RNA–Protein interactions for RNA: ENST00000561886.1

SMIM1-203, Transcript of small integral membrane protein 1 (Vel blood group), humanhuman

TSL 2 BASIC

Gene SMIM1, Length 491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1-203ENST00000561886 RUSC2Q8N2Y8 1516 aa34.37■■■■□ 3.09
SMIM1-203ENST00000561886 NPM1P06748 294 aaKnown RBP eCLIP34.32■■■■□ 3.08
SMIM1-203ENST00000561886 FAM69CQ0P6D2 419 aa34.32■■■■□ 3.08
SMIM1-203ENST00000561886 ABCC10Q5T3U5 1492 aa34.24■■■■□ 3.07
SMIM1-203ENST00000561886 ADCY10Q96PN6 1610 aa34.19■■■■□ 3.06
SMIM1-203ENST00000561886 IGF1RP08069 1367 aa34.18■■■■□ 3.06
SMIM1-203ENST00000561886 MAPKBP1O60336 1514 aa34.17■■■■□ 3.06
SMIM1-203ENST00000561886 KIAA0586Q9BVV6 1533 aa34.16■■■■□ 3.06
SMIM1-203ENST00000561886 DIP2BQ9P265 1576 aa34.13■■■■□ 3.05
SMIM1-203ENST00000561886 KIF27Q86VH2 1401 aa34.13■■■■□ 3.05
SMIM1-203ENST00000561886 TTBK1Q5TCY1 1321 aaPredicted RBP34.09■■■■□ 3.05
SMIM1-203ENST00000561886 CUL7Q14999 1698 aa34.06■■■■□ 3.04
SMIM1-203ENST00000561886 PTPRGP23470 1445 aa33.98■■■■□ 3.03
SMIM1-203ENST00000561886 TSPOAP1O95153 1857 aa33.97■■■■□ 3.03
SMIM1-203ENST00000561886 KDM6BO15054 1643 aa33.97■■■■□ 3.03
SMIM1-203ENST00000561886 CARMIL1Q5VZK9 1371 aa33.96■■■■□ 3.03
SMIM1-203ENST00000561886 CARMIL2Q6F5E8 1435 aa33.87■■■■□ 3.01
SMIM1-203ENST00000561886 TNIKQ9UKE5 1360 aa33.86■■■■□ 3.01
SMIM1-203ENST00000561886 KDM4FA0A1W2PPD8 638 aa33.86■■■■□ 3.01
SMIM1-203ENST00000561886 ABCC2Q92887 1545 aa33.81■■■■□ 3
SMIM1-203ENST00000561886 IQGAP2Q13576 1575 aa33.78■■■■□ 3
SMIM1-203ENST00000561886 ASXL2Q76L83 1435 aa33.78■■■■□ 3
SMIM1-203ENST00000561886 PLB1Q6P1J6 1458 aa33.71■■■□□ 2.99
SMIM1-203ENST00000561886 UACAQ9BZF9 1416 aa33.68■■■□□ 2.98
SMIM1-203ENST00000561886 DISP1Q96F81 1524 aa33.67■■■□□ 2.98
SMIM1-203ENST00000561886 UHRF1BP1LA0JNW5 1464 aa33.66■■■□□ 2.98
SMIM1-203ENST00000561886 GLI2P10070 1586 aa33.64■■■□□ 2.98
SMIM1-203ENST00000561886 PPRC1Q5VV67 1664 aaKnown RBP33.63■■■□□ 2.97
SMIM1-203ENST00000561886 RAPGEF2Q9Y4G8 1499 aa33.57■■■□□ 2.97
SMIM1-203ENST00000561886 EPRSP07814 1512 aaKnown RBP33.53■■■□□ 2.96
SMIM1-203ENST00000561886 UGGT2Q9NYU1 1516 aa33.53■■■□□ 2.96
SMIM1-203ENST00000561886 KDM5BQ9UGL1 1544 aa33.53■■■□□ 2.96
SMIM1-203ENST00000561886 COL17A1Q9UMD9 1497 aaPredicted RBP33.5■■■□□ 2.95
SMIM1-203ENST00000561886 ZCCHC11Q5TAX3 1644 aaKnown RBP33.49■■■□□ 2.95
SMIM1-203ENST00000561886 KIAA0556O60303 1618 aa33.48■■■□□ 2.95
SMIM1-203ENST00000561886 ADGRL1O94910 1474 aa33.47■■■□□ 2.95
SMIM1-203ENST00000561886 MAP3K4Q9Y6R4 1608 aa33.46■■■□□ 2.95
SMIM1-203ENST00000561886 TEX14Q8IWB6 1497 aa33.41■■■□□ 2.94
SMIM1-203ENST00000561886 WDR7Q9Y4E6 1490 aa33.35■■■□□ 2.93
SMIM1-203ENST00000561886 KCNH8Q96L42 1107 aa33.3■■■□□ 2.92
SMIM1-203ENST00000561886 CTTNBP2Q8WZ74 1663 aa33.28■■■□□ 2.92
SMIM1-203ENST00000561886 ILDR1Q86SU0 546 aaPredicted RBP33.26■■■□□ 2.91
SMIM1-203ENST00000561886 GOLGA3Q08378 1498 aa33.24■■■□□ 2.91
SMIM1-203ENST00000561886 CD109Q6YHK3 1445 aa33.22■■■□□ 2.91
SMIM1-203ENST00000561886 ABCA8O94911 1581 aa33.2■■■□□ 2.91
SMIM1-203ENST00000561886 ARID3CA6NKF2 412 aa33.15■■■□□ 2.9
SMIM1-203ENST00000561886 MAGI3Q5TCQ9 1506 aa33.14■■■□□ 2.9
SMIM1-203ENST00000561886 CFAP43Q8NDM7 1665 aa33.13■■■□□ 2.89
SMIM1-203ENST00000561886 HECW2Q9P2P5 1572 aa33.13■■■□□ 2.89
SMIM1-203ENST00000561886 PRXQ9BXM0 1461 aa33.11■■■□□ 2.89
SMIM1-203ENST00000561886 P3H3Q8IVL6 736 aa33.1■■■□□ 2.89
SMIM1-203ENST00000561886 FAM9AQ8IZU1 332 aaPredicted RBP33■■■□□ 2.87
SMIM1-203ENST00000561886 KIF21BO75037 1637 aa32.96■■■□□ 2.87
SMIM1-203ENST00000561886 ATP10BO94823 1461 aa32.96■■■□□ 2.87
SMIM1-203ENST00000561886 ARAP3Q8WWN8 1544 aa32.9■■■□□ 2.86
SMIM1-203ENST00000561886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.86■■■□□ 2.85
SMIM1-203ENST00000561886 HNRNPUL2Q1KMD3 747 aaKnown RBP32.86■■■□□ 2.85
SMIM1-203ENST00000561886 RAPGEF3O95398 923 aa32.83■■■□□ 2.85
SMIM1-203ENST00000561886 RANGAP1P46060 587 aaPredicted RBP32.82■■■□□ 2.84
SMIM1-203ENST00000561886 CSRNP3Q8WYN3 585 aa32.82■■■□□ 2.84
SMIM1-203ENST00000561886 ABCA9Q8IUA7 1624 aa32.81■■■□□ 2.84
SMIM1-203ENST00000561886 SAMD9Q5K651 1589 aa32.79■■■□□ 2.84
SMIM1-203ENST00000561886 RAPGEF6Q8TEU7 1601 aa32.77■■■□□ 2.84
SMIM1-203ENST00000561886 PHLDB1Q86UU1 1377 aa32.76■■■□□ 2.83
SMIM1-203ENST00000561886 NEO1Q92859 1461 aa32.7■■■□□ 2.83
SMIM1-203ENST00000561886 PTPRMP28827 1452 aa32.68■■■□□ 2.82
SMIM1-203ENST00000561886 ARID4BQ4LE39 1312 aaPredicted RBP32.68■■■□□ 2.82
SMIM1-203ENST00000561886 NUP153P49790 1475 aaKnown RBP32.67■■■□□ 2.82
SMIM1-203ENST00000561886 ADAMTSL3P82987 1691 aa32.66■■■□□ 2.82
SMIM1-203ENST00000561886 FHOD3Q2V2M9 1422 aa32.66■■■□□ 2.82
SMIM1-203ENST00000561886 FRMPD1Q5SYB0 1578 aa32.63■■■□□ 2.81
SMIM1-203ENST00000561886 PLEKHD1A6NEE1 506 aa32.58■■■□□ 2.81
SMIM1-203ENST00000561886 BCORL1Q5H9F3 1711 aa32.56■■■□□ 2.8
SMIM1-203ENST00000561886 MADDQ8WXG6 1647 aa32.55■■■□□ 2.8
SMIM1-203ENST00000561886 DENND4BO75064 1496 aaPredicted RBP32.51■■■□□ 2.79
SMIM1-203ENST00000561886 EEA1Q15075 1411 aa32.51■■■□□ 2.79
SMIM1-203ENST00000561886 FBXO41Q8TF61 875 aa32.5■■■□□ 2.79
SMIM1-203ENST00000561886 AKNAQ7Z591 1439 aa32.5■■■□□ 2.79
SMIM1-203ENST00000561886 ARHGEF40Q8TER5 1519 aa32.47■■■□□ 2.79
SMIM1-203ENST00000561886 PLPPR3Q6T4P5 718 aa32.47■■■□□ 2.79
SMIM1-203ENST00000561886 FANCAO15360 1455 aa32.47■■■□□ 2.79
SMIM1-203ENST00000561886 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.45■■■□□ 2.78
SMIM1-203ENST00000561886 RICTORQ6R327 1708 aa32.44■■■□□ 2.78
SMIM1-203ENST00000561886 PCF11O94913 1555 aaKnown RBP32.43■■■□□ 2.78
SMIM1-203ENST00000561886 RIMS1Q86UR5 1692 aaKnown RBP32.43■■■□□ 2.78
SMIM1-203ENST00000561886 TTC37Q6PGP7 1564 aa32.41■■■□□ 2.78
SMIM1-203ENST00000561886 LMTK3Q96Q04 1460 aa32.41■■■□□ 2.78
SMIM1-203ENST00000561886 CFAP74Q9C0B2 1584 aa32.39■■■□□ 2.78
SMIM1-203ENST00000561886 EHMT2Q96KQ7 1210 aa32.38■■■□□ 2.77
SMIM1-203ENST00000561886 EFCAB5A4FU69 1503 aa32.37■■■□□ 2.77
SMIM1-203ENST00000561886 CDK13Q14004 1512 aaKnown RBP32.37■■■□□ 2.77
SMIM1-203ENST00000561886 YEATS2Q9ULM3 1422 aa32.35■■■□□ 2.77
SMIM1-203ENST00000561886 HSPA2P54652 639 aa32.34■■■□□ 2.77
SMIM1-203ENST00000561886 MLECQ14165 292 aa32.33■■■□□ 2.77
SMIM1-203ENST00000561886 ATP1B4Q9UN42 357 aaPredicted RBP32.33■■■□□ 2.77
SMIM1-203ENST00000561886 ZFYVE16Q7Z3T8 1539 aa32.32■■■□□ 2.76
SMIM1-203ENST00000561886 POGZQ7Z3K3 1410 aa32.32■■■□□ 2.76
SMIM1-203ENST00000561886 ZMYM4Q5VZL5 1548 aa32.31■■■□□ 2.76
SMIM1-203ENST00000561886 SIGLEC1Q9BZZ2 1709 aa32.29■■■□□ 2.76
SMIM1-203ENST00000561886 SCAPERQ9BY12 1400 aa32.26■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms