RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 EIF4G3O43432 1585 aaKnown RBP25.75■■□□□ 1.71
PKD1-225ENST00000562297 FHAD1B1AJZ9 1412 aa25.73■■□□□ 1.71
PKD1-225ENST00000562297 EFCAB5A4FU69 1503 aa25.68■■□□□ 1.7
PKD1-225ENST00000562297 TTBK1Q5TCY1 1321 aaPredicted RBP25.65■■□□□ 1.7
PKD1-225ENST00000562297 SNAPC4Q5SXM2 1469 aa25.61■■□□□ 1.69
PKD1-225ENST00000562297 SAMD9Q5K651 1589 aa25.6■■□□□ 1.69
PKD1-225ENST00000562297 APLP2Q06481 763 aa25.59■■□□□ 1.69
PKD1-225ENST00000562297 HRCP23327 699 aa25.59■■□□□ 1.69
PKD1-225ENST00000562297 FHOD3Q2V2M9 1422 aa25.55■■□□□ 1.68
PKD1-225ENST00000562297 MAGI1Q96QZ7 1491 aaPredicted RBP25.55■■□□□ 1.68
PKD1-225ENST00000562297 PCF11O94913 1555 aaKnown RBP25.51■■□□□ 1.67
PKD1-225ENST00000562297 IQGAP2Q13576 1575 aa25.51■■□□□ 1.67
PKD1-225ENST00000562297 P3H3Q8IVL6 736 aa25.5■■□□□ 1.67
PKD1-225ENST00000562297 GRIN2AQ12879 1464 aa25.5■■□□□ 1.67
PKD1-225ENST00000562297 MAP3K1Q13233 1512 aa25.49■■□□□ 1.67
PKD1-225ENST00000562297 KANK4Q5T7N3 995 aaPredicted RBP25.47■■□□□ 1.67
PKD1-225ENST00000562297 TIAM1Q13009 1591 aa25.46■■□□□ 1.67
PKD1-225ENST00000562297 SYNJ2O15056 1496 aa25.45■■□□□ 1.67
PKD1-225ENST00000562297 FYCO1Q9BQS8 1478 aa25.43■■□□□ 1.66
PKD1-225ENST00000562297 CFAP43Q8NDM7 1665 aa25.43■■□□□ 1.66
PKD1-225ENST00000562297 CASKIN1Q8WXD9 1431 aa25.42■■□□□ 1.66
PKD1-225ENST00000562297 FMN1Q68DA7 1419 aa25.41■■□□□ 1.66
PKD1-225ENST00000562297 KIAA0586Q9BVV6 1533 aa25.4■■□□□ 1.66
PKD1-225ENST00000562297 UGGT2Q9NYU1 1516 aa25.4■■□□□ 1.66
PKD1-225ENST00000562297 CEP170Q5SW79 1584 aa25.37■■□□□ 1.65
PKD1-225ENST00000562297 LRRC9Q6ZRR7 1453 aa25.33■■□□□ 1.65
PKD1-225ENST00000562297 CHMP7Q8WUX9 453 aaPredicted RBP25.32■■□□□ 1.64
PKD1-225ENST00000562297 LRRIQ1Q96JM4 1722 aa25.32■■□□□ 1.64
PKD1-225ENST00000562297 NUP160Q12769 1436 aa25.31■■□□□ 1.64
PKD1-225ENST00000562297 DISP1Q96F81 1524 aa25.28■■□□□ 1.64
PKD1-225ENST00000562297 KIAA0556O60303 1618 aa25.26■■□□□ 1.63
PKD1-225ENST00000562297 RRBP1Q9P2E9 1410 aaKnown RBP25.26■■□□□ 1.63
PKD1-225ENST00000562297 FBLN2P98095 1184 aa25.22■■□□□ 1.63
PKD1-225ENST00000562297 ATP1B4Q9UN42 357 aaPredicted RBP25.21■■□□□ 1.63
PKD1-225ENST00000562297 CHD1O14646 1710 aa25.18■■□□□ 1.62
PKD1-225ENST00000562297 HECW1Q76N89 1606 aa25.16■■□□□ 1.62
PKD1-225ENST00000562297 PHLDB1Q86UU1 1377 aa25.12■■□□□ 1.61
PKD1-225ENST00000562297 CCNB3Q8WWL7 1395 aa25.12■■□□□ 1.61
PKD1-225ENST00000562297 HNRNPUL2Q1KMD3 747 aaKnown RBP25.12■■□□□ 1.61
PKD1-225ENST00000562297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.12■■□□□ 1.61
PKD1-225ENST00000562297 CCDC18Q5T9S5 1454 aa25.11■■□□□ 1.61
PKD1-225ENST00000562297 ZEB1P37275 1124 aaPredicted RBP25.1■■□□□ 1.61
PKD1-225ENST00000562297 JPH4Q96JJ6 628 aa25.08■■□□□ 1.61
PKD1-225ENST00000562297 EPRSP07814 1512 aaKnown RBP25.07■■□□□ 1.6
PKD1-225ENST00000562297 MAGI3Q5TCQ9 1506 aa25.05■■□□□ 1.6
PKD1-225ENST00000562297 EHBP1L1Q8N3D4 1523 aa25.04■■□□□ 1.6
PKD1-225ENST00000562297 RAPGEF6Q8TEU7 1601 aa25.04■■□□□ 1.6
PKD1-225ENST00000562297 MTUS2Q5JR59 1369 aa25.04■■□□□ 1.6
PKD1-225ENST00000562297 CARMIL2Q6F5E8 1435 aa25.02■■□□□ 1.6
PKD1-225ENST00000562297 CDK13Q14004 1512 aaKnown RBP25.01■■□□□ 1.59
PKD1-225ENST00000562297 CCER1Q8TC90 406 aaPredicted RBP25■■□□□ 1.59
PKD1-225ENST00000562297 SUPT6HQ7KZ85 1726 aaKnown RBP25■■□□□ 1.59
PKD1-225ENST00000562297 NUP153P49790 1475 aaKnown RBP25■■□□□ 1.59
PKD1-225ENST00000562297 ARHGEF11O15085 1522 aa24.97■■□□□ 1.59
PKD1-225ENST00000562297 SHROOM2Q13796 1616 aa24.97■■□□□ 1.59
PKD1-225ENST00000562297 NCOA2Q15596 1464 aa24.97■■□□□ 1.59
PKD1-225ENST00000562297 PLB1Q6P1J6 1458 aa24.93■■□□□ 1.58
PKD1-225ENST00000562297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.91■■□□□ 1.58
PKD1-225ENST00000562297 FGD6Q6ZV73 1430 aa24.91■■□□□ 1.58
PKD1-225ENST00000562297 PRG4Q92954 1404 aaPredicted RBP24.91■■□□□ 1.58
PKD1-225ENST00000562297 ABCA8O94911 1581 aa24.89■■□□□ 1.57
PKD1-225ENST00000562297 MYOM3Q5VTT5 1437 aa24.88■■□□□ 1.57
PKD1-225ENST00000562297 CLASP1Q7Z460 1538 aa24.86■■□□□ 1.57
PKD1-225ENST00000562297 ARID3CA6NKF2 412 aa24.85■■□□□ 1.57
PKD1-225ENST00000562297 FAM50AQ14320 339 aaKnown RBP24.83■■□□□ 1.56
PKD1-225ENST00000562297 ITGAEP38570 1179 aa24.81■■□□□ 1.56
PKD1-225ENST00000562297 ERCC6L2Q5T890 1561 aa24.78■■□□□ 1.56
PKD1-225ENST00000562297 PTPN23Q9H3S7 1636 aa24.78■■□□□ 1.56
PKD1-225ENST00000562297 PTPRGP23470 1445 aa24.77■■□□□ 1.56
PKD1-225ENST00000562297 TROQ12816 1431 aaPredicted RBP24.74■■□□□ 1.55
PKD1-225ENST00000562297 TCOF1Q13428 1488 aaKnown RBP24.74■■□□□ 1.55
PKD1-225ENST00000562297 ADCY10Q96PN6 1610 aa24.73■■□□□ 1.55
PKD1-225ENST00000562297 CDK11AQ9UQ88 783 aaPredicted RBP24.73■■□□□ 1.55
PKD1-225ENST00000562297 ATP10BO94823 1461 aa24.71■■□□□ 1.55
PKD1-225ENST00000562297 DHX57Q6P158 1386 aaKnown RBP24.71■■□□□ 1.55
PKD1-225ENST00000562297 MIA2Q96PC5 1412 aa24.7■■□□□ 1.55
PKD1-225ENST00000562297 RAB3GAP2Q9H2M9 1393 aa24.69■■□□□ 1.54
PKD1-225ENST00000562297 SETD5Q9C0A6 1442 aa24.69■■□□□ 1.54
PKD1-225ENST00000562297 PTPRKQ15262 1439 aa24.68■■□□□ 1.54
PKD1-225ENST00000562297 KIF14Q15058 1648 aa24.67■■□□□ 1.54
PKD1-225ENST00000562297 UACAQ9BZF9 1416 aa24.65■■□□□ 1.54
PKD1-225ENST00000562297 CLSPNQ9HAW4 1339 aa24.61■■□□□ 1.53
PKD1-225ENST00000562297 ITSN2Q9NZM3 1697 aa24.6■■□□□ 1.53
PKD1-225ENST00000562297 ABCC2Q92887 1545 aa24.59■■□□□ 1.53
PKD1-225ENST00000562297 HFM1A2PYH4 1435 aa24.57■■□□□ 1.52
PKD1-225ENST00000562297 GPATCH8Q9UKJ3 1502 aaKnown RBP24.56■■□□□ 1.52
PKD1-225ENST00000562297 PLEKHD1A6NEE1 506 aa24.56■■□□□ 1.52
PKD1-225ENST00000562297 ABCC10Q5T3U5 1492 aa24.55■■□□□ 1.52
PKD1-225ENST00000562297 CDC42BPAQ5VT25 1732 aa24.54■■□□□ 1.52
PKD1-225ENST00000562297 NAIPQ13075 1403 aa24.52■■□□□ 1.52
PKD1-225ENST00000562297 DNMT1P26358 1616 aaKnown RBP24.51■■□□□ 1.51
PKD1-225ENST00000562297 UHRF1BP1LA0JNW5 1464 aa24.51■■□□□ 1.51
PKD1-225ENST00000562297 MAPKBP1O60336 1514 aa24.49■■□□□ 1.51
PKD1-225ENST00000562297 GCC2Q8IWJ2 1684 aa24.49■■□□□ 1.51
PKD1-225ENST00000562297 AKNAQ7Z591 1439 aa24.48■■□□□ 1.51
PKD1-225ENST00000562297 ZNF644Q9H582 1327 aaPredicted RBP24.48■■□□□ 1.51
PKD1-225ENST00000562297 CAMSAP2Q08AD1 1489 aa24.47■■□□□ 1.51
PKD1-225ENST00000562297 DAPK1P53355 1430 aa24.46■■□□□ 1.51
PKD1-225ENST00000562297 ZCCHC11Q5TAX3 1644 aaKnown RBP24.45■■□□□ 1.5
PKD1-225ENST00000562297 ABCC5O15440 1437 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms