBP21.41■■□□□ 1.02
CNN2-206ENST00000564572 MAPKBP1O60336 1514 aa21.4■■□□□ 1.02
CNN2-206ENST00000564572 GPATCH8Q9UKJ3 1502 aaKnown RBP21.4■■□□□ 1.02
CNN2-206ENST00000564572 ABCC10Q5T3U5 1492 aa21.39■■□□□ 1.02
CNN2-206ENST00000564572 CDC42BPAQ5VT25 1732 aa21.39■■□□□ 1.01
CNN2-206ENST00000564572 NAIPQ13075 1403 aa21.39■■□□□ 1.01
CNN2-206ENST00000564572 PLEKHD1A6NEE1 506 aa21.38■■□□□ 1.01
CNN2-206ENST00000564572 UHRF1BP1LA0JNW5 1464 aa21.36■■□□□ 1.01
CNN2-206ENST00000564572 CAMSAP2Q08AD1 1489 aa21.35■■□□□ 1.01
CNN2-206ENST00000564572 DAPK1P53355 1430 aa21.35■■□□□ 1.01
CNN2-206ENST00000564572 CROCC2H7BZ55 1655 aa21.31■■□□□ 1
CNN2-206ENST00000564572 ABCC5O15440 1437 aa21.31■■□□□ 1
CNN2-206ENST00000564572 ROCK1Q13464 1354 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms