RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 IFT140Q96RY7 1462 aa29.11■■■□□ 2.25
HMBOX1-215ENST00000560599 ADAMTS12P58397 1594 aa29.06■■■□□ 2.24
HMBOX1-215ENST00000560599 TIAM1Q13009 1591 aa29.06■■■□□ 2.24
HMBOX1-215ENST00000560599 CFAP43Q8NDM7 1665 aa29.03■■■□□ 2.24
HMBOX1-215ENST00000560599 ERCC6Q03468 1493 aa29.02■■■□□ 2.24
HMBOX1-215ENST00000560599 PCF11O94913 1555 aaKnown RBP29.02■■■□□ 2.24
HMBOX1-215ENST00000560599 GRIN2BQ13224 1484 aa29.01■■■□□ 2.23
HMBOX1-215ENST00000560599 AQRO60306 1485 aaKnown RBP eCLIP29■■■□□ 2.232e-6■■■■□ 20.6
HMBOX1-215ENST00000560599 THOC2Q8NI27 1593 aaKnown RBP29■■■□□ 2.23
HMBOX1-215ENST00000560599 SAMD9Q5K651 1589 aa28.99■■■□□ 2.23
HMBOX1-215ENST00000560599 FYCO1Q9BQS8 1478 aa28.98■■■□□ 2.23
HMBOX1-215ENST00000560599 CCER1Q8TC90 406 aaPredicted RBP28.97■■■□□ 2.23
HMBOX1-215ENST00000560599 FHOD3Q2V2M9 1422 aa28.94■■■□□ 2.22
HMBOX1-215ENST00000560599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.93■■■□□ 2.22
HMBOX1-215ENST00000560599 RRBP1Q9P2E9 1410 aaKnown RBP28.92■■■□□ 2.22
HMBOX1-215ENST00000560599 KANK4Q5T7N3 995 aaPredicted RBP28.91■■■□□ 2.22
HMBOX1-215ENST00000560599 FMN1Q68DA7 1419 aa28.91■■■□□ 2.22
HMBOX1-215ENST00000560599 CASKIN1Q8WXD9 1431 aa28.91■■■□□ 2.22
HMBOX1-215ENST00000560599 LRRC9Q6ZRR7 1453 aa28.86■■■□□ 2.21
HMBOX1-215ENST00000560599 EIF4G3O43432 1585 aaKnown RBP28.86■■■□□ 2.21
HMBOX1-215ENST00000560599 ZNF608Q9ULD9 1512 aaPredicted RBP28.84■■■□□ 2.21
HMBOX1-215ENST00000560599 IQGAP2Q13576 1575 aa28.83■■■□□ 2.21
HMBOX1-215ENST00000560599 SNAPC4Q5SXM2 1469 aa28.79■■■□□ 2.2
HMBOX1-215ENST00000560599 HNRNPUL2Q1KMD3 747 aaKnown RBP28.79■■■□□ 2.2
HMBOX1-215ENST00000560599 P3H3Q8IVL6 736 aa28.77■■■□□ 2.2
HMBOX1-215ENST00000560599 CCNB3Q8WWL7 1395 aa28.76■■■□□ 2.19
HMBOX1-215ENST00000560599 MAGI1Q96QZ7 1491 aaPredicted RBP28.72■■■□□ 2.19
HMBOX1-215ENST00000560599 UGGT2Q9NYU1 1516 aa28.7■■■□□ 2.18
HMBOX1-215ENST00000560599 GRIN2AQ12879 1464 aa28.66■■■□□ 2.18
HMBOX1-215ENST00000560599 KIAA0586Q9BVV6 1533 aa28.63■■■□□ 2.17
HMBOX1-215ENST00000560599 HECW1Q76N89 1606 aa28.62■■■□□ 2.17
HMBOX1-215ENST00000560599 CCDC18Q5T9S5 1454 aa28.6■■■□□ 2.17
HMBOX1-215ENST00000560599 SYNJ2O15056 1496 aa28.59■■■□□ 2.17
HMBOX1-215ENST00000560599 ATP1B4Q9UN42 357 aaPredicted RBP28.58■■■□□ 2.17
HMBOX1-215ENST00000560599 LRRIQ1Q96JM4 1722 aa28.58■■■□□ 2.17
HMBOX1-215ENST00000560599 PHLDB1Q86UU1 1377 aa28.57■■■□□ 2.16
HMBOX1-215ENST00000560599 EHBP1L1Q8N3D4 1523 aa28.57■■■□□ 2.16
HMBOX1-215ENST00000560599 KIAA0556O60303 1618 aa28.53■■■□□ 2.16
HMBOX1-215ENST00000560599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.51■■■□□ 2.15
HMBOX1-215ENST00000560599 MTUS2Q5JR59 1369 aa28.49■■■□□ 2.15
HMBOX1-215ENST00000560599 SUPT6HQ7KZ85 1726 aaKnown RBP28.49■■■□□ 2.15
HMBOX1-215ENST00000560599 CLSPNQ9HAW4 1339 aa28.49■■■□□ 2.15
HMBOX1-215ENST00000560599 CEP170Q5SW79 1584 aa28.45■■■□□ 2.15
HMBOX1-215ENST00000560599 DISP1Q96F81 1524 aa28.44■■■□□ 2.14
HMBOX1-215ENST00000560599 NUP160Q12769 1436 aa28.41■■■□□ 2.14
HMBOX1-215ENST00000560599 FGD6Q6ZV73 1430 aa28.4■■■□□ 2.14
HMBOX1-215ENST00000560599 DHX57Q6P158 1386 aaKnown RBP28.4■■■□□ 2.14
HMBOX1-215ENST00000560599 NCOA2Q15596 1464 aa28.38■■■□□ 2.13
HMBOX1-215ENST00000560599 EPRSP07814 1512 aaKnown RBP28.38■■■□□ 2.13
HMBOX1-215ENST00000560599 ARHGEF11O15085 1522 aa28.37■■■□□ 2.13
HMBOX1-215ENST00000560599 CHMP7Q8WUX9 453 aaPredicted RBP28.37■■■□□ 2.13
HMBOX1-215ENST00000560599 MYOM3Q5VTT5 1437 aa28.33■■■□□ 2.13
HMBOX1-215ENST00000560599 RAPGEF6Q8TEU7 1601 aa28.33■■■□□ 2.13
HMBOX1-215ENST00000560599 MAGI3Q5TCQ9 1506 aa28.32■■■□□ 2.12
HMBOX1-215ENST00000560599 FAM50AQ14320 339 aaKnown RBP28.31■■■□□ 2.12
HMBOX1-215ENST00000560599 SETD5Q9C0A6 1442 aa28.31■■■□□ 2.12
HMBOX1-215ENST00000560599 ITGAEP38570 1179 aa28.28■■■□□ 2.12
HMBOX1-215ENST00000560599 CDK13Q14004 1512 aaKnown RBP28.27■■■□□ 2.12
HMBOX1-215ENST00000560599 CARMIL2Q6F5E8 1435 aa28.27■■■□□ 2.12
HMBOX1-215ENST00000560599 RAB3GAP2Q9H2M9 1393 aa28.27■■■□□ 2.12
HMBOX1-215ENST00000560599 PTPN23Q9H3S7 1636 aa28.24■■■□□ 2.11
HMBOX1-215ENST00000560599 NUP153P49790 1475 aaKnown RBP28.21■■■□□ 2.11
HMBOX1-215ENST00000560599 TCOF1Q13428 1488 aaKnown RBP28.21■■■□□ 2.11
HMBOX1-215ENST00000560599 FBLN2P98095 1184 aa28.18■■■□□ 2.1
HMBOX1-215ENST00000560599 MIA2Q96PC5 1412 aa28.15■■■□□ 2.1
HMBOX1-215ENST00000560599 CHD1O14646 1710 aa28.11■■■□□ 2.09
HMBOX1-215ENST00000560599 JPH4Q96JJ6 628 aa28.09■■■□□ 2.09
HMBOX1-215ENST00000560599 MAPKBP1O60336 1514 aa28.09■■■□□ 2.09
HMBOX1-215ENST00000560599 HFM1A2PYH4 1435 aa28.08■■■□□ 2.08
HMBOX1-215ENST00000560599 ABCA8O94911 1581 aa28.06■■■□□ 2.08
HMBOX1-215ENST00000560599 ZNF316A6NFI3 1004 aaPredicted RBP28.06■■■□□ 2.08
HMBOX1-215ENST00000560599 CDK11AQ9UQ88 783 aaPredicted RBP28.06■■■□□ 2.08
HMBOX1-215ENST00000560599 ADCY10Q96PN6 1610 aa28.05■■■□□ 2.08
HMBOX1-215ENST00000560599 PLB1Q6P1J6 1458 aa28.04■■■□□ 2.08
HMBOX1-215ENST00000560599 TROQ12816 1431 aaPredicted RBP28.03■■■□□ 2.08
HMBOX1-215ENST00000560599 AKNAQ7Z591 1439 aa28.03■■■□□ 2.08
HMBOX1-215ENST00000560599 GCC2Q8IWJ2 1684 aa28.01■■■□□ 2.07
HMBOX1-215ENST00000560599 ITSN2Q9NZM3 1697 aa28.01■■■□□ 2.07
HMBOX1-215ENST00000560599 PTPRKQ15262 1439 aa28■■■□□ 2.07
HMBOX1-215ENST00000560599 SHROOM2Q13796 1616 aa27.99■■■□□ 2.07
HMBOX1-215ENST00000560599 NAIPQ13075 1403 aa27.95■■■□□ 2.06
HMBOX1-215ENST00000560599 PRG4Q92954 1404 aaPredicted RBP27.94■■■□□ 2.06
HMBOX1-215ENST00000560599 ARID3CA6NKF2 412 aa27.93■■■□□ 2.06
HMBOX1-215ENST00000560599 DIEXFQ68CQ4 756 aaKnown RBP27.92■■■□□ 2.06
HMBOX1-215ENST00000560599 UACAQ9BZF9 1416 aa27.91■■■□□ 2.06
HMBOX1-215ENST00000560599 DNMT1P26358 1616 aaKnown RBP27.91■■■□□ 2.06
HMBOX1-215ENST00000560599 KIF14Q15058 1648 aa27.88■■■□□ 2.05
HMBOX1-215ENST00000560599 PTPRGP23470 1445 aa27.84■■■□□ 2.05
HMBOX1-215ENST00000560599 DAPK1P53355 1430 aa27.83■■■□□ 2.05
HMBOX1-215ENST00000560599 ATP10BO94823 1461 aa27.81■■■□□ 2.04
HMBOX1-215ENST00000560599 ROCK1Q13464 1354 aa27.81■■■□□ 2.04
HMBOX1-215ENST00000560599 ACIN1Q9UKV3 1341 aaKnown RBP27.8■■■□□ 2.04
HMBOX1-215ENST00000560599 CLASP1Q7Z460 1538 aa27.8■■■□□ 2.04
HMBOX1-215ENST00000560599 CAMSAP2Q08AD1 1489 aa27.79■■■□□ 2.04
HMBOX1-215ENST00000560599 GPATCH8Q9UKJ3 1502 aaKnown RBP27.78■■■□□ 2.04
HMBOX1-215ENST00000560599 TIMELESSQ9UNS1 1208 aa27.78■■■□□ 2.04
HMBOX1-215ENST00000560599 ADGBQ8N7X0 1667 aa27.75■■■□□ 2.03
HMBOX1-215ENST00000560599 ABCC5O15440 1437 aa27.75■■■□□ 2.03
HMBOX1-215ENST00000560599 CROCC2H7BZ55 1655 aa27.74■■■□□ 2.03
HMBOX1-215ENST00000560599 ABCC10Q5T3U5 1492 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms