RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ABCC10Q5T3U5 1492 aa22.79■■□□□ 1.24
PSEN1-221ENST00000557293 SUPT5HO00267 1087 aaKnown RBP22.78■■□□□ 1.24
PSEN1-221ENST00000557293 KDM4FA0A1W2PPD8 638 aa22.74■■□□□ 1.23
PSEN1-221ENST00000557293 NPM1P06748 294 aaKnown RBP eCLIP22.7■■□□□ 1.22
PSEN1-221ENST00000557293 MAPKBP1O60336 1514 aa22.69■■□□□ 1.22
PSEN1-221ENST00000557293 DIP2BQ9P265 1576 aa22.67■■□□□ 1.22
PSEN1-221ENST00000557293 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
PSEN1-221ENST00000557293 ADCY10Q96PN6 1610 aa22.65■■□□□ 1.22
PSEN1-221ENST00000557293 KIAA0586Q9BVV6 1533 aa22.57■■□□□ 1.2
PSEN1-221ENST00000557293 IGF1RP08069 1367 aa22.56■■□□□ 1.2
PSEN1-221ENST00000557293 KDM6BO15054 1643 aa22.56■■□□□ 1.2
PSEN1-221ENST00000557293 TSPOAP1O95153 1857 aa22.5■■□□□ 1.19
PSEN1-221ENST00000557293 ILDR1Q86SU0 546 aaPredicted RBP22.5■■□□□ 1.19
PSEN1-221ENST00000557293 PTPRGP23470 1445 aa22.46■■□□□ 1.19
PSEN1-221ENST00000557293 TTBK1Q5TCY1 1321 aaPredicted RBP22.38■■□□□ 1.17
PSEN1-221ENST00000557293 KIF27Q86VH2 1401 aa22.38■■□□□ 1.17
PSEN1-221ENST00000557293 ABCC2Q92887 1545 aa22.37■■□□□ 1.17
PSEN1-221ENST00000557293 ASXL2Q76L83 1435 aa22.37■■□□□ 1.17
PSEN1-221ENST00000557293 TNIKQ9UKE5 1360 aa22.37■■□□□ 1.17
PSEN1-221ENST00000557293 PPRC1Q5VV67 1664 aaKnown RBP22.36■■□□□ 1.17
PSEN1-221ENST00000557293 COL17A1Q9UMD9 1497 aaPredicted RBP22.36■■□□□ 1.17
PSEN1-221ENST00000557293 CUL7Q14999 1698 aa22.35■■□□□ 1.17
PSEN1-221ENST00000557293 GLI2P10070 1586 aa22.34■■□□□ 1.17
PSEN1-221ENST00000557293 CARMIL1Q5VZK9 1371 aa22.34■■□□□ 1.17
PSEN1-221ENST00000557293 PLB1Q6P1J6 1458 aa22.34■■□□□ 1.17
PSEN1-221ENST00000557293 UHRF1BP1LA0JNW5 1464 aa22.3■■□□□ 1.16
PSEN1-221ENST00000557293 ADGRL1O94910 1474 aa22.3■■□□□ 1.16
PSEN1-221ENST00000557293 CARMIL2Q6F5E8 1435 aa22.3■■□□□ 1.16
PSEN1-221ENST00000557293 UACAQ9BZF9 1416 aa22.26■■□□□ 1.15
PSEN1-221ENST00000557293 DISP1Q96F81 1524 aa22.24■■□□□ 1.15
PSEN1-221ENST00000557293 EPRSP07814 1512 aaKnown RBP22.23■■□□□ 1.15
PSEN1-221ENST00000557293 KDM5BQ9UGL1 1544 aa22.21■■□□□ 1.15
PSEN1-221ENST00000557293 IQGAP2Q13576 1575 aa22.21■■□□□ 1.15
PSEN1-221ENST00000557293 MAP3K4Q9Y6R4 1608 aa22.18■■□□□ 1.14
PSEN1-221ENST00000557293 HECW2Q9P2P5 1572 aa22.14■■□□□ 1.13
PSEN1-221ENST00000557293 UGGT2Q9NYU1 1516 aa22.11■■□□□ 1.13
PSEN1-221ENST00000557293 TEX14Q8IWB6 1497 aa22.11■■□□□ 1.13
PSEN1-221ENST00000557293 ZCCHC11Q5TAX3 1644 aaKnown RBP22.1■■□□□ 1.13
PSEN1-221ENST00000557293 WDR7Q9Y4E6 1490 aa22.03■■□□□ 1.12
PSEN1-221ENST00000557293 RAPGEF2Q9Y4G8 1499 aa22.03■■□□□ 1.12
PSEN1-221ENST00000557293 KIAA0556O60303 1618 aa22.02■■□□□ 1.12
PSEN1-221ENST00000557293 MAGI3Q5TCQ9 1506 aa21.99■■□□□ 1.11
PSEN1-221ENST00000557293 CD109Q6YHK3 1445 aa21.98■■□□□ 1.11
PSEN1-221ENST00000557293 KCNH8Q96L42 1107 aa21.97■■□□□ 1.11
PSEN1-221ENST00000557293 ABCA8O94911 1581 aa21.91■■□□□ 1.1
PSEN1-221ENST00000557293 CFAP43Q8NDM7 1665 aa21.9■■□□□ 1.1
PSEN1-221ENST00000557293 FBXO41Q8TF61 875 aa21.86■■□□□ 1.09
PSEN1-221ENST00000557293 ARAP3Q8WWN8 1544 aa21.85■■□□□ 1.09
PSEN1-221ENST00000557293 KIF21BO75037 1637 aa21.84■■□□□ 1.09
PSEN1-221ENST00000557293 GOLGA3Q08378 1498 aa21.82■■□□□ 1.08
PSEN1-221ENST00000557293 CTTNBP2Q8WZ74 1663 aa21.79■■□□□ 1.08
PSEN1-221ENST00000557293 ATP10BO94823 1461 aa21.77■■□□□ 1.08
PSEN1-221ENST00000557293 PTPRMP28827 1452 aa21.77■■□□□ 1.07
PSEN1-221ENST00000557293 ADAMTSL3P82987 1691 aa21.75■■□□□ 1.07
PSEN1-221ENST00000557293 ARID3CA6NKF2 412 aa21.75■■□□□ 1.07
PSEN1-221ENST00000557293 RAPGEF3O95398 923 aa21.74■■□□□ 1.07
PSEN1-221ENST00000557293 PRXQ9BXM0 1461 aa21.73■■□□□ 1.07
PSEN1-221ENST00000557293 PHLDB1Q86UU1 1377 aa21.73■■□□□ 1.07
PSEN1-221ENST00000557293 P3H3Q8IVL6 736 aa21.71■■□□□ 1.07
PSEN1-221ENST00000557293 ABCA9Q8IUA7 1624 aa21.69■■□□□ 1.06
PSEN1-221ENST00000557293 NEO1Q92859 1461 aa21.64■■□□□ 1.05
PSEN1-221ENST00000557293 BCORL1Q5H9F3 1711 aa21.62■■□□□ 1.05
PSEN1-221ENST00000557293 FRMPD1Q5SYB0 1578 aa21.61■■□□□ 1.05
PSEN1-221ENST00000557293 LMTK3Q96Q04 1460 aa21.61■■□□□ 1.05
PSEN1-221ENST00000557293 MADDQ8WXG6 1647 aa21.59■■□□□ 1.05
PSEN1-221ENST00000557293 PCF11O94913 1555 aaKnown RBP21.59■■□□□ 1.05
PSEN1-221ENST00000557293 ARID4BQ4LE39 1312 aaPredicted RBP21.58■■□□□ 1.05
PSEN1-221ENST00000557293 FAM9AQ8IZU1 332 aaPredicted RBP21.57■■□□□ 1.04
PSEN1-221ENST00000557293 HSPA2P54652 639 aa21.54■■□□□ 1.04
PSEN1-221ENST00000557293 SAMD9Q5K651 1589 aa21.53■■□□□ 1.04
PSEN1-221ENST00000557293 RAPGEF6Q8TEU7 1601 aa21.52■■□□□ 1.04
PSEN1-221ENST00000557293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.52■■□□□ 1.04
PSEN1-221ENST00000557293 HNRNPUL2Q1KMD3 747 aaKnown RBP21.52■■□□□ 1.04
PSEN1-221ENST00000557293 NUP153P49790 1475 aaKnown RBP21.52■■□□□ 1.03
PSEN1-221ENST00000557293 FHOD3Q2V2M9 1422 aa21.48■■□□□ 1.03
PSEN1-221ENST00000557293 DENND4BO75064 1496 aaPredicted RBP21.48■■□□□ 1.03
PSEN1-221ENST00000557293 AKNAQ7Z591 1439 aa21.47■■□□□ 1.03
PSEN1-221ENST00000557293 RIMS1Q86UR5 1692 aaKnown RBP21.47■■□□□ 1.03
PSEN1-221ENST00000557293 CSRNP3Q8WYN3 585 aa21.47■■□□□ 1.03
PSEN1-221ENST00000557293 RICTORQ6R327 1708 aa21.46■■□□□ 1.03
PSEN1-221ENST00000557293 ARHGEF40Q8TER5 1519 aa21.45■■□□□ 1.02
PSEN1-221ENST00000557293 PLEKHD1A6NEE1 506 aa21.44■■□□□ 1.02
PSEN1-221ENST00000557293 CERKQ8TCT0 537 aa21.44■■□□□ 1.02
PSEN1-221ENST00000557293 SIGLEC1Q9BZZ2 1709 aa21.43■■□□□ 1.02
PSEN1-221ENST00000557293 YEATS2Q9ULM3 1422 aa21.42■■□□□ 1.02
PSEN1-221ENST00000557293 PLPPR3Q6T4P5 718 aa21.41■■□□□ 1.02
PSEN1-221ENST00000557293 FANCAO15360 1455 aa21.4■■□□□ 1.02
PSEN1-221ENST00000557293 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.39■■□□□ 1.02
PSEN1-221ENST00000557293 ZMYM4Q5VZL5 1548 aa21.38■■□□□ 1.01
PSEN1-221ENST00000557293 RANGAP1P46060 587 aaPredicted RBP21.36■■□□□ 1.01
PSEN1-221ENST00000557293 POGZQ7Z3K3 1410 aa21.36■■□□□ 1.01
PSEN1-221ENST00000557293 MLECQ14165 292 aa21.35■■□□□ 1.01
PSEN1-221ENST00000557293 ZFYVE16Q7Z3T8 1539 aa21.34■■□□□ 1.01
PSEN1-221ENST00000557293 MAGI2Q86UL8 1455 aa21.33■■□□□ 1.01
PSEN1-221ENST00000557293 TTC37Q6PGP7 1564 aa21.32■■□□□ 1
PSEN1-221ENST00000557293 HECW1Q76N89 1606 aa21.31■■□□□ 1
PSEN1-221ENST00000557293 EFCAB5A4FU69 1503 aa21.3■■□□□ 1
PSEN1-221ENST00000557293 CFAP74Q9C0B2 1584 aa21.3■■□□□ 1
PSEN1-221ENST00000557293 SCAPERQ9BY12 1400 aa21.29■■□□□ 1
PSEN1-221ENST00000557293 ILDR2Q71H61 639 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms