RNA–Protein interactions for RNA: ENST00000561387.1

UBAP1L-204, Transcript of ubiquitin associated protein 1 like, humanhuman

TSL 1 (best)

Gene UBAP1L, Length 7,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1L-204ENST00000561387 CDCA8Q53HL2 280 aa12.73□□□□□ -0.37
UBAP1L-204ENST00000561387 CHMP7Q8WUX9 453 aaPredicted RBP12.72□□□□□ -0.37
UBAP1L-204ENST00000561387 EEA1Q15075 1411 aa12.71□□□□□ -0.37
UBAP1L-204ENST00000561387 CFAP53Q96M91 514 aa12.7□□□□□ -0.38
UBAP1L-204ENST00000561387 CLIP1P30622 1438 aa12.7□□□□□ -0.38
UBAP1L-204ENST00000561387 NBR1Q14596 966 aa12.7□□□□□ -0.38
UBAP1L-204ENST00000561387 SCAF1Q9H7N4 1312 aaKnown RBP12.69□□□□□ -0.38
UBAP1L-204ENST00000561387 CCDC180Q9P1Z9 1646 aa12.69□□□□□ -0.38
UBAP1L-204ENST00000561387 CASC1Q6TDU7 716 aa12.68□□□□□ -0.38
UBAP1L-204ENST00000561387 PPP1R15AO75807 674 aaPredicted RBP12.68□□□□□ -0.38
UBAP1L-204ENST00000561387 TRIM44Q96DX7 344 aaPredicted RBP12.68□□□□□ -0.38
UBAP1L-204ENST00000561387 GOLGA3Q08378 1498 aa12.64□□□□□ -0.39
UBAP1L-204ENST00000561387 ZRSR1Q15695 479 aaKnown RBP12.64□□□□□ -0.39
UBAP1L-204ENST00000561387 PLEKHD1A6NEE1 506 aa12.64□□□□□ -0.39
UBAP1L-204ENST00000561387 ARXQ96QS3 562 aa12.63□□□□□ -0.39
UBAP1L-204ENST00000561387 CHMP4BQ9H444 224 aaKnown RBP12.62□□□□□ -0.39
UBAP1L-204ENST00000561387 KNSTRNQ9Y448 316 aa12.61□□□□□ -0.39
UBAP1L-204ENST00000561387 C14orf37Q86TY3 774 aa12.61□□□□□ -0.39
UBAP1L-204ENST00000561387 A0A0G2JS52 829 aa12.6□□□□□ -0.39
UBAP1L-204ENST00000561387 RB1CC1Q8TDY2 1594 aa12.59□□□□□ -0.39
UBAP1L-204ENST00000561387 RRP7BPQ9NSQ0 103 aa12.59□□□□□ -0.39
UBAP1L-204ENST00000561387 SENP3Q9H4L4 574 aaPredicted RBP12.59□□□□□ -0.39
UBAP1L-204ENST00000561387 TNNT2P45379 298 aaPredicted RBP12.58□□□□□ -0.4
UBAP1L-204ENST00000561387 FTSJ3Q8IY81 847 aaKnown RBP12.58□□□□□ -0.4
UBAP1L-204ENST00000561387 ZBTB7CA1YPR0 619 aa12.58□□□□□ -0.4
UBAP1L-204ENST00000561387 MIER1Q8N108 512 aa12.58□□□□□ -0.4
UBAP1L-204ENST00000561387 PPM1GO15355 546 aaPredicted RBP12.57□□□□□ -0.4
UBAP1L-204ENST00000561387 MS4A1P11836 297 aa12.57□□□□□ -0.4
UBAP1L-204ENST00000561387 NUDCQ9Y266 331 aa12.57□□□□□ -0.4
UBAP1L-204ENST00000561387 PNNQ9H307 717 aaKnown RBP12.55□□□□□ -0.4
UBAP1L-204ENST00000561387 MAPK8IP3Q9UPT6 1336 aa12.55□□□□□ -0.4
UBAP1L-204ENST00000561387 PTMAP06454 111 aaKnown RBP12.55□□□□□ -0.4
UBAP1L-204ENST00000561387 HAP1P54257 671 aaPredicted RBP12.55□□□□□ -0.4
UBAP1L-204ENST00000561387 IRX6P78412 446 aaPredicted RBP12.54□□□□□ -0.4
UBAP1L-204ENST00000561387 CEP162Q5TB80 1403 aa12.53□□□□□ -0.4
UBAP1L-204ENST00000561387 CFDP1Q9UEE9 299 aaPredicted RBP12.53□□□□□ -0.4
UBAP1L-204ENST00000561387 KCNH8Q96L42 1107 aa12.53□□□□□ -0.4
UBAP1L-204ENST00000561387 KIF27Q86VH2 1401 aa12.52□□□□□ -0.41
UBAP1L-204ENST00000561387 GOLGA6L6A8MZA4 724 aa12.52□□□□□ -0.41
UBAP1L-204ENST00000561387 CARD11Q9BXL7 1154 aa12.52□□□□□ -0.41
UBAP1L-204ENST00000561387 ERICH6BQ5W0A0 696 aa12.5□□□□□ -0.41
UBAP1L-204ENST00000561387 CEP164Q9UPV0 1460 aa12.5□□□□□ -0.41
UBAP1L-204ENST00000561387 RGL3Q3MIN7 710 aa12.5□□□□□ -0.41
UBAP1L-204ENST00000561387 PLEKHG5O94827 1062 aa12.49□□□□□ -0.41
UBAP1L-204ENST00000561387 HIRIP3Q9BW71 556 aaPredicted RBP12.49□□□□□ -0.41
UBAP1L-204ENST00000561387 DNTTIP2Q5QJE6 756 aaKnown RBP12.48□□□□□ -0.41
UBAP1L-204ENST00000561387 CFAP44Q96MT7 982 aa12.48□□□□□ -0.41
UBAP1L-204ENST00000561387 NRDCO43847 1150 aa12.48□□□□□ -0.41
UBAP1L-204ENST00000561387 ARID4BQ4LE39 1312 aaPredicted RBP12.48□□□□□ -0.41
UBAP1L-204ENST00000561387 WRNQ14191 1432 aaPredicted RBP eCLIP12.47□□□□□ -0.41
UBAP1L-204ENST00000561387 PPP4R2Q9NY27 417 aa12.46□□□□□ -0.41
UBAP1L-204ENST00000561387 POGKQ9P215 609 aa12.46□□□□□ -0.41
UBAP1L-204ENST00000561387 TNIKQ9UKE5 1360 aa12.46□□□□□ -0.42
UBAP1L-204ENST00000561387 BAZ1BQ9UIG0 1483 aaKnown RBP12.45□□□□□ -0.42
UBAP1L-204ENST00000561387 KANK1Q14678 1352 aa12.43□□□□□ -0.42
UBAP1L-204ENST00000561387 FHAD1B1AJZ9 1412 aa12.43□□□□□ -0.42
UBAP1L-204ENST00000561387 HDGFP51858 240 aaKnown RBP12.43□□□□□ -0.42
UBAP1L-204ENST00000561387 LAS1LQ9Y4W2 734 aaKnown RBP12.43□□□□□ -0.42
UBAP1L-204ENST00000561387 NACADO15069 1562 aa12.42□□□□□ -0.42
UBAP1L-204ENST00000561387 HSP90AB1P08238 724 aaKnown RBP12.42□□□□□ -0.42
UBAP1L-204ENST00000561387 SUPT16HQ9Y5B9 1047 aaKnown RBP12.42□□□□□ -0.42
UBAP1L-204ENST00000561387 OS9Q13438 667 aaPredicted RBP12.42□□□□□ -0.42
UBAP1L-204ENST00000561387 FGD1P98174 961 aa12.41□□□□□ -0.42
UBAP1L-204ENST00000561387 TMF1P82094 1093 aa12.41□□□□□ -0.42
UBAP1L-204ENST00000561387 TIMELESSQ9UNS1 1208 aa12.4□□□□□ -0.42
UBAP1L-204ENST00000561387 NPHP1O15259 732 aa12.4□□□□□ -0.43
UBAP1L-204ENST00000561387 MCCP23508 829 aa12.39□□□□□ -0.43
UBAP1L-204ENST00000561387 KCNJ4P48050 445 aa12.39□□□□□ -0.43
UBAP1L-204ENST00000561387 CCNB3Q8WWL7 1395 aa12.39□□□□□ -0.43
UBAP1L-204ENST00000561387 NEUROD2Q15784 382 aa12.38□□□□□ -0.43
UBAP1L-204ENST00000561387 GOLGA2Q08379 1002 aa12.38□□□□□ -0.43
UBAP1L-204ENST00000561387 FRAT1Q92837 279 aaPredicted RBP12.38□□□□□ -0.43
UBAP1L-204ENST00000561387 SENP3-EIF4A1A0A087X0R7 540 aa12.37□□□□□ -0.43
UBAP1L-204ENST00000561387 HSCBQ8IWL3 235 aa12.37□□□□□ -0.43
UBAP1L-204ENST00000561387 NOP58Q9Y2X3 529 aaKnown RBP12.37□□□□□ -0.43
UBAP1L-204ENST00000561387 GOLGA6L4A6NEF3 574 aa12.36□□□□□ -0.43
UBAP1L-204ENST00000561387 L1TD1Q5T7N2 865 aaKnown RBP12.36□□□□□ -0.43
UBAP1L-204ENST00000561387 CHAF1AQ13111 956 aaPredicted RBP12.36□□□□□ -0.43
UBAP1L-204ENST00000561387 RGS3P49796 1198 aa12.35□□□□□ -0.43
UBAP1L-204ENST00000561387 U2SURPO15042 1029 aaKnown RBP12.35□□□□□ -0.43
UBAP1L-204ENST00000561387 PTMSP20962 102 aa12.34□□□□□ -0.43
UBAP1L-204ENST00000561387 ERCC6Q03468 1493 aa12.34□□□□□ -0.43
UBAP1L-204ENST00000561387 NAP1L5Q96NT1 182 aaPredicted RBP12.34□□□□□ -0.43
UBAP1L-204ENST00000561387 LMOD2Q6P5Q4 547 aa12.34□□□□□ -0.43
UBAP1L-204ENST00000561387 PLCB2Q00722 1185 aa12.33□□□□□ -0.44
UBAP1L-204ENST00000561387 CC2D1BQ5T0F9 858 aaKnown RBP12.32□□□□□ -0.44
UBAP1L-204ENST00000561387 CHMP4AQ9BY43 222 aa12.31□□□□□ -0.44
UBAP1L-204ENST00000561387 CCER2I3L3R5 266 aa12.31□□□□□ -0.44
UBAP1L-204ENST00000561387 CALD1Q05682 793 aaKnown RBP12.31□□□□□ -0.44
UBAP1L-204ENST00000561387 TPRNQ4KMQ1 711 aa12.31□□□□□ -0.44
UBAP1L-204ENST00000561387 TULP1O00294 542 aaPredicted RBP12.31□□□□□ -0.44
UBAP1L-204ENST00000561387 NAP1L2Q9ULW6 460 aaPredicted RBP12.3□□□□□ -0.44
UBAP1L-204ENST00000561387 IPO8O15397 1037 aaKnown RBP12.3□□□□□ -0.44
UBAP1L-204ENST00000561387 BAZ1AQ9NRL2 1556 aaPredicted RBP12.3□□□□□ -0.44
UBAP1L-204ENST00000561387 RTF1Q92541 710 aaKnown RBP12.29□□□□□ -0.44
UBAP1L-204ENST00000561387 MORC1Q86VD1 984 aa12.28□□□□□ -0.44
UBAP1L-204ENST00000561387 MSNP26038 577 aaKnown RBP12.28□□□□□ -0.44
UBAP1L-204ENST00000561387 DCAF11Q8TEB1 546 aa12.28□□□□□ -0.44
UBAP1L-204ENST00000561387 SRPK2P78362 688 aaKnown RBP12.27□□□□□ -0.45
UBAP1L-204ENST00000561387 KTN1Q86UP2 1357 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms