RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 JPH4Q96JJ6 628 aa25.08■■□□□ 1.61
ACTN1-219ENST00000556432 NPM1P06748 294 aaKnown RBP eCLIP25.07■■□□□ 1.6
ACTN1-219ENST00000556432 ABCC10Q5T3U5 1492 aa25.01■■□□□ 1.59
ACTN1-219ENST00000556432 RUSC2Q8N2Y8 1516 aa24.97■■□□□ 1.59
ACTN1-219ENST00000556432 MAPKBP1O60336 1514 aa24.95■■□□□ 1.58
ACTN1-219ENST00000556432 DIP2BQ9P265 1576 aa24.93■■□□□ 1.58
ACTN1-219ENST00000556432 ADCY10Q96PN6 1610 aa24.9■■□□□ 1.58
ACTN1-219ENST00000556432 KDM6BO15054 1643 aa24.89■■□□□ 1.57
ACTN1-219ENST00000556432 TSPOAP1O95153 1857 aa24.83■■□□□ 1.56
ACTN1-219ENST00000556432 KDM4FA0A1W2PPD8 638 aa24.82■■□□□ 1.56
ACTN1-219ENST00000556432 KIAA0586Q9BVV6 1533 aa24.79■■□□□ 1.56
ACTN1-219ENST00000556432 TTBK1Q5TCY1 1321 aaPredicted RBP24.78■■□□□ 1.56
ACTN1-219ENST00000556432 PTPRGP23470 1445 aa24.7■■□□□ 1.55
ACTN1-219ENST00000556432 IGF1RP08069 1367 aa24.69■■□□□ 1.54
ACTN1-219ENST00000556432 KIF27Q86VH2 1401 aa24.69■■□□□ 1.54
ACTN1-219ENST00000556432 CUL7Q14999 1698 aa24.69■■□□□ 1.54
ACTN1-219ENST00000556432 ILDR1Q86SU0 546 aaPredicted RBP24.63■■□□□ 1.53
ACTN1-219ENST00000556432 CARMIL2Q6F5E8 1435 aa24.61■■□□□ 1.53
ACTN1-219ENST00000556432 ABCC2Q92887 1545 aa24.61■■□□□ 1.53
ACTN1-219ENST00000556432 TNIKQ9UKE5 1360 aa24.6■■□□□ 1.53
ACTN1-219ENST00000556432 ASXL2Q76L83 1435 aa24.6■■□□□ 1.53
ACTN1-219ENST00000556432 PLB1Q6P1J6 1458 aa24.58■■□□□ 1.53
ACTN1-219ENST00000556432 CARMIL1Q5VZK9 1371 aa24.55■■□□□ 1.52
ACTN1-219ENST00000556432 ADGRL1O94910 1474 aa24.55■■□□□ 1.52
ACTN1-219ENST00000556432 GLI2P10070 1586 aa24.52■■□□□ 1.52
ACTN1-219ENST00000556432 PPRC1Q5VV67 1664 aaKnown RBP24.52■■□□□ 1.52
ACTN1-219ENST00000556432 IQGAP2Q13576 1575 aa24.5■■□□□ 1.51
ACTN1-219ENST00000556432 UACAQ9BZF9 1416 aa24.48■■□□□ 1.51
ACTN1-219ENST00000556432 UHRF1BP1LA0JNW5 1464 aa24.47■■□□□ 1.51
ACTN1-219ENST00000556432 EPRSP07814 1512 aaKnown RBP24.42■■□□□ 1.5
ACTN1-219ENST00000556432 TEX14Q8IWB6 1497 aa24.42■■□□□ 1.5
ACTN1-219ENST00000556432 COL17A1Q9UMD9 1497 aaPredicted RBP24.41■■□□□ 1.5
ACTN1-219ENST00000556432 DISP1Q96F81 1524 aa24.4■■□□□ 1.5
ACTN1-219ENST00000556432 MAP3K4Q9Y6R4 1608 aa24.39■■□□□ 1.49
ACTN1-219ENST00000556432 HECW2Q9P2P5 1572 aa24.37■■□□□ 1.49
ACTN1-219ENST00000556432 KDM5BQ9UGL1 1544 aa24.37■■□□□ 1.49
ACTN1-219ENST00000556432 ZCCHC11Q5TAX3 1644 aaKnown RBP24.35■■□□□ 1.49
ACTN1-219ENST00000556432 UGGT2Q9NYU1 1516 aa24.3■■□□□ 1.48
ACTN1-219ENST00000556432 KIAA0556O60303 1618 aa24.28■■□□□ 1.48
ACTN1-219ENST00000556432 WDR7Q9Y4E6 1490 aa24.27■■□□□ 1.48
ACTN1-219ENST00000556432 RAPGEF2Q9Y4G8 1499 aa24.27■■□□□ 1.48
ACTN1-219ENST00000556432 KCNH8Q96L42 1107 aa24.2■■□□□ 1.46
ACTN1-219ENST00000556432 CD109Q6YHK3 1445 aa24.19■■□□□ 1.46
ACTN1-219ENST00000556432 MAGI3Q5TCQ9 1506 aa24.14■■□□□ 1.45
ACTN1-219ENST00000556432 CFAP43Q8NDM7 1665 aa24.13■■□□□ 1.45
ACTN1-219ENST00000556432 GOLGA3Q08378 1498 aa24.11■■□□□ 1.45
ACTN1-219ENST00000556432 KIF21BO75037 1637 aa24.08■■□□□ 1.45
ACTN1-219ENST00000556432 CTTNBP2Q8WZ74 1663 aa24.08■■□□□ 1.44
ACTN1-219ENST00000556432 ABCA8O94911 1581 aa24.07■■□□□ 1.44
ACTN1-219ENST00000556432 ARID3CA6NKF2 412 aa24.03■■□□□ 1.44
ACTN1-219ENST00000556432 FBXO41Q8TF61 875 aa24■■□□□ 1.43
ACTN1-219ENST00000556432 FAM9AQ8IZU1 332 aaPredicted RBP23.99■■□□□ 1.43
ACTN1-219ENST00000556432 ARAP3Q8WWN8 1544 aa23.96■■□□□ 1.43
ACTN1-219ENST00000556432 P3H3Q8IVL6 736 aa23.91■■□□□ 1.42
ACTN1-219ENST00000556432 PTPRMP28827 1452 aa23.91■■□□□ 1.42
ACTN1-219ENST00000556432 ARID4BQ4LE39 1312 aaPredicted RBP23.88■■□□□ 1.41
ACTN1-219ENST00000556432 RAPGEF3O95398 923 aa23.88■■□□□ 1.41
ACTN1-219ENST00000556432 ATP10BO94823 1461 aa23.87■■□□□ 1.41
ACTN1-219ENST00000556432 PHLDB1Q86UU1 1377 aa23.87■■□□□ 1.41
ACTN1-219ENST00000556432 ADAMTSL3P82987 1691 aa23.86■■□□□ 1.41
ACTN1-219ENST00000556432 ABCA9Q8IUA7 1624 aa23.85■■□□□ 1.41
ACTN1-219ENST00000556432 PRXQ9BXM0 1461 aa23.84■■□□□ 1.41
ACTN1-219ENST00000556432 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.84■■□□□ 1.41
ACTN1-219ENST00000556432 HNRNPUL2Q1KMD3 747 aaKnown RBP23.84■■□□□ 1.41
ACTN1-219ENST00000556432 NEO1Q92859 1461 aa23.8■■□□□ 1.4
ACTN1-219ENST00000556432 PCF11O94913 1555 aaKnown RBP23.79■■□□□ 1.4
ACTN1-219ENST00000556432 MADDQ8WXG6 1647 aa23.78■■□□□ 1.4
ACTN1-219ENST00000556432 BCORL1Q5H9F3 1711 aa23.78■■□□□ 1.4
ACTN1-219ENST00000556432 FRMPD1Q5SYB0 1578 aa23.74■■□□□ 1.39
ACTN1-219ENST00000556432 RAPGEF6Q8TEU7 1601 aa23.74■■□□□ 1.39
ACTN1-219ENST00000556432 LMTK3Q96Q04 1460 aa23.74■■□□□ 1.39
ACTN1-219ENST00000556432 PLPPR3Q6T4P5 718 aa23.73■■□□□ 1.39
ACTN1-219ENST00000556432 RIMS1Q86UR5 1692 aaKnown RBP23.7■■□□□ 1.38
ACTN1-219ENST00000556432 ARHGEF40Q8TER5 1519 aa23.69■■□□□ 1.38
ACTN1-219ENST00000556432 RANGAP1P46060 587 aaPredicted RBP23.68■■□□□ 1.38
ACTN1-219ENST00000556432 SAMD9Q5K651 1589 aa23.68■■□□□ 1.38
ACTN1-219ENST00000556432 DENND4BO75064 1496 aaPredicted RBP23.67■■□□□ 1.38
ACTN1-219ENST00000556432 HSPA2P54652 639 aa23.66■■□□□ 1.38
ACTN1-219ENST00000556432 NUP153P49790 1475 aaKnown RBP23.65■■□□□ 1.38
ACTN1-219ENST00000556432 POGZQ7Z3K3 1410 aa23.62■■□□□ 1.37
ACTN1-219ENST00000556432 AKNAQ7Z591 1439 aa23.61■■□□□ 1.37
ACTN1-219ENST00000556432 PLEKHD1A6NEE1 506 aa23.61■■□□□ 1.37
ACTN1-219ENST00000556432 FANCAO15360 1455 aa23.61■■□□□ 1.37
ACTN1-219ENST00000556432 RICTORQ6R327 1708 aa23.59■■□□□ 1.37
ACTN1-219ENST00000556432 CFAP74Q9C0B2 1584 aa23.59■■□□□ 1.37
ACTN1-219ENST00000556432 FHOD3Q2V2M9 1422 aa23.59■■□□□ 1.37
ACTN1-219ENST00000556432 CSRNP3Q8WYN3 585 aa23.58■■□□□ 1.37
ACTN1-219ENST00000556432 MLECQ14165 292 aa23.56■■□□□ 1.36
ACTN1-219ENST00000556432 ZFYVE16Q7Z3T8 1539 aa23.55■■□□□ 1.36
ACTN1-219ENST00000556432 EFCAB5A4FU69 1503 aa23.54■■□□□ 1.36
ACTN1-219ENST00000556432 YEATS2Q9ULM3 1422 aa23.53■■□□□ 1.36
ACTN1-219ENST00000556432 CERKQ8TCT0 537 aa23.52■■□□□ 1.36
ACTN1-219ENST00000556432 ZMYM4Q5VZL5 1548 aa23.52■■□□□ 1.36
ACTN1-219ENST00000556432 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.52■■□□□ 1.36
ACTN1-219ENST00000556432 TTC37Q6PGP7 1564 aa23.5■■□□□ 1.35
ACTN1-219ENST00000556432 SIGLEC1Q9BZZ2 1709 aa23.47■■□□□ 1.35
ACTN1-219ENST00000556432 FER1L4A9Z1Z3 1794 aa23.47■■□□□ 1.35
ACTN1-219ENST00000556432 MAGI2Q86UL8 1455 aa23.46■■□□□ 1.35
ACTN1-219ENST00000556432 HECW1Q76N89 1606 aa23.45■■□□□ 1.34
ACTN1-219ENST00000556432 SCAPERQ9BY12 1400 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms