RNA–Protein interactions for RNA: ENST00000562953.5

POLR2C-203, Transcript of RNA polymerase II subunit C, humanhuman

TSL 2

Gene POLR2C, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-203ENST00000562953 TOP2BQ02880 1626 aa22.54■■□□□ 1.2
POLR2C-203ENST00000562953 KDM4FA0A1W2PPD8 638 aa22.52■■□□□ 1.2
POLR2C-203ENST00000562953 BIVM-ERCC5R4GMW8 1640 aa22.51■■□□□ 1.19
POLR2C-203ENST00000562953 MAPKBP1O60336 1514 aa22.5■■□□□ 1.19
POLR2C-203ENST00000562953 SUPT5HO00267 1087 aaKnown RBP22.46■■□□□ 1.19
POLR2C-203ENST00000562953 DIP2BQ9P265 1576 aa22.44■■□□□ 1.18
POLR2C-203ENST00000562953 KDM6BO15054 1643 aa22.42■■□□□ 1.18
POLR2C-203ENST00000562953 ILDR1Q86SU0 546 aaPredicted RBP22.4■■□□□ 1.18
POLR2C-203ENST00000562953 RUSC2Q8N2Y8 1516 aa22.39■■□□□ 1.17
POLR2C-203ENST00000562953 ADCY10Q96PN6 1610 aa22.39■■□□□ 1.17
POLR2C-203ENST00000562953 KIAA0586Q9BVV6 1533 aa22.33■■□□□ 1.17
POLR2C-203ENST00000562953 TSPOAP1O95153 1857 aa22.3■■□□□ 1.16
POLR2C-203ENST00000562953 PTPRGP23470 1445 aa22.27■■□□□ 1.16
POLR2C-203ENST00000562953 IGF1RP08069 1367 aa22.24■■□□□ 1.15
POLR2C-203ENST00000562953 TTBK1Q5TCY1 1321 aaPredicted RBP22.2■■□□□ 1.14
POLR2C-203ENST00000562953 PLB1Q6P1J6 1458 aa22.18■■□□□ 1.14
POLR2C-203ENST00000562953 CARMIL2Q6F5E8 1435 aa22.17■■□□□ 1.14
POLR2C-203ENST00000562953 ABCC2Q92887 1545 aa22.16■■□□□ 1.14
POLR2C-203ENST00000562953 KIF27Q86VH2 1401 aa22.16■■□□□ 1.14
POLR2C-203ENST00000562953 TNIKQ9UKE5 1360 aa22.16■■□□□ 1.14
POLR2C-203ENST00000562953 ASXL2Q76L83 1435 aa22.15■■□□□ 1.14
POLR2C-203ENST00000562953 ADGRL1O94910 1474 aa22.15■■□□□ 1.14
POLR2C-203ENST00000562953 GLI2P10070 1586 aa22.13■■□□□ 1.13
POLR2C-203ENST00000562953 CUL7Q14999 1698 aa22.13■■□□□ 1.13
POLR2C-203ENST00000562953 CARMIL1Q5VZK9 1371 aa22.08■■□□□ 1.12
POLR2C-203ENST00000562953 UHRF1BP1LA0JNW5 1464 aa22.07■■□□□ 1.12
POLR2C-203ENST00000562953 PPRC1Q5VV67 1664 aaKnown RBP22.06■■□□□ 1.12
POLR2C-203ENST00000562953 UACAQ9BZF9 1416 aa22.05■■□□□ 1.12
POLR2C-203ENST00000562953 COL17A1Q9UMD9 1497 aaPredicted RBP22.04■■□□□ 1.12
POLR2C-203ENST00000562953 TEX14Q8IWB6 1497 aa22.02■■□□□ 1.12
POLR2C-203ENST00000562953 EPRSP07814 1512 aaKnown RBP22■■□□□ 1.11
POLR2C-203ENST00000562953 HECW2Q9P2P5 1572 aa21.99■■□□□ 1.11
POLR2C-203ENST00000562953 IQGAP2Q13576 1575 aa21.98■■□□□ 1.11
POLR2C-203ENST00000562953 KDM5BQ9UGL1 1544 aa21.97■■□□□ 1.11
POLR2C-203ENST00000562953 MAP3K4Q9Y6R4 1608 aa21.95■■□□□ 1.1
POLR2C-203ENST00000562953 DISP1Q96F81 1524 aa21.92■■□□□ 1.1
POLR2C-203ENST00000562953 ZCCHC11Q5TAX3 1644 aaKnown RBP21.85■■□□□ 1.09
POLR2C-203ENST00000562953 UGGT2Q9NYU1 1516 aa21.84■■□□□ 1.09
POLR2C-203ENST00000562953 WDR7Q9Y4E6 1490 aa21.83■■□□□ 1.08
POLR2C-203ENST00000562953 FBXO41Q8TF61 875 aa21.82■■□□□ 1.08
POLR2C-203ENST00000562953 CD109Q6YHK3 1445 aa21.8■■□□□ 1.08
POLR2C-203ENST00000562953 KCNH8Q96L42 1107 aa21.8■■□□□ 1.08
POLR2C-203ENST00000562953 RAPGEF2Q9Y4G8 1499 aa21.79■■□□□ 1.08
POLR2C-203ENST00000562953 MAGI3Q5TCQ9 1506 aa21.79■■□□□ 1.08
POLR2C-203ENST00000562953 KIAA0556O60303 1618 aa21.76■■□□□ 1.07
POLR2C-203ENST00000562953 CFAP43Q8NDM7 1665 aa21.72■■□□□ 1.07
POLR2C-203ENST00000562953 GOLGA3Q08378 1498 aa21.67■■□□□ 1.06
POLR2C-203ENST00000562953 FAM9AQ8IZU1 332 aaPredicted RBP21.67■■□□□ 1.06
POLR2C-203ENST00000562953 ARAP3Q8WWN8 1544 aa21.65■■□□□ 1.06
POLR2C-203ENST00000562953 KIF21BO75037 1637 aa21.63■■□□□ 1.05
POLR2C-203ENST00000562953 ABCA8O94911 1581 aa21.62■■□□□ 1.05
POLR2C-203ENST00000562953 PHLDB1Q86UU1 1377 aa21.61■■□□□ 1.05
POLR2C-203ENST00000562953 PTPRMP28827 1452 aa21.59■■□□□ 1.05
POLR2C-203ENST00000562953 CTTNBP2Q8WZ74 1663 aa21.53■■□□□ 1.04
POLR2C-203ENST00000562953 ADAMTSL3P82987 1691 aa21.53■■□□□ 1.04
POLR2C-203ENST00000562953 RAPGEF3O95398 923 aa21.52■■□□□ 1.04
POLR2C-203ENST00000562953 ARID4BQ4LE39 1312 aaPredicted RBP21.52■■□□□ 1.03
POLR2C-203ENST00000562953 ARID3CA6NKF2 412 aa21.51■■□□□ 1.03
POLR2C-203ENST00000562953 ATP10BO94823 1461 aa21.49■■□□□ 1.03
POLR2C-203ENST00000562953 NEO1Q92859 1461 aa21.45■■□□□ 1.03
POLR2C-203ENST00000562953 ABCA9Q8IUA7 1624 aa21.45■■□□□ 1.02
POLR2C-203ENST00000562953 P3H3Q8IVL6 736 aa21.45■■□□□ 1.02
POLR2C-203ENST00000562953 PCF11O94913 1555 aaKnown RBP21.44■■□□□ 1.02
POLR2C-203ENST00000562953 LMTK3Q96Q04 1460 aa21.42■■□□□ 1.02
POLR2C-203ENST00000562953 BCORL1Q5H9F3 1711 aa21.41■■□□□ 1.02
POLR2C-203ENST00000562953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.41■■□□□ 1.02
POLR2C-203ENST00000562953 HNRNPUL2Q1KMD3 747 aaKnown RBP21.41■■□□□ 1.02
POLR2C-203ENST00000562953 PRXQ9BXM0 1461 aa21.4■■□□□ 1.02
POLR2C-203ENST00000562953 MADDQ8WXG6 1647 aa21.38■■□□□ 1.01
POLR2C-203ENST00000562953 HSPA2P54652 639 aa21.35■■□□□ 1.01
POLR2C-203ENST00000562953 CERKQ8TCT0 537 aa21.34■■□□□ 1.01
POLR2C-203ENST00000562953 FRMPD1Q5SYB0 1578 aa21.31■■□□□ 1
POLR2C-203ENST00000562953 POGZQ7Z3K3 1410 aa21.31■■□□□ 1
POLR2C-203ENST00000562953 DENND4BO75064 1496 aaPredicted RBP21.31■■□□□ 1
POLR2C-203ENST00000562953 PLEKHD1A6NEE1 506 aa21.3■■□□□ 1
POLR2C-203ENST00000562953 PLPPR3Q6T4P5 718 aa21.29■■□□□ 1
POLR2C-203ENST00000562953 RIMS1Q86UR5 1692 aaKnown RBP21.28■■□□□ 1
POLR2C-203ENST00000562953 RAPGEF6Q8TEU7 1601 aa21.28■■□□□ 1
POLR2C-203ENST00000562953 FHOD3Q2V2M9 1422 aa21.27■■□□□ 1
POLR2C-203ENST00000562953 AKNAQ7Z591 1439 aa21.26■□□□□ 0.99
POLR2C-203ENST00000562953 ARHGEF40Q8TER5 1519 aa21.25■□□□□ 0.99
POLR2C-203ENST00000562953 FANCAO15360 1455 aa21.25■□□□□ 0.99
POLR2C-203ENST00000562953 SAMD9Q5K651 1589 aa21.22■□□□□ 0.99
POLR2C-203ENST00000562953 NUP153P49790 1475 aaKnown RBP21.21■□□□□ 0.99
POLR2C-203ENST00000562953 RICTORQ6R327 1708 aa21.21■□□□□ 0.99
POLR2C-203ENST00000562953 CSRNP3Q8WYN3 585 aa21.2■□□□□ 0.98
POLR2C-203ENST00000562953 MLECQ14165 292 aa21.19■□□□□ 0.98
POLR2C-203ENST00000562953 MAGI2Q86UL8 1455 aa21.19■□□□□ 0.98
POLR2C-203ENST00000562953 CFAP74Q9C0B2 1584 aa21.18■□□□□ 0.98
POLR2C-203ENST00000562953 DMRT2Q9Y5R5 561 aa21.17■□□□□ 0.98
POLR2C-203ENST00000562953 EFCAB5A4FU69 1503 aa21.16■□□□□ 0.98
POLR2C-203ENST00000562953 ZMYM4Q5VZL5 1548 aa21.16■□□□□ 0.98
POLR2C-203ENST00000562953 ZFYVE16Q7Z3T8 1539 aa21.16■□□□□ 0.98
POLR2C-203ENST00000562953 YEATS2Q9ULM3 1422 aa21.16■□□□□ 0.98
POLR2C-203ENST00000562953 DISP3Q9P2K9 1392 aa21.15■□□□□ 0.98
POLR2C-203ENST00000562953 SOCS7O14512 581 aa21.14■□□□□ 0.97
POLR2C-203ENST00000562953 RANGAP1P46060 587 aaPredicted RBP21.14■□□□□ 0.97
POLR2C-203ENST00000562953 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.12■□□□□ 0.97
POLR2C-203ENST00000562953 ILDR2Q71H61 639 aa21.11■□□□□ 0.97
POLR2C-203ENST00000562953 SCAPERQ9BY12 1400 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms