RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 NPM1P06748 294 aaKnown RBP eCLIP33.14■■■□□ 2.9
TPM1-226ENST00000560959 FAM69CQ0P6D2 419 aa33.11■■■□□ 2.89
TPM1-226ENST00000560959 ABCC10Q5T3U5 1492 aa33.11■■■□□ 2.89
TPM1-226ENST00000560959 MAPKBP1O60336 1514 aa33.05■■■□□ 2.88
TPM1-226ENST00000560959 RUSC2Q8N2Y8 1516 aa33.05■■■□□ 2.88
TPM1-226ENST00000560959 KIAA0586Q9BVV6 1533 aa32.97■■■□□ 2.87
TPM1-226ENST00000560959 IGF1RP08069 1367 aa32.93■■■□□ 2.86
TPM1-226ENST00000560959 DIP2BQ9P265 1576 aa32.92■■■□□ 2.86
TPM1-226ENST00000560959 ADCY10Q96PN6 1610 aa32.91■■■□□ 2.86
TPM1-226ENST00000560959 KIF27Q86VH2 1401 aa32.84■■■□□ 2.85
TPM1-226ENST00000560959 CUL7Q14999 1698 aa32.77■■■□□ 2.84
TPM1-226ENST00000560959 KDM4FA0A1W2PPD8 638 aa32.76■■■□□ 2.83
TPM1-226ENST00000560959 PTPRGP23470 1445 aa32.76■■■□□ 2.83
TPM1-226ENST00000560959 KDM6BO15054 1643 aa32.75■■■□□ 2.83
TPM1-226ENST00000560959 CARMIL1Q5VZK9 1371 aa32.68■■■□□ 2.82
TPM1-226ENST00000560959 TNIKQ9UKE5 1360 aa32.66■■■□□ 2.82
TPM1-226ENST00000560959 CARMIL2Q6F5E8 1435 aa32.66■■■□□ 2.82
TPM1-226ENST00000560959 ABCC2Q92887 1545 aa32.62■■■□□ 2.81
TPM1-226ENST00000560959 PLB1Q6P1J6 1458 aa32.59■■■□□ 2.81
TPM1-226ENST00000560959 TSPOAP1O95153 1857 aa32.59■■■□□ 2.81
TPM1-226ENST00000560959 UHRF1BP1LA0JNW5 1464 aa32.55■■■□□ 2.8
TPM1-226ENST00000560959 ASXL2Q76L83 1435 aa32.55■■■□□ 2.8
TPM1-226ENST00000560959 GLI2P10070 1586 aa32.53■■■□□ 2.8
TPM1-226ENST00000560959 TTBK1Q5TCY1 1321 aaPredicted RBP32.51■■■□□ 2.8
TPM1-226ENST00000560959 UACAQ9BZF9 1416 aa32.48■■■□□ 2.79
TPM1-226ENST00000560959 IQGAP2Q13576 1575 aa32.48■■■□□ 2.79
TPM1-226ENST00000560959 DISP1Q96F81 1524 aa32.41■■■□□ 2.78
TPM1-226ENST00000560959 PPRC1Q5VV67 1664 aaKnown RBP32.39■■■□□ 2.78
TPM1-226ENST00000560959 KDM5BQ9UGL1 1544 aa32.38■■■□□ 2.77
TPM1-226ENST00000560959 EPRSP07814 1512 aaKnown RBP32.35■■■□□ 2.77
TPM1-226ENST00000560959 UGGT2Q9NYU1 1516 aa32.32■■■□□ 2.76
TPM1-226ENST00000560959 COL17A1Q9UMD9 1497 aaPredicted RBP32.31■■■□□ 2.76
TPM1-226ENST00000560959 TEX14Q8IWB6 1497 aa32.3■■■□□ 2.76
TPM1-226ENST00000560959 ADGRL1O94910 1474 aa32.29■■■□□ 2.76
TPM1-226ENST00000560959 RAPGEF2Q9Y4G8 1499 aa32.29■■■□□ 2.76
TPM1-226ENST00000560959 MAP3K4Q9Y6R4 1608 aa32.26■■■□□ 2.76
TPM1-226ENST00000560959 ILDR1Q86SU0 546 aaPredicted RBP32.24■■■□□ 2.75
TPM1-226ENST00000560959 ZCCHC11Q5TAX3 1644 aaKnown RBP32.18■■■□□ 2.74
TPM1-226ENST00000560959 KIAA0556O60303 1618 aa32.18■■■□□ 2.74
TPM1-226ENST00000560959 WDR7Q9Y4E6 1490 aa32.15■■■□□ 2.74
TPM1-226ENST00000560959 MAGI3Q5TCQ9 1506 aa32.05■■■□□ 2.72
TPM1-226ENST00000560959 CD109Q6YHK3 1445 aa32.04■■■□□ 2.72
TPM1-226ENST00000560959 GOLGA3Q08378 1498 aa32.03■■■□□ 2.72
TPM1-226ENST00000560959 HECW2Q9P2P5 1572 aa31.98■■■□□ 2.71
TPM1-226ENST00000560959 KCNH8Q96L42 1107 aa31.97■■■□□ 2.71
TPM1-226ENST00000560959 ABCA8O94911 1581 aa31.95■■■□□ 2.71
TPM1-226ENST00000560959 CFAP43Q8NDM7 1665 aa31.94■■■□□ 2.7
TPM1-226ENST00000560959 CTTNBP2Q8WZ74 1663 aa31.89■■■□□ 2.7
TPM1-226ENST00000560959 FAM9AQ8IZU1 332 aaPredicted RBP31.87■■■□□ 2.69
TPM1-226ENST00000560959 PRXQ9BXM0 1461 aa31.84■■■□□ 2.69
TPM1-226ENST00000560959 ARAP3Q8WWN8 1544 aa31.83■■■□□ 2.69
TPM1-226ENST00000560959 PHLDB1Q86UU1 1377 aa31.81■■■□□ 2.68
TPM1-226ENST00000560959 ATP10BO94823 1461 aa31.73■■■□□ 2.67
TPM1-226ENST00000560959 KIF21BO75037 1637 aa31.66■■■□□ 2.66
TPM1-226ENST00000560959 P3H3Q8IVL6 736 aa31.63■■■□□ 2.65
TPM1-226ENST00000560959 ARID3CA6NKF2 412 aa31.62■■■□□ 2.65
TPM1-226ENST00000560959 ABCA9Q8IUA7 1624 aa31.62■■■□□ 2.65
TPM1-226ENST00000560959 NEO1Q92859 1461 aa31.6■■■□□ 2.65
TPM1-226ENST00000560959 RAPGEF3O95398 923 aa31.58■■■□□ 2.65
TPM1-226ENST00000560959 FBXO41Q8TF61 875 aa31.58■■■□□ 2.65
TPM1-226ENST00000560959 PTPRMP28827 1452 aa31.57■■■□□ 2.64
TPM1-226ENST00000560959 ADAMTSL3P82987 1691 aa31.54■■■□□ 2.64
TPM1-226ENST00000560959 CSRNP3Q8WYN3 585 aa31.51■■■□□ 2.63
TPM1-226ENST00000560959 SAMD9Q5K651 1589 aa31.5■■■□□ 2.63
TPM1-226ENST00000560959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.48■■■□□ 2.63
TPM1-226ENST00000560959 HNRNPUL2Q1KMD3 747 aaKnown RBP31.48■■■□□ 2.63
TPM1-226ENST00000560959 RAPGEF6Q8TEU7 1601 aa31.47■■■□□ 2.63
TPM1-226ENST00000560959 ARID4BQ4LE39 1312 aaPredicted RBP31.42■■■□□ 2.62
TPM1-226ENST00000560959 NUP153P49790 1475 aaKnown RBP31.4■■■□□ 2.62
TPM1-226ENST00000560959 BCORL1Q5H9F3 1711 aa31.4■■■□□ 2.62
TPM1-226ENST00000560959 PLEKHD1A6NEE1 506 aa31.39■■■□□ 2.62
TPM1-226ENST00000560959 FRMPD1Q5SYB0 1578 aa31.39■■■□□ 2.61
TPM1-226ENST00000560959 DENND4BO75064 1496 aaPredicted RBP31.34■■■□□ 2.61
TPM1-226ENST00000560959 PCF11O94913 1555 aaKnown RBP31.34■■■□□ 2.61
TPM1-226ENST00000560959 FHOD3Q2V2M9 1422 aa31.32■■■□□ 2.61
TPM1-226ENST00000560959 AKNAQ7Z591 1439 aa31.32■■■□□ 2.6
TPM1-226ENST00000560959 MADDQ8WXG6 1647 aa31.31■■■□□ 2.6
TPM1-226ENST00000560959 LMTK3Q96Q04 1460 aa31.31■■■□□ 2.6
TPM1-226ENST00000560959 EEA1Q15075 1411 aa31.29■■■□□ 2.6
TPM1-226ENST00000560959 ARHGEF40Q8TER5 1519 aa31.28■■■□□ 2.6
TPM1-226ENST00000560959 FANCAO15360 1455 aa31.26■■■□□ 2.59
TPM1-226ENST00000560959 POGZQ7Z3K3 1410 aa31.24■■■□□ 2.59
TPM1-226ENST00000560959 RICTORQ6R327 1708 aa31.22■■■□□ 2.59
TPM1-226ENST00000560959 CFAP74Q9C0B2 1584 aa31.22■■■□□ 2.59
TPM1-226ENST00000560959 MAGI2Q86UL8 1455 aa31.21■■■□□ 2.59
TPM1-226ENST00000560959 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.2■■■□□ 2.59
TPM1-226ENST00000560959 RANGAP1P46060 587 aaPredicted RBP31.2■■■□□ 2.59
TPM1-226ENST00000560959 ZMYM4Q5VZL5 1548 aa31.19■■■□□ 2.58
TPM1-226ENST00000560959 RIMS1Q86UR5 1692 aaKnown RBP31.16■■■□□ 2.58
TPM1-226ENST00000560959 EFCAB5A4FU69 1503 aa31.14■■■□□ 2.57
TPM1-226ENST00000560959 ZFYVE16Q7Z3T8 1539 aa31.12■■■□□ 2.57
TPM1-226ENST00000560959 HSPA2P54652 639 aa31.11■■■□□ 2.57
TPM1-226ENST00000560959 YEATS2Q9ULM3 1422 aa31.11■■■□□ 2.57
TPM1-226ENST00000560959 PLCH2O75038 1416 aa31.09■■■□□ 2.57
TPM1-226ENST00000560959 TTC37Q6PGP7 1564 aa31.08■■■□□ 2.57
TPM1-226ENST00000560959 SCAPERQ9BY12 1400 aa31.06■■■□□ 2.56
TPM1-226ENST00000560959 HECW1Q76N89 1606 aa31.02■■■□□ 2.56
TPM1-226ENST00000560959 MLECQ14165 292 aa31■■■□□ 2.55
TPM1-226ENST00000560959 PLPPR3Q6T4P5 718 aa31■■■□□ 2.55
TPM1-226ENST00000560959 CERKQ8TCT0 537 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms