RNA–Protein interactions for RNA: ENST00000560222.1

IPO4-212, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-212ENST00000560222 KDM4FA0A1W2PPD8 638 aa29.19■■■□□ 2.26
IPO4-212ENST00000560222 ERICH3Q5RHP9 1530 aa29.18■■■□□ 2.26
IPO4-212ENST00000560222 TOP2BQ02880 1626 aa29.12■■■□□ 2.25
IPO4-212ENST00000560222 ILDR1Q86SU0 546 aaPredicted RBP29.12■■■□□ 2.25
IPO4-212ENST00000560222 BIVM-ERCC5R4GMW8 1640 aa29.08■■■□□ 2.25
IPO4-212ENST00000560222 MAPKBP1O60336 1514 aa29.06■■■□□ 2.24
IPO4-212ENST00000560222 KDM6BO15054 1643 aa29.05■■■□□ 2.24
IPO4-212ENST00000560222 DIP2BQ9P265 1576 aa29.05■■■□□ 2.24
IPO4-212ENST00000560222 TTBK1Q5TCY1 1321 aaPredicted RBP29.01■■■□□ 2.23
IPO4-212ENST00000560222 TSPOAP1O95153 1857 aa29■■■□□ 2.23
IPO4-212ENST00000560222 ADCY10Q96PN6 1610 aa28.98■■■□□ 2.23
IPO4-212ENST00000560222 RUSC2Q8N2Y8 1516 aa28.97■■■□□ 2.23
IPO4-212ENST00000560222 KIAA0586Q9BVV6 1533 aa28.86■■■□□ 2.21
IPO4-212ENST00000560222 PTPRGP23470 1445 aa28.85■■■□□ 2.21
IPO4-212ENST00000560222 IGF1RP08069 1367 aa28.75■■■□□ 2.19
IPO4-212ENST00000560222 ADGRL1O94910 1474 aa28.72■■■□□ 2.19
IPO4-212ENST00000560222 ASXL2Q76L83 1435 aa28.7■■■□□ 2.19
IPO4-212ENST00000560222 CARMIL2Q6F5E8 1435 aa28.69■■■□□ 2.18
IPO4-212ENST00000560222 KIF27Q86VH2 1401 aa28.69■■■□□ 2.18
IPO4-212ENST00000560222 TNIKQ9UKE5 1360 aa28.68■■■□□ 2.18
IPO4-212ENST00000560222 PLB1Q6P1J6 1458 aa28.67■■■□□ 2.18
IPO4-212ENST00000560222 ABCC2Q92887 1545 aa28.67■■■□□ 2.18
IPO4-212ENST00000560222 CUL7Q14999 1698 aa28.59■■■□□ 2.17
IPO4-212ENST00000560222 CARMIL1Q5VZK9 1371 aa28.59■■■□□ 2.17
IPO4-212ENST00000560222 GLI2P10070 1586 aa28.58■■■□□ 2.17
IPO4-212ENST00000560222 COL17A1Q9UMD9 1497 aaPredicted RBP28.55■■■□□ 2.16
IPO4-212ENST00000560222 PPRC1Q5VV67 1664 aaKnown RBP28.54■■■□□ 2.16
IPO4-212ENST00000560222 UACAQ9BZF9 1416 aa28.53■■■□□ 2.16
IPO4-212ENST00000560222 HECW2Q9P2P5 1572 aa28.52■■■□□ 2.16
IPO4-212ENST00000560222 UHRF1BP1LA0JNW5 1464 aa28.49■■■□□ 2.15
IPO4-212ENST00000560222 TEX14Q8IWB6 1497 aa28.47■■■□□ 2.15
IPO4-212ENST00000560222 EPRSP07814 1512 aaKnown RBP28.47■■■□□ 2.15
IPO4-212ENST00000560222 IQGAP2Q13576 1575 aa28.45■■■□□ 2.14
IPO4-212ENST00000560222 MAP3K4Q9Y6R4 1608 aa28.38■■■□□ 2.13
IPO4-212ENST00000560222 KDM5BQ9UGL1 1544 aa28.38■■■□□ 2.13
IPO4-212ENST00000560222 DISP1Q96F81 1524 aa28.36■■■□□ 2.13
IPO4-212ENST00000560222 KCNH8Q96L42 1107 aa28.35■■■□□ 2.13
IPO4-212ENST00000560222 ZCCHC11Q5TAX3 1644 aaKnown RBP28.31■■■□□ 2.12
IPO4-212ENST00000560222 FBXO41Q8TF61 875 aa28.27■■■□□ 2.12
IPO4-212ENST00000560222 WDR7Q9Y4E6 1490 aa28.27■■■□□ 2.12
IPO4-212ENST00000560222 CD109Q6YHK3 1445 aa28.26■■■□□ 2.11
IPO4-212ENST00000560222 UGGT2Q9NYU1 1516 aa28.21■■■□□ 2.11
IPO4-212ENST00000560222 RAPGEF2Q9Y4G8 1499 aa28.18■■■□□ 2.1
IPO4-212ENST00000560222 KIAA0556O60303 1618 aa28.16■■■□□ 2.1
IPO4-212ENST00000560222 MAGI3Q5TCQ9 1506 aa28.14■■■□□ 2.1
IPO4-212ENST00000560222 ARID3CA6NKF2 412 aa28.08■■■□□ 2.09
IPO4-212ENST00000560222 KIF21BO75037 1637 aa28.07■■■□□ 2.08
IPO4-212ENST00000560222 CFAP43Q8NDM7 1665 aa28.07■■■□□ 2.08
IPO4-212ENST00000560222 FAM9AQ8IZU1 332 aaPredicted RBP28.06■■■□□ 2.08
IPO4-212ENST00000560222 GOLGA3Q08378 1498 aa28.01■■■□□ 2.07
IPO4-212ENST00000560222 ARID4BQ4LE39 1312 aaPredicted RBP28■■■□□ 2.07
IPO4-212ENST00000560222 PTPRMP28827 1452 aa27.96■■■□□ 2.07
IPO4-212ENST00000560222 RAPGEF3O95398 923 aa27.96■■■□□ 2.07
IPO4-212ENST00000560222 ABCA8O94911 1581 aa27.95■■■□□ 2.07
IPO4-212ENST00000560222 ARAP3Q8WWN8 1544 aa27.94■■■□□ 2.06
IPO4-212ENST00000560222 P3H3Q8IVL6 736 aa27.93■■■□□ 2.06
IPO4-212ENST00000560222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.88■■■□□ 2.05
IPO4-212ENST00000560222 HNRNPUL2Q1KMD3 747 aaKnown RBP27.88■■■□□ 2.05
IPO4-212ENST00000560222 PLPPR3Q6T4P5 718 aa27.87■■■□□ 2.05
IPO4-212ENST00000560222 PHLDB1Q86UU1 1377 aa27.86■■■□□ 2.05
IPO4-212ENST00000560222 CTTNBP2Q8WZ74 1663 aa27.86■■■□□ 2.05
IPO4-212ENST00000560222 ADAMTSL3P82987 1691 aa27.84■■■□□ 2.05
IPO4-212ENST00000560222 ATP10BO94823 1461 aa27.82■■■□□ 2.04
IPO4-212ENST00000560222 HSPA2P54652 639 aa27.78■■■□□ 2.04
IPO4-212ENST00000560222 PCF11O94913 1555 aaKnown RBP27.77■■■□□ 2.04
IPO4-212ENST00000560222 LMTK3Q96Q04 1460 aa27.74■■■□□ 2.03
IPO4-212ENST00000560222 MADDQ8WXG6 1647 aa27.73■■■□□ 2.03
IPO4-212ENST00000560222 NEO1Q92859 1461 aa27.72■■■□□ 2.03
IPO4-212ENST00000560222 ABCA9Q8IUA7 1624 aa27.71■■■□□ 2.03
IPO4-212ENST00000560222 BCORL1Q5H9F3 1711 aa27.71■■■□□ 2.03
IPO4-212ENST00000560222 CERKQ8TCT0 537 aa27.67■■■□□ 2.02
IPO4-212ENST00000560222 PRXQ9BXM0 1461 aa27.64■■■□□ 2.02
IPO4-212ENST00000560222 RANGAP1P46060 587 aaPredicted RBP27.64■■■□□ 2.02
IPO4-212ENST00000560222 RIMS1Q86UR5 1692 aaKnown RBP27.62■■■□□ 2.01
IPO4-212ENST00000560222 MLECQ14165 292 aa27.62■■■□□ 2.01
IPO4-212ENST00000560222 PLEKHD1A6NEE1 506 aa27.6■■■□□ 2.01
IPO4-212ENST00000560222 DENND4BO75064 1496 aaPredicted RBP27.59■■■□□ 2.01
IPO4-212ENST00000560222 FRMPD1Q5SYB0 1578 aa27.59■■■□□ 2.01
IPO4-212ENST00000560222 POGZQ7Z3K3 1410 aa27.58■■■□□ 2.01
IPO4-212ENST00000560222 RAPGEF6Q8TEU7 1601 aa27.54■■■□□ 2
IPO4-212ENST00000560222 AKNAQ7Z591 1439 aa27.53■■■□□ 2
IPO4-212ENST00000560222 DISP3Q9P2K9 1392 aa27.52■■■□□ 2
IPO4-212ENST00000560222 ARHGEF40Q8TER5 1519 aa27.51■■■□□ 2
IPO4-212ENST00000560222 FANCAO15360 1455 aa27.51■■□□□ 1.99
IPO4-212ENST00000560222 FHOD3Q2V2M9 1422 aa27.47■■□□□ 1.99
IPO4-212ENST00000560222 NUP153P49790 1475 aaKnown RBP27.46■■□□□ 1.99
IPO4-212ENST00000560222 ILDR2Q71H61 639 aa27.46■■□□□ 1.99
IPO4-212ENST00000560222 YEATS2Q9ULM3 1422 aa27.44■■□□□ 1.98
IPO4-212ENST00000560222 CSRNP3Q8WYN3 585 aa27.44■■□□□ 1.98
IPO4-212ENST00000560222 RICTORQ6R327 1708 aa27.43■■□□□ 1.98
IPO4-212ENST00000560222 SAMD9Q5K651 1589 aa27.42■■□□□ 1.98
IPO4-212ENST00000560222 ZFYVE16Q7Z3T8 1539 aa27.41■■□□□ 1.98
IPO4-212ENST00000560222 SOCS7O14512 581 aa27.41■■□□□ 1.98
IPO4-212ENST00000560222 CEBPAP49715 358 aaPredicted RBP27.38■■□□□ 1.97
IPO4-212ENST00000560222 DMRT2Q9Y5R5 561 aa27.38■■□□□ 1.97
IPO4-212ENST00000560222 EFCAB5A4FU69 1503 aa27.37■■□□□ 1.97
IPO4-212ENST00000560222 CFAP74Q9C0B2 1584 aa27.37■■□□□ 1.97
IPO4-212ENST00000560222 MAGI2Q86UL8 1455 aa27.34■■□□□ 1.97
IPO4-212ENST00000560222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.34■■□□□ 1.97
IPO4-212ENST00000560222 ZMYM4Q5VZL5 1548 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms