RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 RUSC2Q8N2Y8 1516 aa26.62■■□□□ 1.85
RPL28-206ENST00000558752 KIF13AQ9H1H9 1805 aa26.61■■□□□ 1.85
RPL28-206ENST00000558752 KIF27Q86VH2 1401 aa26.6■■□□□ 1.85
RPL28-206ENST00000558752 FAM69CQ0P6D2 419 aa26.58■■□□□ 1.85
RPL28-206ENST00000558752 KIAA0586Q9BVV6 1533 aa26.55■■□□□ 1.84
RPL28-206ENST00000558752 IGF1RP08069 1367 aa26.54■■□□□ 1.84
RPL28-206ENST00000558752 CUL7Q14999 1698 aa26.53■■□□□ 1.84
RPL28-206ENST00000558752 ABCC10Q5T3U5 1492 aa26.5■■□□□ 1.83
RPL28-206ENST00000558752 MAPKBP1O60336 1514 aa26.49■■□□□ 1.83
RPL28-206ENST00000558752 KDM4FA0A1W2PPD8 638 aa26.48■■□□□ 1.83
RPL28-206ENST00000558752 ADCY10Q96PN6 1610 aa26.41■■□□□ 1.82
RPL28-206ENST00000558752 CARMIL1Q5VZK9 1371 aa26.4■■□□□ 1.82
RPL28-206ENST00000558752 CARMIL2Q6F5E8 1435 aa26.38■■□□□ 1.81
RPL28-206ENST00000558752 DIP2BQ9P265 1576 aa26.37■■□□□ 1.81
RPL28-206ENST00000558752 PTPRGP23470 1445 aa26.37■■□□□ 1.81
RPL28-206ENST00000558752 TNIKQ9UKE5 1360 aa26.31■■□□□ 1.8
RPL28-206ENST00000558752 TTBK1Q5TCY1 1321 aaPredicted RBP26.27■■□□□ 1.8
RPL28-206ENST00000558752 KDM6BO15054 1643 aa26.27■■□□□ 1.8
RPL28-206ENST00000558752 ILDR1Q86SU0 546 aaPredicted RBP26.25■■□□□ 1.79
RPL28-206ENST00000558752 IQGAP2Q13576 1575 aa26.24■■□□□ 1.79
RPL28-206ENST00000558752 ABCC2Q92887 1545 aa26.22■■□□□ 1.79
RPL28-206ENST00000558752 TSPOAP1O95153 1857 aa26.19■■□□□ 1.78
RPL28-206ENST00000558752 PLB1Q6P1J6 1458 aa26.19■■□□□ 1.78
RPL28-206ENST00000558752 UHRF1BP1LA0JNW5 1464 aa26.17■■□□□ 1.78
RPL28-206ENST00000558752 UACAQ9BZF9 1416 aa26.14■■□□□ 1.78
RPL28-206ENST00000558752 RAPGEF2Q9Y4G8 1499 aa26.14■■□□□ 1.78
RPL28-206ENST00000558752 ASXL2Q76L83 1435 aa26.14■■□□□ 1.77
RPL28-206ENST00000558752 GLI2P10070 1586 aa26.1■■□□□ 1.77
RPL28-206ENST00000558752 DISP1Q96F81 1524 aa26.08■■□□□ 1.77
RPL28-206ENST00000558752 UGGT2Q9NYU1 1516 aa26.07■■□□□ 1.76
RPL28-206ENST00000558752 COL17A1Q9UMD9 1497 aaPredicted RBP26.04■■□□□ 1.76
RPL28-206ENST00000558752 KDM5BQ9UGL1 1544 aa26.02■■□□□ 1.76
RPL28-206ENST00000558752 ADGRL1O94910 1474 aa26■■□□□ 1.75
RPL28-206ENST00000558752 PPRC1Q5VV67 1664 aaKnown RBP25.99■■□□□ 1.75
RPL28-206ENST00000558752 KIAA0556O60303 1618 aa25.98■■□□□ 1.75
RPL28-206ENST00000558752 TEX14Q8IWB6 1497 aa25.98■■□□□ 1.75
RPL28-206ENST00000558752 EPRSP07814 1512 aaKnown RBP25.97■■□□□ 1.75
RPL28-206ENST00000558752 GOLGA3Q08378 1498 aa25.94■■□□□ 1.74
RPL28-206ENST00000558752 FAM9AQ8IZU1 332 aaPredicted RBP25.94■■□□□ 1.74
RPL28-206ENST00000558752 ZCCHC11Q5TAX3 1644 aaKnown RBP25.92■■□□□ 1.74
RPL28-206ENST00000558752 MAP3K4Q9Y6R4 1608 aa25.9■■□□□ 1.74
RPL28-206ENST00000558752 CTTNBP2Q8WZ74 1663 aa25.88■■□□□ 1.73
RPL28-206ENST00000558752 WDR7Q9Y4E6 1490 aa25.86■■□□□ 1.73
RPL28-206ENST00000558752 HECW2Q9P2P5 1572 aa25.81■■□□□ 1.72
RPL28-206ENST00000558752 PRXQ9BXM0 1461 aa25.77■■□□□ 1.72
RPL28-206ENST00000558752 KCNH8Q96L42 1107 aa25.76■■□□□ 1.71
RPL28-206ENST00000558752 CD109Q6YHK3 1445 aa25.76■■□□□ 1.71
RPL28-206ENST00000558752 ABCA8O94911 1581 aa25.75■■□□□ 1.71
RPL28-206ENST00000558752 MAGI3Q5TCQ9 1506 aa25.73■■□□□ 1.71
RPL28-206ENST00000558752 CFAP43Q8NDM7 1665 aa25.73■■□□□ 1.71
RPL28-206ENST00000558752 P3H3Q8IVL6 736 aa25.6■■□□□ 1.69
RPL28-206ENST00000558752 CSRNP3Q8WYN3 585 aa25.6■■□□□ 1.69
RPL28-206ENST00000558752 PHLDB1Q86UU1 1377 aa25.58■■□□□ 1.69
RPL28-206ENST00000558752 ATP10BO94823 1461 aa25.55■■□□□ 1.68
RPL28-206ENST00000558752 ARID3CA6NKF2 412 aa25.54■■□□□ 1.68
RPL28-206ENST00000558752 ARAP3Q8WWN8 1544 aa25.53■■□□□ 1.68
RPL28-206ENST00000558752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.53■■□□□ 1.68
RPL28-206ENST00000558752 HNRNPUL2Q1KMD3 747 aaKnown RBP25.53■■□□□ 1.68
RPL28-206ENST00000558752 EEA1Q15075 1411 aa25.5■■□□□ 1.67
RPL28-206ENST00000558752 SAMD9Q5K651 1589 aa25.48■■□□□ 1.67
RPL28-206ENST00000558752 ABCA9Q8IUA7 1624 aa25.47■■□□□ 1.67
RPL28-206ENST00000558752 RAPGEF6Q8TEU7 1601 aa25.46■■□□□ 1.67
RPL28-206ENST00000558752 KIF21BO75037 1637 aa25.45■■□□□ 1.67
RPL28-206ENST00000558752 NEO1Q92859 1461 aa25.43■■□□□ 1.66
RPL28-206ENST00000558752 FBXO41Q8TF61 875 aa25.43■■□□□ 1.66
RPL28-206ENST00000558752 PLEKHD1A6NEE1 506 aa25.38■■□□□ 1.65
RPL28-206ENST00000558752 RANGAP1P46060 587 aaPredicted RBP25.37■■□□□ 1.65
RPL28-206ENST00000558752 RAPGEF3O95398 923 aa25.36■■□□□ 1.65
RPL28-206ENST00000558752 PTPRMP28827 1452 aa25.34■■□□□ 1.65
RPL28-206ENST00000558752 CHIC1Q5VXU3 224 aa25.34■■□□□ 1.65
RPL28-206ENST00000558752 NUP153P49790 1475 aaKnown RBP25.34■■□□□ 1.65
RPL28-206ENST00000558752 FHOD3Q2V2M9 1422 aa25.31■■□□□ 1.64
RPL28-206ENST00000558752 ARID4BQ4LE39 1312 aaPredicted RBP25.3■■□□□ 1.64
RPL28-206ENST00000558752 EFCAB5A4FU69 1503 aa25.27■■□□□ 1.64
RPL28-206ENST00000558752 ADAMTSL3P82987 1691 aa25.26■■□□□ 1.63
RPL28-206ENST00000558752 DENND4BO75064 1496 aaPredicted RBP25.24■■□□□ 1.63
RPL28-206ENST00000558752 CFAP74Q9C0B2 1584 aa25.23■■□□□ 1.63
RPL28-206ENST00000558752 AKNAQ7Z591 1439 aa25.21■■□□□ 1.63
RPL28-206ENST00000558752 FANCAO15360 1455 aa25.2■■□□□ 1.62
RPL28-206ENST00000558752 FRMPD1Q5SYB0 1578 aa25.18■■□□□ 1.62
RPL28-206ENST00000558752 BCORL1Q5H9F3 1711 aa25.18■■□□□ 1.62
RPL28-206ENST00000558752 LMTK3Q96Q04 1460 aa25.17■■□□□ 1.62
RPL28-206ENST00000558752 POGZQ7Z3K3 1410 aa25.16■■□□□ 1.62
RPL28-206ENST00000558752 MADDQ8WXG6 1647 aa25.15■■□□□ 1.62
RPL28-206ENST00000558752 HSPA2P54652 639 aa25.15■■□□□ 1.62
RPL28-206ENST00000558752 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.15■■□□□ 1.62
RPL28-206ENST00000558752 ARHGEF40Q8TER5 1519 aa25.15■■□□□ 1.62
RPL28-206ENST00000558752 PCF11O94913 1555 aaKnown RBP25.14■■□□□ 1.62
RPL28-206ENST00000558752 UBTFP17480 764 aaKnown RBP25.13■■□□□ 1.61
RPL28-206ENST00000558752 PLPPR3Q6T4P5 718 aa25.13■■□□□ 1.61
RPL28-206ENST00000558752 RICTORQ6R327 1708 aa25.12■■□□□ 1.61
RPL28-206ENST00000558752 CDK11AQ9UQ88 783 aaPredicted RBP25.12■■□□□ 1.61
RPL28-206ENST00000558752 FMN1Q68DA7 1419 aa25.11■■□□□ 1.61
RPL28-206ENST00000558752 MAGI2Q86UL8 1455 aa25.1■■□□□ 1.61
RPL28-206ENST00000558752 ATP1B4Q9UN42 357 aaPredicted RBP25.09■■□□□ 1.61
RPL28-206ENST00000558752 ZMYM4Q5VZL5 1548 aa25.07■■□□□ 1.6
RPL28-206ENST00000558752 TTC37Q6PGP7 1564 aa25.07■■□□□ 1.6
RPL28-206ENST00000558752 ZFYVE16Q7Z3T8 1539 aa25.07■■□□□ 1.6
RPL28-206ENST00000558752 PLCH2O75038 1416 aa25.06■■□□□ 1.6
RPL28-206ENST00000558752 CDK13Q14004 1512 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms