RNA–Protein interactions for RNA: ENST00000563328.4

AC004943.2-201, humanhuman

TSL 3 BASIC

Gene AC004943.2, Length 4,842 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.2-201ENST00000563328 HSP90AA1P07900 732 aaKnown RBP20.72■□□□□ 0.91
AC004943.2-201ENST00000563328 ZNF326Q5BKZ1 582 aaKnown RBP20.71■□□□□ 0.91
AC004943.2-201ENST00000563328 SALL2Q9Y467 1007 aaPredicted RBP20.7■□□□□ 0.9
AC004943.2-201ENST00000563328 RSPH6AQ9H0K4 717 aa20.67■□□□□ 0.9
AC004943.2-201ENST00000563328 ARXQ96QS3 562 aa20.67■□□□□ 0.9
AC004943.2-201ENST00000563328 CEP162Q5TB80 1403 aa20.66■□□□□ 0.9
AC004943.2-201ENST00000563328 CCDC88BA6NC98 1476 aa20.66■□□□□ 0.9
AC004943.2-201ENST00000563328 PPM1GO15355 546 aaPredicted RBP20.66■□□□□ 0.9
AC004943.2-201ENST00000563328 TRIM44Q96DX7 344 aaPredicted RBP20.64■□□□□ 0.89
AC004943.2-201ENST00000563328 SOGA1O94964 1423 aa20.63■□□□□ 0.89
AC004943.2-201ENST00000563328 HSP90AA2PQ14568 343 aaPredicted RBP20.62■□□□□ 0.89
AC004943.2-201ENST00000563328 AMER1Q5JTC6 1135 aaPredicted RBP20.62■□□□□ 0.89
AC004943.2-201ENST00000563328 EEA1Q15075 1411 aa20.61■□□□□ 0.89
AC004943.2-201ENST00000563328 GOLGA3Q08378 1498 aa20.59■□□□□ 0.89
AC004943.2-201ENST00000563328 CHMP7Q8WUX9 453 aaPredicted RBP20.59■□□□□ 0.89
AC004943.2-201ENST00000563328 WIZO95785 1651 aa20.58■□□□□ 0.88
AC004943.2-201ENST00000563328 CHIC2Q9UKJ5 165 aa20.57■□□□□ 0.88
AC004943.2-201ENST00000563328 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
AC004943.2-201ENST00000563328 TIMELESSQ9UNS1 1208 aa20.55■□□□□ 0.88
AC004943.2-201ENST00000563328 KIF27Q86VH2 1401 aa20.54■□□□□ 0.88
AC004943.2-201ENST00000563328 SLC4A1APQ9BWU0 796 aaKnown RBP20.53■□□□□ 0.88
AC004943.2-201ENST00000563328 TNIKQ9UKE5 1360 aa20.52■□□□□ 0.88
AC004943.2-201ENST00000563328 LAS1LQ9Y4W2 734 aaKnown RBP20.49■□□□□ 0.87
AC004943.2-201ENST00000563328 MTUS2Q5JR59 1369 aa20.46■□□□□ 0.87
AC004943.2-201ENST00000563328 CEP164Q9UPV0 1460 aa20.45■□□□□ 0.86
AC004943.2-201ENST00000563328 PDE4CQ08493 712 aa20.45■□□□□ 0.86
AC004943.2-201ENST00000563328 PNNQ9H307 717 aaKnown RBP20.45■□□□□ 0.86
AC004943.2-201ENST00000563328 ARID4BQ4LE39 1312 aaPredicted RBP20.43■□□□□ 0.86
AC004943.2-201ENST00000563328 IRX6P78412 446 aaPredicted RBP20.43■□□□□ 0.86
AC004943.2-201ENST00000563328 DDRGK1Q96HY6 314 aa20.41■□□□□ 0.86
AC004943.2-201ENST00000563328 HNRNPUQ00839 825 aaKnown RBP eCLIP20.39■□□□□ 0.85
AC004943.2-201ENST00000563328 SMARCA2P51531 1590 aa20.37■□□□□ 0.85
AC004943.2-201ENST00000563328 CUX2O14529 1486 aa20.36■□□□□ 0.85
AC004943.2-201ENST00000563328 TOP2AP11388 1531 aaKnown RBP20.35■□□□□ 0.85
AC004943.2-201ENST00000563328 ATAD2BQ9ULI0 1458 aa20.34■□□□□ 0.85
AC004943.2-201ENST00000563328 PLEKHG5O94827 1062 aa20.32■□□□□ 0.84
AC004943.2-201ENST00000563328 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
AC004943.2-201ENST00000563328 CARMIL1Q5VZK9 1371 aa20.32■□□□□ 0.84
AC004943.2-201ENST00000563328 TONSLQ96HA7 1378 aa20.31■□□□□ 0.84
AC004943.2-201ENST00000563328 SMARCA4P51532 1647 aa20.28■□□□□ 0.84
AC004943.2-201ENST00000563328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.27■□□□□ 0.84
AC004943.2-201ENST00000563328 ERCC6Q03468 1493 aa20.26■□□□□ 0.83
AC004943.2-201ENST00000563328 NPM1P06748 294 aaKnown RBP eCLIP20.25■□□□□ 0.83
AC004943.2-201ENST00000563328 KCNH8Q96L42 1107 aa20.25■□□□□ 0.83
AC004943.2-201ENST00000563328 HIRIP3Q9BW71 556 aaPredicted RBP20.25■□□□□ 0.83
AC004943.2-201ENST00000563328 DDX10Q13206 875 aaKnown RBP20.25■□□□□ 0.83
AC004943.2-201ENST00000563328 L1TD1Q5T7N2 865 aaKnown RBP20.24■□□□□ 0.83
AC004943.2-201ENST00000563328 TSPY4P0CV99 314 aa20.23■□□□□ 0.83
AC004943.2-201ENST00000563328 TSPY10P0CW01 314 aa20.23■□□□□ 0.83
AC004943.2-201ENST00000563328 TDRD9Q8NDG6 1382 aaKnown RBP20.22■□□□□ 0.83
AC004943.2-201ENST00000563328 FANCIQ9NVI1 1328 aa20.19■□□□□ 0.82
AC004943.2-201ENST00000563328 PPP4R2Q9NY27 417 aa20.19■□□□□ 0.82
AC004943.2-201ENST00000563328 CADPSQ9ULU8 1353 aa20.19■□□□□ 0.82
AC004943.2-201ENST00000563328 IL27Q8NEV9 243 aa20.19■□□□□ 0.82
AC004943.2-201ENST00000563328 PLEKHD1A6NEE1 506 aa20.18■□□□□ 0.82
AC004943.2-201ENST00000563328 UPF2Q9HAU5 1272 aaKnown RBP20.17■□□□□ 0.82
AC004943.2-201ENST00000563328 KANK4Q5T7N3 995 aaPredicted RBP20.16■□□□□ 0.82
AC004943.2-201ENST00000563328 RUSC2Q8N2Y8 1516 aa20.16■□□□□ 0.82
AC004943.2-201ENST00000563328 CHGAP10645 457 aaKnown RBP20.15■□□□□ 0.82
AC004943.2-201ENST00000563328 USP35Q9P2H5 1018 aa20.13■□□□□ 0.81
AC004943.2-201ENST00000563328 CANXP27824 592 aaKnown RBP20.12■□□□□ 0.81
AC004943.2-201ENST00000563328 PTMSP20962 102 aa20.12■□□□□ 0.81
AC004943.2-201ENST00000563328 KDM2AQ9Y2K7 1162 aa20.12■□□□□ 0.81
AC004943.2-201ENST00000563328 DNTTIP2Q5QJE6 756 aaKnown RBP20.1■□□□□ 0.81
AC004943.2-201ENST00000563328 ZMYND15Q9H091 742 aa20.1■□□□□ 0.81
AC004943.2-201ENST00000563328 ARID3AQ99856 593 aa20.1■□□□□ 0.81
AC004943.2-201ENST00000563328 CFDP1Q9UEE9 299 aaPredicted RBP20.1■□□□□ 0.81
AC004943.2-201ENST00000563328 TNNT3P45378 269 aaPredicted RBP20.09■□□□□ 0.81
AC004943.2-201ENST00000563328 PDS5BQ9NTI5 1447 aa20.09■□□□□ 0.81
AC004943.2-201ENST00000563328 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
AC004943.2-201ENST00000563328 PDIA4P13667 645 aaKnown RBP20.06■□□□□ 0.8
AC004943.2-201ENST00000563328 VPS8Q8N3P4 1428 aa20.06■□□□□ 0.8
AC004943.2-201ENST00000563328 BECN1Q14457 450 aa20.06■□□□□ 0.8
AC004943.2-201ENST00000563328 IPO9Q96P70 1041 aaKnown RBP20.05■□□□□ 0.8
AC004943.2-201ENST00000563328 SIN3AQ96ST3 1273 aa20.05■□□□□ 0.8
AC004943.2-201ENST00000563328 RAPGEF2Q9Y4G8 1499 aa20.02■□□□□ 0.8
AC004943.2-201ENST00000563328 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
AC004943.2-201ENST00000563328 APPP05067 770 aa20.01■□□□□ 0.79
AC004943.2-201ENST00000563328 CCNB3Q8WWL7 1395 aa20.01■□□□□ 0.79
AC004943.2-201ENST00000563328 BICRAQ9NZM4 1560 aa20■□□□□ 0.79
AC004943.2-201ENST00000563328 MSNP26038 577 aaKnown RBP20■□□□□ 0.79
AC004943.2-201ENST00000563328 FHAD1B1AJZ9 1412 aa20■□□□□ 0.79
AC004943.2-201ENST00000563328 GSE1Q14687 1217 aa19.99■□□□□ 0.79
AC004943.2-201ENST00000563328 B4GALNT3Q6L9W6 998 aa19.98■□□□□ 0.79
AC004943.2-201ENST00000563328 UNC13AQ9UPW8 1703 aa19.96■□□□□ 0.79
AC004943.2-201ENST00000563328 FAM9BQ8IZU0 186 aa19.96■□□□□ 0.79
AC004943.2-201ENST00000563328 ESF1Q9H501 851 aaKnown RBP19.95■□□□□ 0.78
AC004943.2-201ENST00000563328 SENP3Q9H4L4 574 aaPredicted RBP19.95■□□□□ 0.78
AC004943.2-201ENST00000563328 RGL3Q3MIN7 710 aa19.94■□□□□ 0.78
AC004943.2-201ENST00000563328 PTMAP06454 111 aaKnown RBP19.93■□□□□ 0.78
AC004943.2-201ENST00000563328 STAG3Q9UJ98 1225 aa19.93■□□□□ 0.78
AC004943.2-201ENST00000563328 RRP9O43818 475 aaKnown RBP19.91■□□□□ 0.78
AC004943.2-201ENST00000563328 FANCD2Q9BXW9 1451 aa19.9■□□□□ 0.78
AC004943.2-201ENST00000563328 EIF4G2P78344 907 aaKnown RBP eCLIP19.87■□□□□ 0.77
AC004943.2-201ENST00000563328 NCAPD3P42695 1498 aa19.85■□□□□ 0.77
AC004943.2-201ENST00000563328 FHOD3Q2V2M9 1422 aa19.85■□□□□ 0.77
AC004943.2-201ENST00000563328 GOLGA6L22H0YM25 854 aa19.84■□□□□ 0.77
AC004943.2-201ENST00000563328 BRPF3Q9ULD4 1205 aa19.82■□□□□ 0.76
AC004943.2-201ENST00000563328 TAF7LQ5H9L4 462 aa19.79■□□□□ 0.76
AC004943.2-201ENST00000563328 FAM43AQ8N2R8 423 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms