RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
TRPM1-206ENST00000558212 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
TRPM1-206ENST00000558212 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
TRPM1-206ENST00000558212 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
TRPM1-206ENST00000558212 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
TRPM1-206ENST00000558212 SMARCA4P51532 1647 aa13.02□□□□□ -0.33
TRPM1-206ENST00000558212 ECM2O94769 699 aaPredicted RBP13.01□□□□□ -0.33
TRPM1-206ENST00000558212 LAMC3Q9Y6N6 1575 aa13.01□□□□□ -0.33
TRPM1-206ENST00000558212 BAZ1BQ9UIG0 1483 aaKnown RBP12.98□□□□□ -0.33
TRPM1-206ENST00000558212 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
TRPM1-206ENST00000558212 KIF21AQ7Z4S6 1674 aa12.95□□□□□ -0.34
TRPM1-206ENST00000558212 MNX1P50219 401 aaPredicted RBP12.94□□□□□ -0.34
TRPM1-206ENST00000558212 CREBZFQ9NS37 354 aa12.94□□□□□ -0.34
TRPM1-206ENST00000558212 PDS5BQ9NTI5 1447 aa12.94□□□□□ -0.34
TRPM1-206ENST00000558212 RGL2O15211 777 aa12.92□□□□□ -0.34
TRPM1-206ENST00000558212 PRR29P0C7W0 189 aa12.92□□□□□ -0.34
TRPM1-206ENST00000558212 NUBP1P53384 320 aa12.92□□□□□ -0.34
TRPM1-206ENST00000558212 PEG3Q9GZU2 1588 aa12.92□□□□□ -0.34
TRPM1-206ENST00000558212 CLEC11AQ9Y240 323 aa12.92□□□□□ -0.34
TRPM1-206ENST00000558212 BAZ1AQ9NRL2 1556 aaPredicted RBP12.9□□□□□ -0.34
TRPM1-206ENST00000558212 PITPNM1O00562 1244 aa12.89□□□□□ -0.35
TRPM1-206ENST00000558212 CIZ1Q9ULV3 898 aaPredicted RBP12.87□□□□□ -0.35
TRPM1-206ENST00000558212 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
TRPM1-206ENST00000558212 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRPM1-206ENST00000558212 WDR62O43379 1518 aa12.84□□□□□ -0.35
TRPM1-206ENST00000558212 GSE1Q14687 1217 aa12.84□□□□□ -0.35
TRPM1-206ENST00000558212 BBXQ8WY36 941 aaPredicted RBP12.82□□□□□ -0.36
TRPM1-206ENST00000558212 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
TRPM1-206ENST00000558212 RNF25Q96BH1 459 aaPredicted RBP12.77□□□□□ -0.37
TRPM1-206ENST00000558212 MROH2BQ7Z745 1585 aa12.74□□□□□ -0.37
TRPM1-206ENST00000558212 FAM212AQ96EL1 285 aa12.73□□□□□ -0.37
TRPM1-206ENST00000558212 RASEFQ8IZ41 740 aa12.72□□□□□ -0.37
TRPM1-206ENST00000558212 CEP164Q9UPV0 1460 aa12.72□□□□□ -0.37
TRPM1-206ENST00000558212 DCAF8Q5TAQ9 597 aa12.7□□□□□ -0.38
TRPM1-206ENST00000558212 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.7□□□□□ -0.38
TRPM1-206ENST00000558212 CHRM1P11229 460 aaPredicted RBP12.69□□□□□ -0.38
TRPM1-206ENST00000558212 HS6ST3Q8IZP7 471 aa12.68□□□□□ -0.38
TRPM1-206ENST00000558212 HAP1P54257 671 aaPredicted RBP12.67□□□□□ -0.38
TRPM1-206ENST00000558212 RIMBP3CA6NJZ7 1639 aa12.66□□□□□ -0.38
TRPM1-206ENST00000558212 RIMBP3BA6NNM3 1639 aa12.66□□□□□ -0.38
TRPM1-206ENST00000558212 RIMBP3Q9UFD9 1639 aa12.66□□□□□ -0.38
TRPM1-206ENST00000558212 FANCD2Q9BXW9 1451 aa12.65□□□□□ -0.38
TRPM1-206ENST00000558212 CHGAP10645 457 aaKnown RBP12.65□□□□□ -0.38
TRPM1-206ENST00000558212 RIOK3O14730 519 aaKnown RBP12.63□□□□□ -0.39
TRPM1-206ENST00000558212 CHADLQ6NUI6 762 aa12.61□□□□□ -0.39
TRPM1-206ENST00000558212 FXR2P51116 673 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRPM1-206ENST00000558212 PAXIP1Q6ZW49 1069 aaPredicted RBP12.6□□□□□ -0.39
TRPM1-206ENST00000558212 VSIG10Q8N0Z9 540 aa12.59□□□□□ -0.39
TRPM1-206ENST00000558212 FARP1Q9Y4F1 1045 aaPredicted RBP12.59□□□□□ -0.39
TRPM1-206ENST00000558212 CFTRP13569 1480 aa12.59□□□□□ -0.39
TRPM1-206ENST00000558212 ARHGEF11O15085 1522 aa12.58□□□□□ -0.4
TRPM1-206ENST00000558212 SGIP1Q9BQI5 828 aa12.58□□□□□ -0.4
TRPM1-206ENST00000558212 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
TRPM1-206ENST00000558212 SPRYD3Q8NCJ5 442 aa12.57□□□□□ -0.4
TRPM1-206ENST00000558212 TAOK2Q9UL54 1235 aa12.57□□□□□ -0.4
TRPM1-206ENST00000558212 WIZO95785 1651 aa12.56□□□□□ -0.4
TRPM1-206ENST00000558212 VGFO15240 615 aaPredicted RBP12.55□□□□□ -0.4
TRPM1-206ENST00000558212 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
TRPM1-206ENST00000558212 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
TRPM1-206ENST00000558212 PYGBP11216 843 aa12.52□□□□□ -0.41
TRPM1-206ENST00000558212 NKX1-1Q15270 411 aaPredicted RBP12.5□□□□□ -0.41
TRPM1-206ENST00000558212 IFT140Q96RY7 1462 aa12.49□□□□□ -0.41
TRPM1-206ENST00000558212 KDM2AQ9Y2K7 1162 aa12.49□□□□□ -0.41
TRPM1-206ENST00000558212 CHRDL2Q6WN34 429 aa12.48□□□□□ -0.41
TRPM1-206ENST00000558212 CYB5RLQ6IPT4 315 aa12.47□□□□□ -0.41
TRPM1-206ENST00000558212 ZNF608Q9ULD9 1512 aaPredicted RBP12.47□□□□□ -0.41
TRPM1-206ENST00000558212 CCDC61Q9Y6R9 512 aa12.46□□□□□ -0.41
TRPM1-206ENST00000558212 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.45□□□□□ -0.42
TRPM1-206ENST00000558212 STK25O00506 426 aa12.45□□□□□ -0.42
TRPM1-206ENST00000558212 PIP4P2Q8N4L2 257 aa12.45□□□□□ -0.42
TRPM1-206ENST00000558212 ZFP91Q96JP5 570 aaPredicted RBP12.45□□□□□ -0.42
TRPM1-206ENST00000558212 PRDM2Q13029 1718 aa12.44□□□□□ -0.42
TRPM1-206ENST00000558212 ARAP1Q96P48 1450 aa12.43□□□□□ -0.42
TRPM1-206ENST00000558212 TSPYL2Q9H2G4 693 aaPredicted RBP12.43□□□□□ -0.42
TRPM1-206ENST00000558212 TSHZ2Q9NRE2 1034 aa12.43□□□□□ -0.42
TRPM1-206ENST00000558212 TOP2AP11388 1531 aaKnown RBP12.42□□□□□ -0.42
TRPM1-206ENST00000558212 GTPBP6O43824 516 aaPredicted RBP12.41□□□□□ -0.42
TRPM1-206ENST00000558212 EIF4G3O43432 1585 aaKnown RBP12.4□□□□□ -0.42
TRPM1-206ENST00000558212 RSF1Q96T23 1441 aaPredicted RBP12.4□□□□□ -0.42
TRPM1-206ENST00000558212 ZNF467Q7Z7K2 595 aaPredicted RBP12.4□□□□□ -0.42
TRPM1-206ENST00000558212 BCL11BQ9C0K0 894 aaPredicted RBP12.4□□□□□ -0.42
TRPM1-206ENST00000558212 TOPBP1Q92547 1522 aa12.37□□□□□ -0.43
TRPM1-206ENST00000558212 CHD1O14646 1710 aa12.37□□□□□ -0.43
TRPM1-206ENST00000558212 STK24Q9Y6E0 443 aa12.36□□□□□ -0.43
TRPM1-206ENST00000558212 ABCC8Q09428 1581 aa12.35□□□□□ -0.43
TRPM1-206ENST00000558212 ZNF579Q8NAF0 562 aaKnown RBP12.34□□□□□ -0.43
TRPM1-206ENST00000558212 PDAP1Q13442 181 aaKnown RBP12.32□□□□□ -0.44
TRPM1-206ENST00000558212 BCANQ96GW7 911 aa12.32□□□□□ -0.44
TRPM1-206ENST00000558212 DNMBPQ6XZF7 1577 aa12.3□□□□□ -0.44
TRPM1-206ENST00000558212 TARBP1Q13395 1621 aaKnown RBP12.3□□□□□ -0.44
TRPM1-206ENST00000558212 AQRO60306 1485 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRPM1-206ENST00000558212 PCDHB8Q9UN66 801 aa12.3□□□□□ -0.44
TRPM1-206ENST00000558212 PCDHB13Q9Y5F0 798 aa12.3□□□□□ -0.44
TRPM1-206ENST00000558212 RYDENQ9NUL5 291 aaKnown RBP12.29□□□□□ -0.44
TRPM1-206ENST00000558212 PAK3O75914 559 aaPredicted RBP12.28□□□□□ -0.44
TRPM1-206ENST00000558212 KIF12Q96FN5 646 aa12.28□□□□□ -0.44
TRPM1-206ENST00000558212 IFNL1Q8IU54 200 aa12.25□□□□□ -0.45
TRPM1-206ENST00000558212 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
TRPM1-206ENST00000558212 CLASP1Q7Z460 1538 aa12.25□□□□□ -0.45
TRPM1-206ENST00000558212 MAP3K13O43283 966 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms