RNA–Protein interactions for RNA: ENST00000559744.1

APH1B-205, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1B, Length 456 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-205ENST00000559744 NCAPD3P42695 1498 aa9.07□□□□□ -0.96
APH1B-205ENST00000559744 MIER1Q8N108 512 aa9.05□□□□□ -0.96
APH1B-205ENST00000559744 SMARCA4P51532 1647 aa9.05□□□□□ -0.96
APH1B-205ENST00000559744 PLEKHG5O94827 1062 aa9.04□□□□□ -0.96
APH1B-205ENST00000559744 PLCD3Q8N3E9 789 aa9.04□□□□□ -0.96
APH1B-205ENST00000559744 ATAD2BQ9ULI0 1458 aa9.02□□□□□ -0.96
APH1B-205ENST00000559744 C19orf67A6NJJ6 358 aa9.01□□□□□ -0.97
APH1B-205ENST00000559744 MNX1P50219 401 aaPredicted RBP9.01□□□□□ -0.97
APH1B-205ENST00000559744 PEG3Q9GZU2 1588 aa9.01□□□□□ -0.97
APH1B-205ENST00000559744 HMGXB3Q12766 1538 aa9□□□□□ -0.97
APH1B-205ENST00000559744 NPM1P06748 294 aaKnown RBP eCLIP9□□□□□ -0.97
APH1B-205ENST00000559744 VASPP50552 380 aaPredicted RBP8.98□□□□□ -0.97
APH1B-205ENST00000559744 BAZ1BQ9UIG0 1483 aaKnown RBP8.97□□□□□ -0.97
APH1B-205ENST00000559744 CD44P16070 742 aaKnown RBP8.97□□□□□ -0.97
APH1B-205ENST00000559744 MROH2BQ7Z745 1585 aa8.97□□□□□ -0.97
APH1B-205ENST00000559744 EVX2Q03828 476 aa8.96□□□□□ -0.98
APH1B-205ENST00000559744 ZBTB47Q9UFB7 747 aaPredicted RBP8.95□□□□□ -0.98
APH1B-205ENST00000559744 SP7Q8TDD2 431 aaPredicted RBP8.94□□□□□ -0.98
APH1B-205ENST00000559744 RSF1Q96T23 1441 aaPredicted RBP8.92□□□□□ -0.98
APH1B-205ENST00000559744 PAK3O75914 559 aaPredicted RBP8.9□□□□□ -0.98
APH1B-205ENST00000559744 ZRANB1Q9UGI0 708 aa8.88□□□□□ -0.99
APH1B-205ENST00000559744 PLCB2Q00722 1185 aa8.87□□□□□ -0.99
APH1B-205ENST00000559744 KLHL34Q8N239 644 aa8.87□□□□□ -0.99
APH1B-205ENST00000559744 NUBP1P53384 320 aa8.84□□□□□ -0.99
APH1B-205ENST00000559744 RASEFQ8IZ41 740 aa8.84□□□□□ -0.99
APH1B-205ENST00000559744 ZNF579Q8NAF0 562 aaKnown RBP8.84□□□□□ -0.99
APH1B-205ENST00000559744 TSPYL2Q9H2G4 693 aaPredicted RBP8.84□□□□□ -0.99
APH1B-205ENST00000559744 WIZO95785 1651 aa8.84□□□□□ -0.99
APH1B-205ENST00000559744 HAP1P54257 671 aaPredicted RBP8.83□□□□□ -1
APH1B-205ENST00000559744 IFNLR1Q8IU57 520 aaPredicted RBP8.83□□□□□ -1
APH1B-205ENST00000559744 TOP2AP11388 1531 aaKnown RBP8.83□□□□□ -1
APH1B-205ENST00000559744 LAMC3Q9Y6N6 1575 aa8.81□□□□□ -1
APH1B-205ENST00000559744 PDS5BQ9NTI5 1447 aa8.8□□□□□ -1
APH1B-205ENST00000559744 GABBR2O75899 941 aa8.8□□□□□ -1
APH1B-205ENST00000559744 PRKCSHP14314 528 aaPredicted RBP8.8□□□□□ -1
APH1B-205ENST00000559744 CADPSQ9ULU8 1353 aa8.8□□□□□ -1
APH1B-205ENST00000559744 FAM212AQ96EL1 285 aa8.79□□□□□ -1
APH1B-205ENST00000559744 PHF12Q96QT6 1004 aa8.79□□□□□ -1
APH1B-205ENST00000559744 ERCC6Q03468 1493 aa8.78□□□□□ -1
APH1B-205ENST00000559744 CLCN6P51797 869 aa8.78□□□□□ -1
APH1B-205ENST00000559744 CCDC61Q9Y6R9 512 aa8.78□□□□□ -1
APH1B-205ENST00000559744 SPOCK2Q92563 424 aa8.76□□□□□ -1.01
APH1B-205ENST00000559744 DCAF8Q5TAQ9 597 aa8.74□□□□□ -1.01
APH1B-205ENST00000559744 CFTRP13569 1480 aa8.74□□□□□ -1.01
APH1B-205ENST00000559744 BCANQ96GW7 911 aa8.73□□□□□ -1.01
APH1B-205ENST00000559744 CUX2O14529 1486 aa8.71□□□□□ -1.01
APH1B-205ENST00000559744 GSE1Q14687 1217 aa8.71□□□□□ -1.02
APH1B-205ENST00000559744 CCDC88BA6NC98 1476 aa8.7□□□□□ -1.02
APH1B-205ENST00000559744 NESP48681 1621 aa8.7□□□□□ -1.02
APH1B-205ENST00000559744 SUPT5HO00267 1087 aaKnown RBP8.7□□□□□ -1.02
APH1B-205ENST00000559744 GALR2O43603 387 aaPredicted RBP8.7□□□□□ -1.02
APH1B-205ENST00000559744 KIF12Q96FN5 646 aa8.7□□□□□ -1.02
APH1B-205ENST00000559744 MS4A3Q96HJ5 214 aa8.69□□□□□ -1.02
APH1B-205ENST00000559744 MAP3K13O43283 966 aa8.67□□□□□ -1.02
APH1B-205ENST00000559744 TAOK2Q9UL54 1235 aa8.67□□□□□ -1.02
APH1B-205ENST00000559744 CIZ1Q9ULV3 898 aaPredicted RBP8.67□□□□□ -1.02
APH1B-205ENST00000559744 CEP164Q9UPV0 1460 aa8.67□□□□□ -1.02
APH1B-205ENST00000559744 FANCD2Q9BXW9 1451 aa8.66□□□□□ -1.02
APH1B-205ENST00000559744 PYGBP11216 843 aa8.65□□□□□ -1.02
APH1B-205ENST00000559744 MRC2Q9UBG0 1479 aa8.64□□□□□ -1.03
APH1B-205ENST00000559744 DCBLD2Q96PD2 775 aa8.64□□□□□ -1.03
APH1B-205ENST00000559744 PCDHB13Q9Y5F0 798 aa8.64□□□□□ -1.03
APH1B-205ENST00000559744 SGIP1Q9BQI5 828 aa8.63□□□□□ -1.03
APH1B-205ENST00000559744 ABCC8Q09428 1581 aa8.63□□□□□ -1.03
APH1B-205ENST00000559744 POTEIP0CG38 1075 aa8.61□□□□□ -1.03
APH1B-205ENST00000559744 WDR62O43379 1518 aa8.59□□□□□ -1.03
APH1B-205ENST00000559744 IFNL1Q8IU54 200 aa8.59□□□□□ -1.03
APH1B-205ENST00000559744 THOC2Q8NI27 1593 aaKnown RBP8.59□□□□□ -1.03
APH1B-205ENST00000559744 PRDM2Q13029 1718 aa8.59□□□□□ -1.03
APH1B-205ENST00000559744 KIF21AQ7Z4S6 1674 aa8.59□□□□□ -1.03
APH1B-205ENST00000559744 CHRM1P11229 460 aaPredicted RBP8.58□□□□□ -1.04
APH1B-205ENST00000559744 TPRNQ4KMQ1 711 aa8.58□□□□□ -1.04
APH1B-205ENST00000559744 VSIG10Q8N0Z9 540 aa8.58□□□□□ -1.04
APH1B-205ENST00000559744 TRPC6Q9Y210 931 aa8.57□□□□□ -1.04
APH1B-205ENST00000559744 TRIM41Q8WV44 630 aa8.56□□□□□ -1.04
APH1B-205ENST00000559744 ASTLQ6HA08 431 aaPredicted RBP8.55□□□□□ -1.04
APH1B-205ENST00000559744 ATMINO43313 823 aaPredicted RBP8.54□□□□□ -1.04
APH1B-205ENST00000559744 TIE1P35590 1138 aa8.54□□□□□ -1.04
APH1B-205ENST00000559744 ZNF467Q7Z7K2 595 aaPredicted RBP8.54□□□□□ -1.04
APH1B-205ENST00000559744 BMP2KQ9NSY1 1161 aaPredicted RBP8.54□□□□□ -1.04
APH1B-205ENST00000559744 PCDHB8Q9UN66 801 aa8.54□□□□□ -1.04
APH1B-205ENST00000559744 URB2Q14146 1524 aaKnown RBP8.52□□□□□ -1.05
APH1B-205ENST00000559744 DNMBPQ6XZF7 1577 aa8.52□□□□□ -1.05
APH1B-205ENST00000559744 IFT140Q96RY7 1462 aa8.51□□□□□ -1.05
APH1B-205ENST00000559744 TOPBP1Q92547 1522 aa8.51□□□□□ -1.05
APH1B-205ENST00000559744 ATN1P54259 1190 aaPredicted RBP8.51□□□□□ -1.05
APH1B-205ENST00000559744 PKD2Q13563 968 aa8.51□□□□□ -1.05
APH1B-205ENST00000559744 TTLL13PA6NNM8 815 aa8.5□□□□□ -1.05
APH1B-205ENST00000559744 PELP1Q8IZL8 1130 aaKnown RBP8.49□□□□□ -1.05
APH1B-205ENST00000559744 TMEM106CQ9BVX2 250 aa8.49□□□□□ -1.05
APH1B-205ENST00000559744 KDM2AQ9Y2K7 1162 aa8.49□□□□□ -1.05
APH1B-205ENST00000559744 ECM2O94769 699 aaPredicted RBP8.47□□□□□ -1.05
APH1B-205ENST00000559744 SLC39A7Q92504 469 aa8.46□□□□□ -1.06
APH1B-205ENST00000559744 CFAP44Q96MT7 982 aa8.46□□□□□ -1.06
APH1B-205ENST00000559744 TRIM35Q9UPQ4 493 aa8.46□□□□□ -1.06
APH1B-205ENST00000559744 PSEN1P49768 467 aa8.45□□□□□ -1.06
APH1B-205ENST00000559744 PDAP1Q13442 181 aaKnown RBP8.45□□□□□ -1.06
APH1B-205ENST00000559744 PAXIP1Q6ZW49 1069 aaPredicted RBP8.45□□□□□ -1.06
APH1B-205ENST00000559744 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.45□□□□□ -1.06
APH1B-205ENST00000559744 SOGA1O94964 1423 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms