RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 ERICH3Q5RHP9 1530 aa32.9■■■□□ 2.86
COMMD4-204ENST00000561662 ABCC10Q5T3U5 1492 aa32.8■■■□□ 2.84
COMMD4-204ENST00000561662 NPM1P06748 294 aaKnown RBP eCLIP32.79■■■□□ 2.84
COMMD4-204ENST00000561662 RUSC2Q8N2Y8 1516 aa32.74■■■□□ 2.83
COMMD4-204ENST00000561662 DIP2BQ9P265 1576 aa32.7■■■□□ 2.82
COMMD4-204ENST00000561662 ADCY10Q96PN6 1610 aa32.69■■■□□ 2.82
COMMD4-204ENST00000561662 MAPKBP1O60336 1514 aa32.67■■■□□ 2.82
COMMD4-204ENST00000561662 KDM4FA0A1W2PPD8 638 aa32.67■■■□□ 2.82
COMMD4-204ENST00000561662 KDM6BO15054 1643 aa32.61■■■□□ 2.81
COMMD4-204ENST00000561662 TSPOAP1O95153 1857 aa32.6■■■□□ 2.81
COMMD4-204ENST00000561662 TTBK1Q5TCY1 1321 aaPredicted RBP32.55■■■□□ 2.8
COMMD4-204ENST00000561662 KIAA0586Q9BVV6 1533 aa32.48■■■□□ 2.79
COMMD4-204ENST00000561662 IGF1RP08069 1367 aa32.42■■■□□ 2.78
COMMD4-204ENST00000561662 ILDR1Q86SU0 546 aaPredicted RBP32.4■■■□□ 2.78
COMMD4-204ENST00000561662 PTPRGP23470 1445 aa32.38■■■□□ 2.77
COMMD4-204ENST00000561662 KIF27Q86VH2 1401 aa32.3■■■□□ 2.76
COMMD4-204ENST00000561662 CUL7Q14999 1698 aa32.29■■■□□ 2.76
COMMD4-204ENST00000561662 ASXL2Q76L83 1435 aa32.26■■■□□ 2.76
COMMD4-204ENST00000561662 ABCC2Q92887 1545 aa32.26■■■□□ 2.75
COMMD4-204ENST00000561662 TNIKQ9UKE5 1360 aa32.23■■■□□ 2.75
COMMD4-204ENST00000561662 PPRC1Q5VV67 1664 aaKnown RBP32.21■■■□□ 2.75
COMMD4-204ENST00000561662 ADGRL1O94910 1474 aa32.21■■■□□ 2.75
COMMD4-204ENST00000561662 CARMIL1Q5VZK9 1371 aa32.19■■■□□ 2.74
COMMD4-204ENST00000561662 CARMIL2Q6F5E8 1435 aa32.19■■■□□ 2.74
COMMD4-204ENST00000561662 PLB1Q6P1J6 1458 aa32.16■■■□□ 2.74
COMMD4-204ENST00000561662 GLI2P10070 1586 aa32.13■■■□□ 2.73
COMMD4-204ENST00000561662 COL17A1Q9UMD9 1497 aaPredicted RBP32.13■■■□□ 2.73
COMMD4-204ENST00000561662 IQGAP2Q13576 1575 aa32.09■■■□□ 2.73
COMMD4-204ENST00000561662 UACAQ9BZF9 1416 aa32.08■■■□□ 2.73
COMMD4-204ENST00000561662 UHRF1BP1LA0JNW5 1464 aa32.06■■■□□ 2.72
COMMD4-204ENST00000561662 EPRSP07814 1512 aaKnown RBP32.03■■■□□ 2.72
COMMD4-204ENST00000561662 DISP1Q96F81 1524 aa32.03■■■□□ 2.72
COMMD4-204ENST00000561662 HECW2Q9P2P5 1572 aa31.98■■■□□ 2.71
COMMD4-204ENST00000561662 MAP3K4Q9Y6R4 1608 aa31.97■■■□□ 2.71
COMMD4-204ENST00000561662 KDM5BQ9UGL1 1544 aa31.95■■■□□ 2.71
COMMD4-204ENST00000561662 ZCCHC11Q5TAX3 1644 aaKnown RBP31.93■■■□□ 2.7
COMMD4-204ENST00000561662 TEX14Q8IWB6 1497 aa31.91■■■□□ 2.7
COMMD4-204ENST00000561662 UGGT2Q9NYU1 1516 aa31.83■■■□□ 2.69
COMMD4-204ENST00000561662 KIAA0556O60303 1618 aa31.82■■■□□ 2.68
COMMD4-204ENST00000561662 WDR7Q9Y4E6 1490 aa31.8■■■□□ 2.68
COMMD4-204ENST00000561662 RAPGEF2Q9Y4G8 1499 aa31.79■■■□□ 2.68
COMMD4-204ENST00000561662 KCNH8Q96L42 1107 aa31.77■■■□□ 2.68
COMMD4-204ENST00000561662 CD109Q6YHK3 1445 aa31.71■■■□□ 2.67
COMMD4-204ENST00000561662 MAGI3Q5TCQ9 1506 aa31.63■■■□□ 2.65
COMMD4-204ENST00000561662 KIF21BO75037 1637 aa31.6■■■□□ 2.65
COMMD4-204ENST00000561662 ARID3CA6NKF2 412 aa31.6■■■□□ 2.65
COMMD4-204ENST00000561662 CFAP43Q8NDM7 1665 aa31.6■■■□□ 2.65
COMMD4-204ENST00000561662 ABCA8O94911 1581 aa31.56■■■□□ 2.64
COMMD4-204ENST00000561662 CTTNBP2Q8WZ74 1663 aa31.53■■■□□ 2.64
COMMD4-204ENST00000561662 GOLGA3Q08378 1498 aa31.5■■■□□ 2.63
COMMD4-204ENST00000561662 FBXO41Q8TF61 875 aa31.46■■■□□ 2.63
COMMD4-204ENST00000561662 P3H3Q8IVL6 736 aa31.43■■■□□ 2.62
COMMD4-204ENST00000561662 ARAP3Q8WWN8 1544 aa31.4■■■□□ 2.62
COMMD4-204ENST00000561662 RAPGEF3O95398 923 aa31.38■■■□□ 2.61
COMMD4-204ENST00000561662 PTPRMP28827 1452 aa31.37■■■□□ 2.61
COMMD4-204ENST00000561662 ATP10BO94823 1461 aa31.33■■■□□ 2.61
COMMD4-204ENST00000561662 ADAMTSL3P82987 1691 aa31.31■■■□□ 2.6
COMMD4-204ENST00000561662 ARID4BQ4LE39 1312 aaPredicted RBP31.28■■■□□ 2.6
COMMD4-204ENST00000561662 PRXQ9BXM0 1461 aa31.27■■■□□ 2.6
COMMD4-204ENST00000561662 ABCA9Q8IUA7 1624 aa31.25■■■□□ 2.59
COMMD4-204ENST00000561662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.23■■■□□ 2.59
COMMD4-204ENST00000561662 HNRNPUL2Q1KMD3 747 aaKnown RBP31.23■■■□□ 2.59
COMMD4-204ENST00000561662 FAM9AQ8IZU1 332 aaPredicted RBP31.23■■■□□ 2.59
COMMD4-204ENST00000561662 MADDQ8WXG6 1647 aa31.2■■■□□ 2.59
COMMD4-204ENST00000561662 PHLDB1Q86UU1 1377 aa31.19■■■□□ 2.58
COMMD4-204ENST00000561662 BCORL1Q5H9F3 1711 aa31.18■■■□□ 2.58
COMMD4-204ENST00000561662 PLPPR3Q6T4P5 718 aa31.18■■■□□ 2.58
COMMD4-204ENST00000561662 FRMPD1Q5SYB0 1578 aa31.17■■■□□ 2.58
COMMD4-204ENST00000561662 PCF11O94913 1555 aaKnown RBP31.17■■■□□ 2.58
COMMD4-204ENST00000561662 NEO1Q92859 1461 aa31.15■■■□□ 2.58
COMMD4-204ENST00000561662 LMTK3Q96Q04 1460 aa31.14■■■□□ 2.58
COMMD4-204ENST00000561662 RANGAP1P46060 587 aaPredicted RBP31.12■■■□□ 2.57
COMMD4-204ENST00000561662 HSPA2P54652 639 aa31.11■■■□□ 2.57
COMMD4-204ENST00000561662 RAPGEF6Q8TEU7 1601 aa31.1■■■□□ 2.57
COMMD4-204ENST00000561662 RIMS1Q86UR5 1692 aaKnown RBP31.08■■■□□ 2.57
COMMD4-204ENST00000561662 SAMD9Q5K651 1589 aa31.05■■■□□ 2.56
COMMD4-204ENST00000561662 NUP153P49790 1475 aaKnown RBP31.02■■■□□ 2.56
COMMD4-204ENST00000561662 ARHGEF40Q8TER5 1519 aa31.02■■■□□ 2.56
COMMD4-204ENST00000561662 DENND4BO75064 1496 aaPredicted RBP30.99■■■□□ 2.55
COMMD4-204ENST00000561662 FHOD3Q2V2M9 1422 aa30.96■■■□□ 2.55
COMMD4-204ENST00000561662 AKNAQ7Z591 1439 aa30.96■■■□□ 2.55
COMMD4-204ENST00000561662 RICTORQ6R327 1708 aa30.95■■■□□ 2.54
COMMD4-204ENST00000561662 MLECQ14165 292 aa30.94■■■□□ 2.54
COMMD4-204ENST00000561662 PLEKHD1A6NEE1 506 aa30.92■■■□□ 2.54
COMMD4-204ENST00000561662 CSRNP3Q8WYN3 585 aa30.92■■■□□ 2.54
COMMD4-204ENST00000561662 FANCAO15360 1455 aa30.92■■■□□ 2.54
COMMD4-204ENST00000561662 YEATS2Q9ULM3 1422 aa30.9■■■□□ 2.54
COMMD4-204ENST00000561662 SIGLEC1Q9BZZ2 1709 aa30.9■■■□□ 2.54
COMMD4-204ENST00000561662 CERKQ8TCT0 537 aa30.86■■■□□ 2.53
COMMD4-204ENST00000561662 POGZQ7Z3K3 1410 aa30.86■■■□□ 2.53
COMMD4-204ENST00000561662 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.86■■■□□ 2.53
COMMD4-204ENST00000561662 TTC37Q6PGP7 1564 aa30.84■■■□□ 2.53
COMMD4-204ENST00000561662 ZFYVE16Q7Z3T8 1539 aa30.84■■■□□ 2.53
COMMD4-204ENST00000561662 CFAP74Q9C0B2 1584 aa30.8■■■□□ 2.52
COMMD4-204ENST00000561662 ZMYM4Q5VZL5 1548 aa30.79■■■□□ 2.52
COMMD4-204ENST00000561662 EFCAB5A4FU69 1503 aa30.78■■■□□ 2.52
COMMD4-204ENST00000561662 HECW1Q76N89 1606 aa30.76■■■□□ 2.52
COMMD4-204ENST00000561662 FER1L4A9Z1Z3 1794 aa30.75■■■□□ 2.51
COMMD4-204ENST00000561662 CDK13Q14004 1512 aaKnown RBP30.73■■■□□ 2.51
COMMD4-204ENST00000561662 SCAPERQ9BY12 1400 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms