RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 ABCC10Q5T3U5 1492 aa29.34■■■□□ 2.29
PSEN1-224ENST00000559361 RUSC2Q8N2Y8 1516 aa29.32■■■□□ 2.28
PSEN1-224ENST00000559361 FAM69CQ0P6D2 419 aa29.3■■■□□ 2.28
PSEN1-224ENST00000559361 MAPKBP1O60336 1514 aa29.29■■■□□ 2.28
PSEN1-224ENST00000559361 NPM1P06748 294 aaKnown RBP eCLIP29.25■■■□□ 2.27
PSEN1-224ENST00000559361 DIP2BQ9P265 1576 aa29.22■■■□□ 2.27
PSEN1-224ENST00000559361 ADCY10Q96PN6 1610 aa29.22■■■□□ 2.27
PSEN1-224ENST00000559361 KIAA0586Q9BVV6 1533 aa29.16■■■□□ 2.26
PSEN1-224ENST00000559361 IGF1RP08069 1367 aa29.12■■■□□ 2.25
PSEN1-224ENST00000559361 KDM4FA0A1W2PPD8 638 aa29.07■■■□□ 2.24
PSEN1-224ENST00000559361 KDM6BO15054 1643 aa29.06■■■□□ 2.24
PSEN1-224ENST00000559361 TSPOAP1O95153 1857 aa29.02■■■□□ 2.24
PSEN1-224ENST00000559361 CUL7Q14999 1698 aa29.02■■■□□ 2.24
PSEN1-224ENST00000559361 KIF27Q86VH2 1401 aa29.01■■■□□ 2.23
PSEN1-224ENST00000559361 PTPRGP23470 1445 aa28.96■■■□□ 2.23
PSEN1-224ENST00000559361 ABCC2Q92887 1545 aa28.89■■■□□ 2.21
PSEN1-224ENST00000559361 CARMIL1Q5VZK9 1371 aa28.88■■■□□ 2.21
PSEN1-224ENST00000559361 TNIKQ9UKE5 1360 aa28.88■■■□□ 2.21
PSEN1-224ENST00000559361 GLI2P10070 1586 aa28.84■■■□□ 2.21
PSEN1-224ENST00000559361 CARMIL2Q6F5E8 1435 aa28.84■■■□□ 2.21
PSEN1-224ENST00000559361 ASXL2Q76L83 1435 aa28.83■■■□□ 2.21
PSEN1-224ENST00000559361 PPRC1Q5VV67 1664 aaKnown RBP28.83■■■□□ 2.21
PSEN1-224ENST00000559361 PLB1Q6P1J6 1458 aa28.82■■■□□ 2.2
PSEN1-224ENST00000559361 UHRF1BP1LA0JNW5 1464 aa28.81■■■□□ 2.2
PSEN1-224ENST00000559361 TTBK1Q5TCY1 1321 aaPredicted RBP28.77■■■□□ 2.2
PSEN1-224ENST00000559361 IQGAP2Q13576 1575 aa28.76■■■□□ 2.19
PSEN1-224ENST00000559361 UACAQ9BZF9 1416 aa28.73■■■□□ 2.19
PSEN1-224ENST00000559361 DISP1Q96F81 1524 aa28.72■■■□□ 2.19
PSEN1-224ENST00000559361 COL17A1Q9UMD9 1497 aaPredicted RBP28.69■■■□□ 2.18
PSEN1-224ENST00000559361 KDM5BQ9UGL1 1544 aa28.68■■■□□ 2.18
PSEN1-224ENST00000559361 EPRSP07814 1512 aaKnown RBP28.66■■■□□ 2.18
PSEN1-224ENST00000559361 ADGRL1O94910 1474 aa28.66■■■□□ 2.18
PSEN1-224ENST00000559361 MAP3K4Q9Y6R4 1608 aa28.65■■■□□ 2.18
PSEN1-224ENST00000559361 ILDR1Q86SU0 546 aaPredicted RBP28.63■■■□□ 2.17
PSEN1-224ENST00000559361 UGGT2Q9NYU1 1516 aa28.61■■■□□ 2.17
PSEN1-224ENST00000559361 ZCCHC11Q5TAX3 1644 aaKnown RBP28.56■■■□□ 2.16
PSEN1-224ENST00000559361 TEX14Q8IWB6 1497 aa28.56■■■□□ 2.16
PSEN1-224ENST00000559361 RAPGEF2Q9Y4G8 1499 aa28.54■■■□□ 2.16
PSEN1-224ENST00000559361 KIAA0556O60303 1618 aa28.52■■■□□ 2.16
PSEN1-224ENST00000559361 WDR7Q9Y4E6 1490 aa28.46■■■□□ 2.15
PSEN1-224ENST00000559361 HECW2Q9P2P5 1572 aa28.41■■■□□ 2.14
PSEN1-224ENST00000559361 MAGI3Q5TCQ9 1506 aa28.38■■■□□ 2.13
PSEN1-224ENST00000559361 CD109Q6YHK3 1445 aa28.35■■■□□ 2.13
PSEN1-224ENST00000559361 CFAP43Q8NDM7 1665 aa28.34■■■□□ 2.13
PSEN1-224ENST00000559361 ABCA8O94911 1581 aa28.33■■■□□ 2.12
PSEN1-224ENST00000559361 CTTNBP2Q8WZ74 1663 aa28.31■■■□□ 2.12
PSEN1-224ENST00000559361 GOLGA3Q08378 1498 aa28.29■■■□□ 2.12
PSEN1-224ENST00000559361 KCNH8Q96L42 1107 aa28.26■■■□□ 2.11
PSEN1-224ENST00000559361 ARAP3Q8WWN8 1544 aa28.18■■■□□ 2.1
PSEN1-224ENST00000559361 PRXQ9BXM0 1461 aa28.17■■■□□ 2.1
PSEN1-224ENST00000559361 KIF21BO75037 1637 aa28.14■■■□□ 2.1
PSEN1-224ENST00000559361 CHIC1Q5VXU3 224 aa28.13■■■□□ 2.09
PSEN1-224ENST00000559361 ATP10BO94823 1461 aa28.1■■■□□ 2.09
PSEN1-224ENST00000559361 PHLDB1Q86UU1 1377 aa28.07■■■□□ 2.08
PSEN1-224ENST00000559361 ABCA9Q8IUA7 1624 aa28.03■■■□□ 2.08
PSEN1-224ENST00000559361 ADAMTSL3P82987 1691 aa28.02■■■□□ 2.08
PSEN1-224ENST00000559361 FAM9AQ8IZU1 332 aaPredicted RBP27.99■■■□□ 2.07
PSEN1-224ENST00000559361 PTPRMP28827 1452 aa27.99■■■□□ 2.07
PSEN1-224ENST00000559361 ARID3CA6NKF2 412 aa27.98■■■□□ 2.07
PSEN1-224ENST00000559361 P3H3Q8IVL6 736 aa27.97■■■□□ 2.07
PSEN1-224ENST00000559361 FBXO41Q8TF61 875 aa27.97■■■□□ 2.07
PSEN1-224ENST00000559361 NEO1Q92859 1461 aa27.95■■■□□ 2.07
PSEN1-224ENST00000559361 RAPGEF3O95398 923 aa27.95■■■□□ 2.06
PSEN1-224ENST00000559361 SAMD9Q5K651 1589 aa27.92■■■□□ 2.06
PSEN1-224ENST00000559361 BCORL1Q5H9F3 1711 aa27.89■■■□□ 2.05
PSEN1-224ENST00000559361 RAPGEF6Q8TEU7 1601 aa27.89■■■□□ 2.05
PSEN1-224ENST00000559361 FRMPD1Q5SYB0 1578 aa27.88■■■□□ 2.05
PSEN1-224ENST00000559361 MADDQ8WXG6 1647 aa27.81■■■□□ 2.04
PSEN1-224ENST00000559361 NUP153P49790 1475 aaKnown RBP27.81■■■□□ 2.04
PSEN1-224ENST00000559361 CSRNP3Q8WYN3 585 aa27.8■■■□□ 2.04
PSEN1-224ENST00000559361 EEA1Q15075 1411 aa27.8■■■□□ 2.04
PSEN1-224ENST00000559361 PCF11O94913 1555 aaKnown RBP27.8■■■□□ 2.04
PSEN1-224ENST00000559361 LMTK3Q96Q04 1460 aa27.78■■■□□ 2.04
PSEN1-224ENST00000559361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.77■■■□□ 2.04
PSEN1-224ENST00000559361 HNRNPUL2Q1KMD3 747 aaKnown RBP27.77■■■□□ 2.04
PSEN1-224ENST00000559361 ARID4BQ4LE39 1312 aaPredicted RBP27.76■■■□□ 2.03
PSEN1-224ENST00000559361 RICTORQ6R327 1708 aa27.75■■■□□ 2.03
PSEN1-224ENST00000559361 ARHGEF40Q8TER5 1519 aa27.74■■■□□ 2.03
PSEN1-224ENST00000559361 DENND4BO75064 1496 aaPredicted RBP27.73■■■□□ 2.03
PSEN1-224ENST00000559361 FHOD3Q2V2M9 1422 aa27.73■■■□□ 2.03
PSEN1-224ENST00000559361 AKNAQ7Z591 1439 aa27.7■■■□□ 2.03
PSEN1-224ENST00000559361 PLEKHD1A6NEE1 506 aa27.7■■■□□ 2.02
PSEN1-224ENST00000559361 RIMS1Q86UR5 1692 aaKnown RBP27.69■■■□□ 2.02
PSEN1-224ENST00000559361 FANCAO15360 1455 aa27.65■■■□□ 2.02
PSEN1-224ENST00000559361 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.65■■■□□ 2.02
PSEN1-224ENST00000559361 ZMYM4Q5VZL5 1548 aa27.64■■■□□ 2.02
PSEN1-224ENST00000559361 CFAP74Q9C0B2 1584 aa27.64■■■□□ 2.01
PSEN1-224ENST00000559361 SIGLEC1Q9BZZ2 1709 aa27.6■■■□□ 2.01
PSEN1-224ENST00000559361 POGZQ7Z3K3 1410 aa27.59■■■□□ 2.01
PSEN1-224ENST00000559361 MAGI2Q86UL8 1455 aa27.58■■■□□ 2.01
PSEN1-224ENST00000559361 TTC37Q6PGP7 1564 aa27.58■■■□□ 2.01
PSEN1-224ENST00000559361 HSPA2P54652 639 aa27.58■■■□□ 2.01
PSEN1-224ENST00000559361 YEATS2Q9ULM3 1422 aa27.58■■■□□ 2
PSEN1-224ENST00000559361 RANGAP1P46060 587 aaPredicted RBP27.56■■■□□ 2
PSEN1-224ENST00000559361 EFCAB5A4FU69 1503 aa27.56■■■□□ 2
PSEN1-224ENST00000559361 ZFYVE16Q7Z3T8 1539 aa27.56■■■□□ 2
PSEN1-224ENST00000559361 HECW1Q76N89 1606 aa27.52■■■□□ 2
PSEN1-224ENST00000559361 PLCH2O75038 1416 aa27.49■■□□□ 1.99
PSEN1-224ENST00000559361 SCAPERQ9BY12 1400 aa27.47■■□□□ 1.99
PSEN1-224ENST00000559361 FER1L4A9Z1Z3 1794 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms