RNA–Protein interactions for RNA: ENST00000561040.1

MEIS3-209, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-209ENST00000561040 GRIN2BQ13224 1484 aa25.07■■□□□ 1.6
MEIS3-209ENST00000561040 FHAD1B1AJZ9 1412 aa25.07■■□□□ 1.6
MEIS3-209ENST00000561040 MAP3K1Q13233 1512 aa25.05■■□□□ 1.6
MEIS3-209ENST00000561040 TTBK1Q5TCY1 1321 aaPredicted RBP25.05■■□□□ 1.6
MEIS3-209ENST00000561040 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
MEIS3-209ENST00000561040 AQRO60306 1485 aaKnown RBP eCLIP25.01■■□□□ 1.59
MEIS3-209ENST00000561040 SAMD9Q5K651 1589 aa24.96■■□□□ 1.59
MEIS3-209ENST00000561040 EIF4G3O43432 1585 aaKnown RBP24.94■■□□□ 1.58
MEIS3-209ENST00000561040 TIAM1Q13009 1591 aa24.94■■□□□ 1.58
MEIS3-209ENST00000561040 ZNF608Q9ULD9 1512 aaPredicted RBP24.93■■□□□ 1.58
MEIS3-209ENST00000561040 FYCO1Q9BQS8 1478 aa24.91■■□□□ 1.58
MEIS3-209ENST00000561040 FMN1Q68DA7 1419 aa24.91■■□□□ 1.58
MEIS3-209ENST00000561040 CFAP43Q8NDM7 1665 aa24.9■■□□□ 1.58
MEIS3-209ENST00000561040 PCF11O94913 1555 aaKnown RBP24.89■■□□□ 1.58
MEIS3-209ENST00000561040 FHOD3Q2V2M9 1422 aa24.88■■□□□ 1.57
MEIS3-209ENST00000561040 CASKIN1Q8WXD9 1431 aa24.87■■□□□ 1.57
MEIS3-209ENST00000561040 IQGAP2Q13576 1575 aa24.86■■□□□ 1.57
MEIS3-209ENST00000561040 MAGI1Q96QZ7 1491 aaPredicted RBP24.84■■□□□ 1.57
MEIS3-209ENST00000561040 KANK4Q5T7N3 995 aaPredicted RBP24.84■■□□□ 1.57
MEIS3-209ENST00000561040 SNAPC4Q5SXM2 1469 aa24.82■■□□□ 1.56
MEIS3-209ENST00000561040 P3H3Q8IVL6 736 aa24.79■■□□□ 1.56
MEIS3-209ENST00000561040 RRBP1Q9P2E9 1410 aaKnown RBP24.79■■□□□ 1.56
MEIS3-209ENST00000561040 LRRC9Q6ZRR7 1453 aa24.79■■□□□ 1.56
MEIS3-209ENST00000561040 GRIN2AQ12879 1464 aa24.76■■□□□ 1.55
MEIS3-209ENST00000561040 CCER1Q8TC90 406 aaPredicted RBP24.75■■□□□ 1.55
MEIS3-209ENST00000561040 UGGT2Q9NYU1 1516 aa24.74■■□□□ 1.55
MEIS3-209ENST00000561040 KIAA0586Q9BVV6 1533 aa24.74■■□□□ 1.55
MEIS3-209ENST00000561040 SYNJ2O15056 1496 aa24.72■■□□□ 1.55
MEIS3-209ENST00000561040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.7■■□□□ 1.55
MEIS3-209ENST00000561040 CCNB3Q8WWL7 1395 aa24.67■■□□□ 1.54
MEIS3-209ENST00000561040 HNRNPUL2Q1KMD3 747 aaKnown RBP24.65■■□□□ 1.54
MEIS3-209ENST00000561040 ATP1B4Q9UN42 357 aaPredicted RBP24.63■■□□□ 1.53
MEIS3-209ENST00000561040 CCDC18Q5T9S5 1454 aa24.62■■□□□ 1.53
MEIS3-209ENST00000561040 HECW1Q76N89 1606 aa24.62■■□□□ 1.53
MEIS3-209ENST00000561040 CHMP7Q8WUX9 453 aaPredicted RBP24.6■■□□□ 1.53
MEIS3-209ENST00000561040 LRRIQ1Q96JM4 1722 aa24.6■■□□□ 1.53
MEIS3-209ENST00000561040 KIAA0556O60303 1618 aa24.59■■□□□ 1.53
MEIS3-209ENST00000561040 CEP170Q5SW79 1584 aa24.57■■□□□ 1.52
MEIS3-209ENST00000561040 NUP160Q12769 1436 aa24.55■■□□□ 1.52
MEIS3-209ENST00000561040 EHBP1L1Q8N3D4 1523 aa24.54■■□□□ 1.52
MEIS3-209ENST00000561040 DISP1Q96F81 1524 aa24.53■■□□□ 1.52
MEIS3-209ENST00000561040 MTUS2Q5JR59 1369 aa24.52■■□□□ 1.52
MEIS3-209ENST00000561040 PHLDB1Q86UU1 1377 aa24.52■■□□□ 1.52
MEIS3-209ENST00000561040 SUPT6HQ7KZ85 1726 aaKnown RBP24.51■■□□□ 1.51
MEIS3-209ENST00000561040 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.51■■□□□ 1.51
MEIS3-209ENST00000561040 EPRSP07814 1512 aaKnown RBP24.45■■□□□ 1.5
MEIS3-209ENST00000561040 CARMIL2Q6F5E8 1435 aa24.44■■□□□ 1.5
MEIS3-209ENST00000561040 FBLN2P98095 1184 aa24.43■■□□□ 1.5
MEIS3-209ENST00000561040 RAPGEF6Q8TEU7 1601 aa24.41■■□□□ 1.5
MEIS3-209ENST00000561040 CLSPNQ9HAW4 1339 aa24.41■■□□□ 1.5
MEIS3-209ENST00000561040 NCOA2Q15596 1464 aa24.4■■□□□ 1.5
MEIS3-209ENST00000561040 FGD6Q6ZV73 1430 aa24.38■■□□□ 1.49
MEIS3-209ENST00000561040 ARHGEF11O15085 1522 aa24.38■■□□□ 1.49
MEIS3-209ENST00000561040 MYOM3Q5VTT5 1437 aa24.36■■□□□ 1.49
MEIS3-209ENST00000561040 CHD1O14646 1710 aa24.35■■□□□ 1.49
MEIS3-209ENST00000561040 JPH4Q96JJ6 628 aa24.34■■□□□ 1.49
MEIS3-209ENST00000561040 MAGI3Q5TCQ9 1506 aa24.34■■□□□ 1.49
MEIS3-209ENST00000561040 FAM50AQ14320 339 aaKnown RBP24.33■■□□□ 1.48
MEIS3-209ENST00000561040 CDK13Q14004 1512 aaKnown RBP24.31■■□□□ 1.48
MEIS3-209ENST00000561040 NUP153P49790 1475 aaKnown RBP24.31■■□□□ 1.48
MEIS3-209ENST00000561040 DHX57Q6P158 1386 aaKnown RBP24.29■■□□□ 1.48
MEIS3-209ENST00000561040 SETD5Q9C0A6 1442 aa24.28■■□□□ 1.48
MEIS3-209ENST00000561040 ITGAEP38570 1179 aa24.28■■□□□ 1.48
MEIS3-209ENST00000561040 PELP1Q8IZL8 1130 aaKnown RBP24.28■■□□□ 1.48
MEIS3-209ENST00000561040 CDK11AQ9UQ88 783 aaPredicted RBP24.26■■□□□ 1.47
MEIS3-209ENST00000561040 PTPN23Q9H3S7 1636 aa24.25■■□□□ 1.47
MEIS3-209ENST00000561040 MIA2Q96PC5 1412 aa24.23■■□□□ 1.47
MEIS3-209ENST00000561040 TCOF1Q13428 1488 aaKnown RBP24.22■■□□□ 1.47
MEIS3-209ENST00000561040 RAB3GAP2Q9H2M9 1393 aa24.22■■□□□ 1.47
MEIS3-209ENST00000561040 SHROOM2Q13796 1616 aa24.21■■□□□ 1.47
MEIS3-209ENST00000561040 ABCA8O94911 1581 aa24.2■■□□□ 1.46
MEIS3-209ENST00000561040 PLB1Q6P1J6 1458 aa24.18■■□□□ 1.46
MEIS3-209ENST00000561040 PRG4Q92954 1404 aaPredicted RBP24.17■■□□□ 1.46
MEIS3-209ENST00000561040 ADCY10Q96PN6 1610 aa24.16■■□□□ 1.46
MEIS3-209ENST00000561040 TROQ12816 1431 aaPredicted RBP24.15■■□□□ 1.46
MEIS3-209ENST00000561040 ITSN2Q9NZM3 1697 aa24.11■■□□□ 1.45
MEIS3-209ENST00000561040 HFM1A2PYH4 1435 aa24.1■■□□□ 1.45
MEIS3-209ENST00000561040 PTPRGP23470 1445 aa24.08■■□□□ 1.45
MEIS3-209ENST00000561040 ARID3CA6NKF2 412 aa24.07■■□□□ 1.44
MEIS3-209ENST00000561040 AKNAQ7Z591 1439 aa24.06■■□□□ 1.44
MEIS3-209ENST00000561040 CLASP1Q7Z460 1538 aa24.05■■□□□ 1.44
MEIS3-209ENST00000561040 PTPRKQ15262 1439 aa24.03■■□□□ 1.44
MEIS3-209ENST00000561040 GCC2Q8IWJ2 1684 aa24.03■■□□□ 1.44
MEIS3-209ENST00000561040 ATP10BO94823 1461 aa24.01■■□□□ 1.43
MEIS3-209ENST00000561040 KIF14Q15058 1648 aa24.01■■□□□ 1.43
MEIS3-209ENST00000561040 MAPKBP1O60336 1514 aa24.01■■□□□ 1.43
MEIS3-209ENST00000561040 NAIPQ13075 1403 aa23.99■■□□□ 1.43
MEIS3-209ENST00000561040 PLEKHD1A6NEE1 506 aa23.98■■□□□ 1.43
MEIS3-209ENST00000561040 DNMT1P26358 1616 aaKnown RBP23.98■■□□□ 1.43
MEIS3-209ENST00000561040 ACIN1Q9UKV3 1341 aaKnown RBP23.98■■□□□ 1.43
MEIS3-209ENST00000561040 UACAQ9BZF9 1416 aa23.97■■□□□ 1.43
MEIS3-209ENST00000561040 GPATCH8Q9UKJ3 1502 aaKnown RBP23.93■■□□□ 1.42
MEIS3-209ENST00000561040 ZNF316A6NFI3 1004 aaPredicted RBP23.93■■□□□ 1.42
MEIS3-209ENST00000561040 ROCK1Q13464 1354 aa23.92■■□□□ 1.42
MEIS3-209ENST00000561040 DAPK1P53355 1430 aa23.92■■□□□ 1.42
MEIS3-209ENST00000561040 ABCC2Q92887 1545 aa23.91■■□□□ 1.42
MEIS3-209ENST00000561040 CDC42BPAQ5VT25 1732 aa23.9■■□□□ 1.42
MEIS3-209ENST00000561040 CAMSAP2Q08AD1 1489 aa23.89■■□□□ 1.41
MEIS3-209ENST00000561040 ABCC10Q5T3U5 1492 aa23.89■■□□□ 1.41
MEIS3-209ENST00000561040 CFDP1Q9UEE9 299 aaPredicted RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms