RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 IGF1RP08069 1367 aa29.08■■■□□ 2.25
CMTM3-205ENST00000562707 RUSC2Q8N2Y8 1516 aa29.06■■■□□ 2.24
CMTM3-205ENST00000562707 KIF27Q86VH2 1401 aa29.06■■■□□ 2.24
CMTM3-205ENST00000562707 FAM69CQ0P6D2 419 aa29.02■■■□□ 2.24
CMTM3-205ENST00000562707 KIAA0586Q9BVV6 1533 aa29.01■■■□□ 2.23
CMTM3-205ENST00000562707 ABCC10Q5T3U5 1492 aa28.94■■■□□ 2.22
CMTM3-205ENST00000562707 CUL7Q14999 1698 aa28.9■■■□□ 2.22
CMTM3-205ENST00000562707 KIF13AQ9H1H9 1805 aa28.9■■■□□ 2.22
CMTM3-205ENST00000562707 MAPKBP1O60336 1514 aa28.89■■■□□ 2.21
CMTM3-205ENST00000562707 CARMIL1Q5VZK9 1371 aa28.88■■■□□ 2.21
CMTM3-205ENST00000562707 ADCY10Q96PN6 1610 aa28.84■■■□□ 2.21
CMTM3-205ENST00000562707 PTPRGP23470 1445 aa28.84■■■□□ 2.21
CMTM3-205ENST00000562707 TTBK1Q5TCY1 1321 aaPredicted RBP28.82■■■□□ 2.2
CMTM3-205ENST00000562707 CARMIL2Q6F5E8 1435 aa28.79■■■□□ 2.2
CMTM3-205ENST00000562707 DIP2BQ9P265 1576 aa28.77■■■□□ 2.2
CMTM3-205ENST00000562707 TNIKQ9UKE5 1360 aa28.75■■■□□ 2.19
CMTM3-205ENST00000562707 ABCC2Q92887 1545 aa28.64■■■□□ 2.17
CMTM3-205ENST00000562707 IQGAP2Q13576 1575 aa28.63■■■□□ 2.17
CMTM3-205ENST00000562707 KDM6BO15054 1643 aa28.61■■■□□ 2.17
CMTM3-205ENST00000562707 PLB1Q6P1J6 1458 aa28.59■■■□□ 2.17
CMTM3-205ENST00000562707 ASXL2Q76L83 1435 aa28.58■■■□□ 2.17
CMTM3-205ENST00000562707 UACAQ9BZF9 1416 aa28.58■■■□□ 2.17
CMTM3-205ENST00000562707 RAPGEF2Q9Y4G8 1499 aa28.57■■■□□ 2.16
CMTM3-205ENST00000562707 UHRF1BP1LA0JNW5 1464 aa28.56■■■□□ 2.16
CMTM3-205ENST00000562707 DISP1Q96F81 1524 aa28.53■■■□□ 2.16
CMTM3-205ENST00000562707 TSPOAP1O95153 1857 aa28.51■■■□□ 2.15
CMTM3-205ENST00000562707 KDM4FA0A1W2PPD8 638 aa28.5■■■□□ 2.15
CMTM3-205ENST00000562707 UGGT2Q9NYU1 1516 aa28.48■■■□□ 2.15
CMTM3-205ENST00000562707 GLI2P10070 1586 aa28.45■■■□□ 2.15
CMTM3-205ENST00000562707 KDM5BQ9UGL1 1544 aa28.42■■■□□ 2.14
CMTM3-205ENST00000562707 EPRSP07814 1512 aaKnown RBP28.38■■■□□ 2.13
CMTM3-205ENST00000562707 KIAA0556O60303 1618 aa28.36■■■□□ 2.13
CMTM3-205ENST00000562707 TEX14Q8IWB6 1497 aa28.3■■■□□ 2.12
CMTM3-205ENST00000562707 PPRC1Q5VV67 1664 aaKnown RBP28.29■■■□□ 2.12
CMTM3-205ENST00000562707 GOLGA3Q08378 1498 aa28.29■■■□□ 2.12
CMTM3-205ENST00000562707 ZCCHC11Q5TAX3 1644 aaKnown RBP28.29■■■□□ 2.12
CMTM3-205ENST00000562707 COL17A1Q9UMD9 1497 aaPredicted RBP28.26■■■□□ 2.11
CMTM3-205ENST00000562707 WDR7Q9Y4E6 1490 aa28.25■■■□□ 2.11
CMTM3-205ENST00000562707 MAP3K4Q9Y6R4 1608 aa28.24■■■□□ 2.11
CMTM3-205ENST00000562707 FAM9AQ8IZU1 332 aaPredicted RBP28.23■■■□□ 2.11
CMTM3-205ENST00000562707 KCNH8Q96L42 1107 aa28.21■■■□□ 2.11
CMTM3-205ENST00000562707 PRXQ9BXM0 1461 aa28.21■■■□□ 2.11
CMTM3-205ENST00000562707 ADGRL1O94910 1474 aa28.17■■■□□ 2.1
CMTM3-205ENST00000562707 CTTNBP2Q8WZ74 1663 aa28.16■■■□□ 2.1
CMTM3-205ENST00000562707 CD109Q6YHK3 1445 aa28.16■■■□□ 2.1
CMTM3-205ENST00000562707 ABCA8O94911 1581 aa28.13■■■□□ 2.09
CMTM3-205ENST00000562707 MAGI3Q5TCQ9 1506 aa28.09■■■□□ 2.09
CMTM3-205ENST00000562707 P3H3Q8IVL6 736 aa28.09■■■□□ 2.09
CMTM3-205ENST00000562707 ARID3CA6NKF2 412 aa28.05■■■□□ 2.08
CMTM3-205ENST00000562707 CSRNP3Q8WYN3 585 aa28.05■■■□□ 2.08
CMTM3-205ENST00000562707 CFAP43Q8NDM7 1665 aa28■■■□□ 2.07
CMTM3-205ENST00000562707 ATP10BO94823 1461 aa27.97■■■□□ 2.07
CMTM3-205ENST00000562707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.92■■■□□ 2.06
CMTM3-205ENST00000562707 HNRNPUL2Q1KMD3 747 aaKnown RBP27.92■■■□□ 2.06
CMTM3-205ENST00000562707 PHLDB1Q86UU1 1377 aa27.88■■■□□ 2.05
CMTM3-205ENST00000562707 ARAP3Q8WWN8 1544 aa27.87■■■□□ 2.05
CMTM3-205ENST00000562707 RANGAP1P46060 587 aaPredicted RBP27.86■■■□□ 2.05
CMTM3-205ENST00000562707 ILDR1Q86SU0 546 aaPredicted RBP27.85■■■□□ 2.05
CMTM3-205ENST00000562707 EEA1Q15075 1411 aa27.84■■■□□ 2.05
CMTM3-205ENST00000562707 SAMD9Q5K651 1589 aa27.82■■■□□ 2.04
CMTM3-205ENST00000562707 HECW2Q9P2P5 1572 aa27.8■■■□□ 2.04
CMTM3-205ENST00000562707 RAPGEF6Q8TEU7 1601 aa27.78■■■□□ 2.04
CMTM3-205ENST00000562707 ABCA9Q8IUA7 1624 aa27.78■■■□□ 2.04
CMTM3-205ENST00000562707 RAPGEF3O95398 923 aa27.77■■■□□ 2.04
CMTM3-205ENST00000562707 PLEKHD1A6NEE1 506 aa27.75■■■□□ 2.03
CMTM3-205ENST00000562707 NEO1Q92859 1461 aa27.74■■■□□ 2.03
CMTM3-205ENST00000562707 FHOD3Q2V2M9 1422 aa27.73■■■□□ 2.03
CMTM3-205ENST00000562707 NUP153P49790 1475 aaKnown RBP27.72■■■□□ 2.03
CMTM3-205ENST00000562707 KIF21BO75037 1637 aa27.71■■■□□ 2.03
CMTM3-205ENST00000562707 ARID4BQ4LE39 1312 aaPredicted RBP27.66■■■□□ 2.02
CMTM3-205ENST00000562707 PTPRMP28827 1452 aa27.58■■■□□ 2.01
CMTM3-205ENST00000562707 DENND4BO75064 1496 aaPredicted RBP27.57■■■□□ 2
CMTM3-205ENST00000562707 EFCAB5A4FU69 1503 aa27.57■■■□□ 2
CMTM3-205ENST00000562707 AKNAQ7Z591 1439 aa27.56■■■□□ 2
CMTM3-205ENST00000562707 FANCAO15360 1455 aa27.53■■■□□ 2
CMTM3-205ENST00000562707 UBTFP17480 764 aaKnown RBP27.53■■■□□ 2
CMTM3-205ENST00000562707 ADAMTSL3P82987 1691 aa27.52■■■□□ 2
CMTM3-205ENST00000562707 FRMPD1Q5SYB0 1578 aa27.52■■■□□ 2
CMTM3-205ENST00000562707 EHMT2Q96KQ7 1210 aa27.5■■□□□ 1.99
CMTM3-205ENST00000562707 ATP1B4Q9UN42 357 aaPredicted RBP27.5■■□□□ 1.99
CMTM3-205ENST00000562707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.49■■□□□ 1.993e-7■■■■■ 59
CMTM3-205ENST00000562707 CFAP74Q9C0B2 1584 aa27.44■■□□□ 1.98
CMTM3-205ENST00000562707 BCORL1Q5H9F3 1711 aa27.44■■□□□ 1.98
CMTM3-205ENST00000562707 CDK13Q14004 1512 aaKnown RBP27.42■■□□□ 1.98
CMTM3-205ENST00000562707 ARHGEF40Q8TER5 1519 aa27.42■■□□□ 1.98
CMTM3-205ENST00000562707 CDK11AQ9UQ88 783 aaPredicted RBP27.42■■□□□ 1.98
CMTM3-205ENST00000562707 POGZQ7Z3K3 1410 aa27.41■■□□□ 1.98
CMTM3-205ENST00000562707 FMN1Q68DA7 1419 aa27.41■■□□□ 1.98
CMTM3-205ENST00000562707 MADDQ8WXG6 1647 aa27.4■■□□□ 1.98
CMTM3-205ENST00000562707 PLCH2O75038 1416 aa27.4■■□□□ 1.98
CMTM3-205ENST00000562707 TTC37Q6PGP7 1564 aa27.39■■□□□ 1.98
CMTM3-205ENST00000562707 SCAPERQ9BY12 1400 aa27.38■■□□□ 1.97
CMTM3-205ENST00000562707 RICTORQ6R327 1708 aa27.38■■□□□ 1.97
CMTM3-205ENST00000562707 EFCAB2Q5VUJ9 269 aa27.37■■□□□ 1.97
CMTM3-205ENST00000562707 MAGI2Q86UL8 1455 aa27.37■■□□□ 1.97
CMTM3-205ENST00000562707 FBXO41Q8TF61 875 aa27.36■■□□□ 1.97
CMTM3-205ENST00000562707 YEATS2Q9ULM3 1422 aa27.35■■□□□ 1.97
CMTM3-205ENST00000562707 PLPPR3Q6T4P5 718 aa27.35■■□□□ 1.97
CMTM3-205ENST00000562707 ZMYM4Q5VZL5 1548 aa27.35■■□□□ 1.97
CMTM3-205ENST00000562707 ZFYVE16Q7Z3T8 1539 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms