RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 TPRNQ4KMQ1 711 aa19.07■□□□□ 0.64
MARK3-213ENST00000558611 SCRIBQ14160 1630 aa19.04■□□□□ 0.64
MARK3-213ENST00000558611 TRIM41Q8WV44 630 aa19.04■□□□□ 0.64
MARK3-213ENST00000558611 TSHZ2Q9NRE2 1034 aa19.04■□□□□ 0.64
MARK3-213ENST00000558611 CIZ1Q9ULV3 898 aaPredicted RBP19.04■□□□□ 0.64
MARK3-213ENST00000558611 CHGAP10645 457 aaKnown RBP19.03■□□□□ 0.64
MARK3-213ENST00000558611 DNAJC5Q9H3Z4 198 aa18.9■□□□□ 0.62
MARK3-213ENST00000558611 HS6ST3Q8IZP7 471 aa18.89■□□□□ 0.61
MARK3-213ENST00000558611 SHROOM4Q9ULL8 1493 aa18.86■□□□□ 0.61
MARK3-213ENST00000558611 GSE1Q14687 1217 aa18.8■□□□□ 0.6
MARK3-213ENST00000558611 NBR1Q14596 966 aa18.75■□□□□ 0.59
MARK3-213ENST00000558611 RNF25Q96BH1 459 aaPredicted RBP18.7■□□□□ 0.58
MARK3-213ENST00000558611 NUBP1P53384 320 aa18.63■□□□□ 0.57
MARK3-213ENST00000558611 RIOK3O14730 519 aaKnown RBP18.6■□□□□ 0.57
MARK3-213ENST00000558611 NKX1-1Q15270 411 aaPredicted RBP18.56■□□□□ 0.56
MARK3-213ENST00000558611 EIF4G1Q04637 1599 aaKnown RBP18.55■□□□□ 0.56
MARK3-213ENST00000558611 GTPBP6O43824 516 aaPredicted RBP18.54■□□□□ 0.56
MARK3-213ENST00000558611 CACNB1Q02641 598 aaPredicted RBP18.54■□□□□ 0.56
MARK3-213ENST00000558611 DCAF8Q5TAQ9 597 aa18.54■□□□□ 0.56
MARK3-213ENST00000558611 CC2D2AQ9P2K1 1620 aa18.5■□□□□ 0.55
MARK3-213ENST00000558611 VGFO15240 615 aaPredicted RBP18.48■□□□□ 0.55
MARK3-213ENST00000558611 FAM212AQ96EL1 285 aa18.46■□□□□ 0.55
MARK3-213ENST00000558611 STK25O00506 426 aa18.44■□□□□ 0.54
MARK3-213ENST00000558611 CHRM1P11229 460 aaPredicted RBP18.44■□□□□ 0.54
MARK3-213ENST00000558611 SPDYE1Q8NFV5 336 aaPredicted RBP18.44■□□□□ 0.54
MARK3-213ENST00000558611 SGIP1Q9BQI5 828 aa18.42■□□□□ 0.54
MARK3-213ENST00000558611 RYDENQ9NUL5 291 aaKnown RBP18.38■□□□□ 0.53
MARK3-213ENST00000558611 CREBZFQ9NS37 354 aa18.34■□□□□ 0.53
MARK3-213ENST00000558611 MNX1P50219 401 aaPredicted RBP18.33■□□□□ 0.52
MARK3-213ENST00000558611 CECR2Q9BXF3 1484 aa18.31■□□□□ 0.52
MARK3-213ENST00000558611 AKT1S1Q96B36 256 aa18.3■□□□□ 0.52
MARK3-213ENST00000558611 PRR29P0C7W0 189 aa18.28■□□□□ 0.52
MARK3-213ENST00000558611 BCL11BQ9C0K0 894 aaPredicted RBP18.26■□□□□ 0.51
MARK3-213ENST00000558611 STK24Q9Y6E0 443 aa18.26■□□□□ 0.51
MARK3-213ENST00000558611 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.25■□□□□ 0.51
MARK3-213ENST00000558611 ZFP91Q96JP5 570 aaPredicted RBP18.25■□□□□ 0.51
MARK3-213ENST00000558611 RBM42Q9BTD8 480 aaKnown RBP18.25■□□□□ 0.51
MARK3-213ENST00000558611 RASEFQ8IZ41 740 aa18.23■□□□□ 0.51
MARK3-213ENST00000558611 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
MARK3-213ENST00000558611 CLEC11AQ9Y240 323 aa18.22■□□□□ 0.51
MARK3-213ENST00000558611 P3H3Q8IVL6 736 aa18.17■□□□□ 0.5
MARK3-213ENST00000558611 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
MARK3-213ENST00000558611 PYGBP11216 843 aa18.11■□□□□ 0.49
MARK3-213ENST00000558611 GTF3C3Q9Y5Q9 886 aa18.09■□□□□ 0.49
MARK3-213ENST00000558611 REM2Q8IYK8 340 aaPredicted RBP18.08■□□□□ 0.48
MARK3-213ENST00000558611 SMARCA2P51531 1590 aa18.07■□□□□ 0.48
MARK3-213ENST00000558611 TIMELESSQ9UNS1 1208 aa18.06■□□□□ 0.48
MARK3-213ENST00000558611 ATAD2BQ9ULI0 1458 aa18.05■□□□□ 0.48
MARK3-213ENST00000558611 PEG3Q9GZU2 1588 aa18.04■□□□□ 0.48
MARK3-213ENST00000558611 ERICH6Q7L0X2 663 aa18.04■□□□□ 0.48
MARK3-213ENST00000558611 NCAPD3P42695 1498 aa18.03■□□□□ 0.48
MARK3-213ENST00000558611 MROH2BQ7Z745 1585 aa18.03■□□□□ 0.48
MARK3-213ENST00000558611 HMGXB3Q12766 1538 aa18.03■□□□□ 0.48
MARK3-213ENST00000558611 TULP1O00294 542 aaPredicted RBP18.02■□□□□ 0.48
MARK3-213ENST00000558611 TMEM132AQ24JP5 1023 aa18.01■□□□□ 0.47
MARK3-213ENST00000558611 WDR70Q9NW82 654 aa17.98■□□□□ 0.47
MARK3-213ENST00000558611 ZNF467Q7Z7K2 595 aaPredicted RBP17.97■□□□□ 0.47
MARK3-213ENST00000558611 BAZ1BQ9UIG0 1483 aaKnown RBP17.92■□□□□ 0.46
MARK3-213ENST00000558611 KCNV2Q8TDN2 545 aa17.91■□□□□ 0.46
MARK3-213ENST00000558611 WIZO95785 1651 aa17.9■□□□□ 0.46
MARK3-213ENST00000558611 CADPS2Q86UW7 1296 aa17.89■□□□□ 0.45
MARK3-213ENST00000558611 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.88■□□□□ 0.45
MARK3-213ENST00000558611 PDAP1Q13442 181 aaKnown RBP17.87■□□□□ 0.45
MARK3-213ENST00000558611 LMOD2Q6P5Q4 547 aa17.86■□□□□ 0.45
MARK3-213ENST00000558611 PITPNM1O00562 1244 aa17.84■□□□□ 0.45
MARK3-213ENST00000558611 TSPYL2Q9H2G4 693 aaPredicted RBP17.77■□□□□ 0.44
MARK3-213ENST00000558611 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
MARK3-213ENST00000558611 MFRPQ9BY79 579 aa17.75■□□□□ 0.43
MARK3-213ENST00000558611 ARHGEF1Q92888 912 aaKnown RBP17.73■□□□□ 0.43
MARK3-213ENST00000558611 ZNF579Q8NAF0 562 aaKnown RBP17.71■□□□□ 0.43
MARK3-213ENST00000558611 PCDHB8Q9UN66 801 aa17.71■□□□□ 0.43
MARK3-213ENST00000558611 PCDHB13Q9Y5F0 798 aa17.71■□□□□ 0.43
MARK3-213ENST00000558611 PSEN1P49768 467 aa17.7■□□□□ 0.42
MARK3-213ENST00000558611 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
MARK3-213ENST00000558611 FARP1Q9Y4F1 1045 aaPredicted RBP17.65■□□□□ 0.42
MARK3-213ENST00000558611 LAMC3Q9Y6N6 1575 aa17.65■□□□□ 0.42
MARK3-213ENST00000558611 CCDC61Q9Y6R9 512 aa17.64■□□□□ 0.41
MARK3-213ENST00000558611 NESP48681 1621 aa17.63■□□□□ 0.41
MARK3-213ENST00000558611 CHADLQ6NUI6 762 aa17.63■□□□□ 0.41
MARK3-213ENST00000558611 ARXQ96QS3 562 aa17.63■□□□□ 0.41
MARK3-213ENST00000558611 E2F4Q16254 413 aa17.62■□□□□ 0.41
MARK3-213ENST00000558611 BRPF1P55201 1214 aaPredicted RBP17.59■□□□□ 0.41
MARK3-213ENST00000558611 NLRP6P59044 892 aa17.58■□□□□ 0.4
MARK3-213ENST00000558611 ZC3H15Q8WU90 426 aaKnown RBP17.58■□□□□ 0.4
MARK3-213ENST00000558611 SOX12O15370 315 aa17.57■□□□□ 0.4
MARK3-213ENST00000558611 KIF21AQ7Z4S6 1674 aa17.57■□□□□ 0.4
MARK3-213ENST00000558611 ERCC6Q03468 1493 aa17.56■□□□□ 0.4
MARK3-213ENST00000558611 PPP1R37O75864 691 aa17.56■□□□□ 0.4
MARK3-213ENST00000558611 C14orf37Q86TY3 774 aa17.56■□□□□ 0.4
MARK3-213ENST00000558611 FBXO22Q8NEZ5 403 aa17.56■□□□□ 0.4
MARK3-213ENST00000558611 TESPA1A2RU30 521 aaPredicted RBP17.54■□□□□ 0.4
MARK3-213ENST00000558611 PRDM2Q13029 1718 aa17.52■□□□□ 0.4
MARK3-213ENST00000558611 EFCAB3Q8N7B9 438 aa17.51■□□□□ 0.39
MARK3-213ENST00000558611 SEMA3EO15041 775 aa17.48■□□□□ 0.39
MARK3-213ENST00000558611 CADPSQ9ULU8 1353 aa17.48■□□□□ 0.39
MARK3-213ENST00000558611 THOC2Q8NI27 1593 aaKnown RBP17.48■□□□□ 0.39
MARK3-213ENST00000558611 IFNL1Q8IU54 200 aa17.47■□□□□ 0.39
MARK3-213ENST00000558611 PAK3O75914 559 aaPredicted RBP17.45■□□□□ 0.38
MARK3-213ENST00000558611 CABP2Q9NPB3 220 aa17.45■□□□□ 0.38
MARK3-213ENST00000558611 PHF8Q9UPP1 1060 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms