RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SLC24A1O60721 1099 aa4.93□□□□□ -1.62
ATXN3-248ENST00000558190 CANXP27824 592 aaKnown RBP4.92□□□□□ -1.62
ATXN3-248ENST00000558190 PTMAP06454 111 aaKnown RBP4.92□□□□□ -1.62
ATXN3-248ENST00000558190 DNTTIP2Q5QJE6 756 aaKnown RBP4.92□□□□□ -1.62
ATXN3-248ENST00000558190 GZF1Q9H116 711 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-248ENST00000558190 PNNQ9H307 717 aaKnown RBP4.91□□□□□ -1.62
ATXN3-248ENST00000558190 TPRNQ4KMQ1 711 aa4.91□□□□□ -1.62
ATXN3-248ENST00000558190 IPO9Q96P70 1041 aaKnown RBP4.91□□□□□ -1.62
ATXN3-248ENST00000558190 PODXL2Q9NZ53 605 aa4.9□□□□□ -1.63
ATXN3-248ENST00000558190 A0A0U1RQG5 324 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-248ENST00000558190 SLC4A3P48751 1232 aa4.89□□□□□ -1.63
ATXN3-248ENST00000558190 MRS2Q9HD23 443 aa4.89□□□□□ -1.63
ATXN3-248ENST00000558190 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-248ENST00000558190 L1TD1Q5T7N2 865 aaKnown RBP4.88□□□□□ -1.63
ATXN3-248ENST00000558190 ZBTB7CA1YPR0 619 aa4.86□□□□□ -1.63
ATXN3-248ENST00000558190 GSE1Q14687 1217 aa4.86□□□□□ -1.63
ATXN3-248ENST00000558190 KDM2AQ9Y2K7 1162 aa4.85□□□□□ -1.63
ATXN3-248ENST00000558190 PLCB2Q00722 1185 aa4.84□□□□□ -1.63
ATXN3-248ENST00000558190 PTMSP20962 102 aa4.84□□□□□ -1.63
ATXN3-248ENST00000558190 KCNH8Q96L42 1107 aa4.84□□□□□ -1.64
ATXN3-248ENST00000558190 GOLGA6L22H0YM25 854 aa4.83□□□□□ -1.64
ATXN3-248ENST00000558190 CDK11BP21127 795 aaKnown RBP4.83□□□□□ -1.64
ATXN3-248ENST00000558190 ARID3AQ99856 593 aa4.83□□□□□ -1.64
ATXN3-248ENST00000558190 ZMYND15Q9H091 742 aa4.83□□□□□ -1.64
ATXN3-248ENST00000558190 PKNOX2Q96KN3 472 aa4.82□□□□□ -1.64
ATXN3-248ENST00000558190 GOLGA6L3A6NEY3 463 aa4.82□□□□□ -1.64
ATXN3-248ENST00000558190 FAM13BQ9NYF5 915 aa4.82□□□□□ -1.64
ATXN3-248ENST00000558190 RGS3P49796 1198 aa4.82□□□□□ -1.64
ATXN3-248ENST00000558190 USP35Q9P2H5 1018 aa4.82□□□□□ -1.64
ATXN3-248ENST00000558190 TCERG1O14776 1098 aaKnown RBP4.81□□□□□ -1.64
ATXN3-248ENST00000558190 DRC7Q8IY82 874 aa4.81□□□□□ -1.64
ATXN3-248ENST00000558190 P3H3Q8IVL6 736 aa4.81□□□□□ -1.64
ATXN3-248ENST00000558190 FAM43AQ8N2R8 423 aa4.81□□□□□ -1.64
ATXN3-248ENST00000558190 PDE4AP27815 886 aa4.81□□□□□ -1.64
ATXN3-248ENST00000558190 APPP05067 770 aa4.8□□□□□ -1.64
ATXN3-248ENST00000558190 MYH16Q9H6N6 1097 aa4.8□□□□□ -1.64
ATXN3-248ENST00000558190 RBM10P98175 930 aaKnown RBP4.8□□□□□ -1.64
ATXN3-248ENST00000558190 SIN3AQ96ST3 1273 aa4.79□□□□□ -1.64
ATXN3-248ENST00000558190 BRPF3Q9ULD4 1205 aa4.79□□□□□ -1.64
ATXN3-248ENST00000558190 IL27Q8NEV9 243 aa4.79□□□□□ -1.64
ATXN3-248ENST00000558190 KIAA2012Q0VF49 1180 aa4.78□□□□□ -1.64
ATXN3-248ENST00000558190 CALD1Q05682 793 aaKnown RBP4.77□□□□□ -1.65
ATXN3-248ENST00000558190 WDR43Q15061 677 aaKnown RBP eCLIP4.77□□□□□ -1.65
ATXN3-248ENST00000558190 MSNP26038 577 aaKnown RBP4.77□□□□□ -1.65
ATXN3-248ENST00000558190 FANCIQ9NVI1 1328 aa4.76□□□□□ -1.65
ATXN3-248ENST00000558190 CCER2I3L3R5 266 aa4.76□□□□□ -1.65
ATXN3-248ENST00000558190 ZNF771Q7L3S4 317 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-248ENST00000558190 FRAT1Q92837 279 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-248ENST00000558190 PDE4CQ08493 712 aa4.75□□□□□ -1.65
ATXN3-248ENST00000558190 MSH5O43196 834 aa4.75□□□□□ -1.65
ATXN3-248ENST00000558190 UBE2Q2Q8WVN8 375 aa4.75□□□□□ -1.65
ATXN3-248ENST00000558190 NEUROD2Q15784 382 aa4.75□□□□□ -1.65
ATXN3-248ENST00000558190 PAK3O75914 559 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-248ENST00000558190 RWDD1Q9H446 243 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-248ENST00000558190 CHAF1AQ13111 956 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-248ENST00000558190 HSP90AB1P08238 724 aaKnown RBP4.74□□□□□ -1.65
ATXN3-248ENST00000558190 RCAN3Q9UKA8 241 aa4.74□□□□□ -1.65
ATXN3-248ENST00000558190 EIF4G2P78344 907 aaKnown RBP eCLIP4.74□□□□□ -1.65
ATXN3-248ENST00000558190 FOXD4L1Q9NU39 408 aa4.74□□□□□ -1.65
ATXN3-248ENST00000558190 TULP1O00294 542 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-248ENST00000558190 GOLGA6L4A6NEF3 574 aa4.74□□□□□ -1.65
ATXN3-248ENST00000558190 SKOR2Q2VWA4 1001 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-248ENST00000558190 ZRSR1Q15695 479 aaKnown RBP4.73□□□□□ -1.65
ATXN3-248ENST00000558190 SLKQ9H2G2 1235 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-248ENST00000558190 CHIC2Q9UKJ5 165 aa4.73□□□□□ -1.65
ATXN3-248ENST00000558190 R3HCC1Q9Y3T6 440 aaKnown RBP4.72□□□□□ -1.65
ATXN3-248ENST00000558190 ARID3CA6NKF2 412 aa4.72□□□□□ -1.65
ATXN3-248ENST00000558190 PLEKHG5O94827 1062 aa4.72□□□□□ -1.65
ATXN3-248ENST00000558190 NFKBIBQ15653 356 aa4.72□□□□□ -1.65
ATXN3-248ENST00000558190 FOXD4L5Q5VV16 416 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-248ENST00000558190 FOXD4L4Q8WXT5 416 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-248ENST00000558190 GBP4Q96PP9 640 aa4.71□□□□□ -1.65
ATXN3-248ENST00000558190 BCL11BQ9C0K0 894 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-248ENST00000558190 ZNF777Q9ULD5 760 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-248ENST00000558190 GOLGA6L1Q8N7Z2 621 aa4.7□□□□□ -1.66
ATXN3-248ENST00000558190 MAPK8IP2Q13387 824 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-248ENST00000558190 RRP9O43818 475 aaKnown RBP4.7□□□□□ -1.66
ATXN3-248ENST00000558190 PPP1R15AO75807 674 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-248ENST00000558190 SKIDA1Q1XH10 827 aa4.69□□□□□ -1.66
ATXN3-248ENST00000558190 CASC1Q6TDU7 716 aa4.69□□□□□ -1.66
ATXN3-248ENST00000558190 HSCBQ8IWL3 235 aa4.69□□□□□ -1.66
ATXN3-248ENST00000558190 PLIN1O60240 522 aa4.69□□□□□ -1.66
ATXN3-248ENST00000558190 CSPP1Q1MSJ5 1256 aa4.69□□□□□ -1.66
ATXN3-248ENST00000558190 RGL3Q3MIN7 710 aa4.69□□□□□ -1.66
ATXN3-248ENST00000558190 NPHP1O15259 732 aa4.69□□□□□ -1.66
ATXN3-248ENST00000558190 FRAT2O75474 233 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-248ENST00000558190 MPNDQ8N594 471 aa4.69□□□□□ -1.66
ATXN3-248ENST00000558190 TRAK2O60296 914 aa4.68□□□□□ -1.66
ATXN3-248ENST00000558190 ZNF592Q92610 1267 aa4.68□□□□□ -1.66
ATXN3-248ENST00000558190 CCAR2Q8N163 923 aaKnown RBP4.68□□□□□ -1.66
ATXN3-248ENST00000558190 MS4A1P11836 297 aa4.68□□□□□ -1.66
ATXN3-248ENST00000558190 EXOC6Q8TAG9 804 aa4.68□□□□□ -1.66
ATXN3-248ENST00000558190 TPM2P07951 284 aa4.68□□□□□ -1.66
ATXN3-248ENST00000558190 CC2D1BQ5T0F9 858 aaKnown RBP4.68□□□□□ -1.66
ATXN3-248ENST00000558190 BBXQ8WY36 941 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-248ENST00000558190 MAP7D2Q96T17 732 aa4.67□□□□□ -1.66
ATXN3-248ENST00000558190 KCNJ4P48050 445 aa4.67□□□□□ -1.66
ATXN3-248ENST00000558190 RRP7BPQ9NSQ0 103 aa4.67□□□□□ -1.66
ATXN3-248ENST00000558190 IPO8O15397 1037 aaKnown RBP4.67□□□□□ -1.66
ATXN3-248ENST00000558190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.67□□□□□ -1.661e-8■■□□□ 12.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms