RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 MAPKBP1O60336 1514 aa17.73■□□□□ 0.43
HERC1-210ENST00000560897 PRG4Q92954 1404 aaPredicted RBP17.72■□□□□ 0.43
HERC1-210ENST00000560897 TSPOAP1O95153 1857 aa17.71■□□□□ 0.43
HERC1-210ENST00000560897 FHAD1B1AJZ9 1412 aa17.69■□□□□ 0.42
HERC1-210ENST00000560897 JPH4Q96JJ6 628 aa17.64■□□□□ 0.41
HERC1-210ENST00000560897 ADGRL1O94910 1474 aa17.63■□□□□ 0.41
HERC1-210ENST00000560897 HECW2Q9P2P5 1572 aa17.62■□□□□ 0.41
HERC1-210ENST00000560897 WRNQ14191 1432 aaPredicted RBP eCLIP17.62■□□□□ 0.41
HERC1-210ENST00000560897 ADCY10Q96PN6 1610 aa17.6■□□□□ 0.41
HERC1-210ENST00000560897 ERICH3Q5RHP9 1530 aa17.57■□□□□ 0.4
HERC1-210ENST00000560897 RUSC2Q8N2Y8 1516 aa17.53■□□□□ 0.4
HERC1-210ENST00000560897 FBXO41Q8TF61 875 aa17.51■□□□□ 0.39
HERC1-210ENST00000560897 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
HERC1-210ENST00000560897 BIVM-ERCC5R4GMW8 1640 aa17.43■□□□□ 0.38
HERC1-210ENST00000560897 PPRC1Q5VV67 1664 aaKnown RBP17.41■□□□□ 0.38
HERC1-210ENST00000560897 GLI2P10070 1586 aa17.4■□□□□ 0.38
HERC1-210ENST00000560897 PLB1Q6P1J6 1458 aa17.39■□□□□ 0.37
HERC1-210ENST00000560897 TTBK1Q5TCY1 1321 aaPredicted RBP17.38■□□□□ 0.37
HERC1-210ENST00000560897 PTPRGP23470 1445 aa17.37■□□□□ 0.37
HERC1-210ENST00000560897 ASXL2Q76L83 1435 aa17.37■□□□□ 0.37
HERC1-210ENST00000560897 TEX14Q8IWB6 1497 aa17.36■□□□□ 0.37
HERC1-210ENST00000560897 ABCC2Q92887 1545 aa17.36■□□□□ 0.37
HERC1-210ENST00000560897 KIAA0586Q9BVV6 1533 aa17.36■□□□□ 0.37
HERC1-210ENST00000560897 COL17A1Q9UMD9 1497 aaPredicted RBP17.31■□□□□ 0.36
HERC1-210ENST00000560897 CUL7Q14999 1698 aa17.3■□□□□ 0.36
HERC1-210ENST00000560897 LMTK3Q96Q04 1460 aa17.3■□□□□ 0.36
HERC1-210ENST00000560897 CARMIL2Q6F5E8 1435 aa17.28■□□□□ 0.36
HERC1-210ENST00000560897 MAP3K4Q9Y6R4 1608 aa17.28■□□□□ 0.36
HERC1-210ENST00000560897 TNIKQ9UKE5 1360 aa17.28■□□□□ 0.36
HERC1-210ENST00000560897 EPRSP07814 1512 aaKnown RBP17.25■□□□□ 0.35
HERC1-210ENST00000560897 UHRF1BP1LA0JNW5 1464 aa17.22■□□□□ 0.35
HERC1-210ENST00000560897 UACAQ9BZF9 1416 aa17.21■□□□□ 0.34
HERC1-210ENST00000560897 KIF21BO75037 1637 aa17.15■□□□□ 0.34
HERC1-210ENST00000560897 KDM5BQ9UGL1 1544 aa17.15■□□□□ 0.34
HERC1-210ENST00000560897 ZCCHC11Q5TAX3 1644 aaKnown RBP17.14■□□□□ 0.33
HERC1-210ENST00000560897 IGF1RP08069 1367 aa17.12■□□□□ 0.33
HERC1-210ENST00000560897 KIF27Q86VH2 1401 aa17.12■□□□□ 0.33
HERC1-210ENST00000560897 IQGAP2Q13576 1575 aa17.11■□□□□ 0.33
HERC1-210ENST00000560897 SOCS7O14512 581 aa17.1■□□□□ 0.33
HERC1-210ENST00000560897 WDR7Q9Y4E6 1490 aa17.1■□□□□ 0.33
HERC1-210ENST00000560897 PTPRMP28827 1452 aa17.08■□□□□ 0.32
HERC1-210ENST00000560897 CD109Q6YHK3 1445 aa17.08■□□□□ 0.32
HERC1-210ENST00000560897 CFAP43Q8NDM7 1665 aa17.07■□□□□ 0.32
HERC1-210ENST00000560897 DISP3Q9P2K9 1392 aa17.07■□□□□ 0.32
HERC1-210ENST00000560897 MAGI3Q5TCQ9 1506 aa17.06■□□□□ 0.32
HERC1-210ENST00000560897 SUPT5HO00267 1087 aaKnown RBP17.06■□□□□ 0.32
HERC1-210ENST00000560897 PCF11O94913 1555 aaKnown RBP17.06■□□□□ 0.32
HERC1-210ENST00000560897 CARMIL1Q5VZK9 1371 aa17.04■□□□□ 0.32
HERC1-210ENST00000560897 DISP1Q96F81 1524 aa17.02■□□□□ 0.32
HERC1-210ENST00000560897 ADAMTSL3P82987 1691 aa17.01■□□□□ 0.31
HERC1-210ENST00000560897 ILDR2Q71H61 639 aa17■□□□□ 0.31
HERC1-210ENST00000560897 KCNH8Q96L42 1107 aa17■□□□□ 0.31
HERC1-210ENST00000560897 CERKQ8TCT0 537 aa16.97■□□□□ 0.31
HERC1-210ENST00000560897 KIAA0556O60303 1618 aa16.96■□□□□ 0.31
HERC1-210ENST00000560897 ARID4BQ4LE39 1312 aaPredicted RBP16.96■□□□□ 0.3
HERC1-210ENST00000560897 ARAP3Q8WWN8 1544 aa16.95■□□□□ 0.3
HERC1-210ENST00000560897 UGGT2Q9NYU1 1516 aa16.95■□□□□ 0.3
HERC1-210ENST00000560897 MADDQ8WXG6 1647 aa16.93■□□□□ 0.3
HERC1-210ENST00000560897 BCORL1Q5H9F3 1711 aa16.93■□□□□ 0.3
HERC1-210ENST00000560897 HSPA2P54652 639 aa16.89■□□□□ 0.29
HERC1-210ENST00000560897 SPATA31D1Q6ZQQ2 1576 aa16.89■□□□□ 0.29
HERC1-210ENST00000560897 PHLDB1Q86UU1 1377 aa16.88■□□□□ 0.29
HERC1-210ENST00000560897 RIMS1Q86UR5 1692 aaKnown RBP16.88■□□□□ 0.29
HERC1-210ENST00000560897 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
HERC1-210ENST00000560897 RAPGEF3O95398 923 aa16.83■□□□□ 0.28
HERC1-210ENST00000560897 ABCA8O94911 1581 aa16.82■□□□□ 0.28
HERC1-210ENST00000560897 RAPGEF2Q9Y4G8 1499 aa16.82■□□□□ 0.28
HERC1-210ENST00000560897 GOLGA3Q08378 1498 aa16.81■□□□□ 0.28
HERC1-210ENST00000560897 FAM9AQ8IZU1 332 aaPredicted RBP16.81■□□□□ 0.28
HERC1-210ENST00000560897 POGZQ7Z3K3 1410 aa16.79■□□□□ 0.28
HERC1-210ENST00000560897 NEO1Q92859 1461 aa16.78■□□□□ 0.28
HERC1-210ENST00000560897 ABCA9Q8IUA7 1624 aa16.77■□□□□ 0.27
HERC1-210ENST00000560897 ARHGEF40Q8TER5 1519 aa16.76■□□□□ 0.27
HERC1-210ENST00000560897 CTTNBP2Q8WZ74 1663 aa16.75■□□□□ 0.27
HERC1-210ENST00000560897 FRMPD1Q5SYB0 1578 aa16.74■□□□□ 0.27
HERC1-210ENST00000560897 ARID3CA6NKF2 412 aa16.74■□□□□ 0.27
HERC1-210ENST00000560897 FANCAO15360 1455 aa16.73■□□□□ 0.27
HERC1-210ENST00000560897 DMRT2Q9Y5R5 561 aa16.72■□□□□ 0.27
HERC1-210ENST00000560897 AKNAQ7Z591 1439 aa16.7■□□□□ 0.26
HERC1-210ENST00000560897 FER1L4A9Z1Z3 1794 aa16.69■□□□□ 0.26
HERC1-210ENST00000560897 DENND4BO75064 1496 aaPredicted RBP16.67■□□□□ 0.26
HERC1-210ENST00000560897 PREX1Q8TCU6 1659 aa16.67■□□□□ 0.26
HERC1-210ENST00000560897 YEATS2Q9ULM3 1422 aa16.67■□□□□ 0.26
HERC1-210ENST00000560897 ATP10BO94823 1461 aa16.67■□□□□ 0.26
HERC1-210ENST00000560897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.66■□□□□ 0.26
HERC1-210ENST00000560897 MLECQ14165 292 aa16.66■□□□□ 0.26
HERC1-210ENST00000560897 HNRNPUL2Q1KMD3 747 aaKnown RBP16.66■□□□□ 0.26
HERC1-210ENST00000560897 TTC37Q6PGP7 1564 aa16.64■□□□□ 0.25
HERC1-210ENST00000560897 RICTORQ6R327 1708 aa16.64■□□□□ 0.25
HERC1-210ENST00000560897 EFCAB5A4FU69 1503 aa16.63■□□□□ 0.25
HERC1-210ENST00000560897 ZFYVE16Q7Z3T8 1539 aa16.62■□□□□ 0.25
HERC1-210ENST00000560897 CFAP74Q9C0B2 1584 aa16.62■□□□□ 0.25
HERC1-210ENST00000560897 FHOD3Q2V2M9 1422 aa16.6■□□□□ 0.25
HERC1-210ENST00000560897 STRCQ7RTU9 1775 aa16.59■□□□□ 0.25
HERC1-210ENST00000560897 UHRF1BP1Q6BDS2 1440 aa16.58■□□□□ 0.24
HERC1-210ENST00000560897 ZMYM4Q5VZL5 1548 aa16.58■□□□□ 0.24
HERC1-210ENST00000560897 MAGI2Q86UL8 1455 aa16.56■□□□□ 0.24
HERC1-210ENST00000560897 P3H3Q8IVL6 736 aa16.56■□□□□ 0.24
HERC1-210ENST00000560897 IQSEC2Q5JU85 1478 aa16.55■□□□□ 0.24
HERC1-210ENST00000560897 SIGLEC1Q9BZZ2 1709 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms