RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 ADAMTS12P58397 1594 aa29.09■■■□□ 2.25
SDR39U1-218ENST00000556262 CTTNBP2Q8WZ74 1663 aa29.09■■■□□ 2.25
SDR39U1-218ENST00000556262 TTBK1Q5TCY1 1321 aaPredicted RBP29.09■■■□□ 2.25
SDR39U1-218ENST00000556262 SNAPC4Q5SXM2 1469 aa29.02■■■□□ 2.24
SDR39U1-218ENST00000556262 P3H3Q8IVL6 736 aa28.97■■■□□ 2.23
SDR39U1-218ENST00000556262 HRCP23327 699 aa28.93■■■□□ 2.22
SDR39U1-218ENST00000556262 APLP2Q06481 763 aa28.93■■■□□ 2.22
SDR39U1-218ENST00000556262 MAGI1Q96QZ7 1491 aaPredicted RBP28.9■■■□□ 2.22
SDR39U1-218ENST00000556262 EFCAB5A4FU69 1503 aa28.88■■■□□ 2.21
SDR39U1-218ENST00000556262 FHOD3Q2V2M9 1422 aa28.88■■■□□ 2.21
SDR39U1-218ENST00000556262 GRIN2AQ12879 1464 aa28.84■■■□□ 2.21
SDR39U1-218ENST00000556262 CHMP7Q8WUX9 453 aaPredicted RBP28.82■■■□□ 2.2
SDR39U1-218ENST00000556262 SYNJ2O15056 1496 aa28.81■■■□□ 2.2
SDR39U1-218ENST00000556262 FBLN2P98095 1184 aa28.8■■■□□ 2.2
SDR39U1-218ENST00000556262 IQGAP2Q13576 1575 aa28.8■■■□□ 2.2
SDR39U1-218ENST00000556262 SAMD9Q5K651 1589 aa28.8■■■□□ 2.2
SDR39U1-218ENST00000556262 KANK4Q5T7N3 995 aaPredicted RBP28.74■■■□□ 2.19
SDR39U1-218ENST00000556262 PCF11O94913 1555 aaKnown RBP28.72■■■□□ 2.19
SDR39U1-218ENST00000556262 KIAA0586Q9BVV6 1533 aa28.71■■■□□ 2.19
SDR39U1-218ENST00000556262 CEP170Q5SW79 1584 aa28.69■■■□□ 2.18
SDR39U1-218ENST00000556262 ATP1B4Q9UN42 357 aaPredicted RBP28.67■■■□□ 2.18
SDR39U1-218ENST00000556262 FMN1Q68DA7 1419 aa28.66■■■□□ 2.18
SDR39U1-218ENST00000556262 UGGT2Q9NYU1 1516 aa28.64■■■□□ 2.18
SDR39U1-218ENST00000556262 CASKIN1Q8WXD9 1431 aa28.62■■■□□ 2.17
SDR39U1-218ENST00000556262 TIAM1Q13009 1591 aa28.62■■■□□ 2.17
SDR39U1-218ENST00000556262 FYCO1Q9BQS8 1478 aa28.61■■■□□ 2.17
SDR39U1-218ENST00000556262 NUP160Q12769 1436 aa28.6■■■□□ 2.17
SDR39U1-218ENST00000556262 MAP3K1Q13233 1512 aa28.58■■■□□ 2.17
SDR39U1-218ENST00000556262 DISP1Q96F81 1524 aa28.54■■■□□ 2.16
SDR39U1-218ENST00000556262 CFAP43Q8NDM7 1665 aa28.52■■■□□ 2.16
SDR39U1-218ENST00000556262 CHD1O14646 1710 aa28.51■■■□□ 2.15
SDR39U1-218ENST00000556262 KIAA0556O60303 1618 aa28.51■■■□□ 2.15
SDR39U1-218ENST00000556262 LRRC9Q6ZRR7 1453 aa28.5■■■□□ 2.15
SDR39U1-218ENST00000556262 JPH4Q96JJ6 628 aa28.47■■■□□ 2.15
SDR39U1-218ENST00000556262 LRRIQ1Q96JM4 1722 aa28.46■■■□□ 2.15
SDR39U1-218ENST00000556262 HNRNPUL2Q1KMD3 747 aaKnown RBP28.36■■■□□ 2.13
SDR39U1-218ENST00000556262 HECW1Q76N89 1606 aa28.34■■■□□ 2.13
SDR39U1-218ENST00000556262 CARMIL2Q6F5E8 1435 aa28.34■■■□□ 2.13
SDR39U1-218ENST00000556262 RRBP1Q9P2E9 1410 aaKnown RBP28.32■■■□□ 2.12
SDR39U1-218ENST00000556262 PHLDB1Q86UU1 1377 aa28.3■■■□□ 2.12
SDR39U1-218ENST00000556262 ARID3CA6NKF2 412 aa28.3■■■□□ 2.12
SDR39U1-218ENST00000556262 MTUS2Q5JR59 1369 aa28.29■■■□□ 2.12
SDR39U1-218ENST00000556262 EPRSP07814 1512 aaKnown RBP28.28■■■□□ 2.12
SDR39U1-218ENST00000556262 CCDC18Q5T9S5 1454 aa28.28■■■□□ 2.12
SDR39U1-218ENST00000556262 PRG4Q92954 1404 aaPredicted RBP28.26■■■□□ 2.11
SDR39U1-218ENST00000556262 CCNB3Q8WWL7 1395 aa28.26■■■□□ 2.11
SDR39U1-218ENST00000556262 CDK13Q14004 1512 aaKnown RBP28.26■■■□□ 2.11
SDR39U1-218ENST00000556262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.25■■■□□ 2.11
SDR39U1-218ENST00000556262 RAPGEF6Q8TEU7 1601 aa28.24■■■□□ 2.11
SDR39U1-218ENST00000556262 MAGI3Q5TCQ9 1506 aa28.22■■■□□ 2.11
SDR39U1-218ENST00000556262 PLB1Q6P1J6 1458 aa28.22■■■□□ 2.11
SDR39U1-218ENST00000556262 NUP153P49790 1475 aaKnown RBP28.21■■■□□ 2.11
SDR39U1-218ENST00000556262 SHROOM2Q13796 1616 aa28.18■■■□□ 2.1
SDR39U1-218ENST00000556262 EHBP1L1Q8N3D4 1523 aa28.17■■■□□ 2.1
SDR39U1-218ENST00000556262 ZEB1P37275 1124 aaPredicted RBP28.15■■■□□ 2.1
SDR39U1-218ENST00000556262 CLASP1Q7Z460 1538 aa28.13■■■□□ 2.09
SDR39U1-218ENST00000556262 NCOA2Q15596 1464 aa28.13■■■□□ 2.09
SDR39U1-218ENST00000556262 SUPT6HQ7KZ85 1726 aaKnown RBP28.12■■■□□ 2.09
SDR39U1-218ENST00000556262 ITGAEP38570 1179 aa28.11■■■□□ 2.09
SDR39U1-218ENST00000556262 CCER1Q8TC90 406 aaPredicted RBP28.11■■■□□ 2.09
SDR39U1-218ENST00000556262 ERCC6L2Q5T890 1561 aa28.1■■■□□ 2.09
SDR39U1-218ENST00000556262 PTPRGP23470 1445 aa28.09■■■□□ 2.09
SDR39U1-218ENST00000556262 FAM50AQ14320 339 aaKnown RBP28.09■■■□□ 2.09
SDR39U1-218ENST00000556262 ABCA8O94911 1581 aa28.08■■■□□ 2.09
SDR39U1-218ENST00000556262 FGD6Q6ZV73 1430 aa28.04■■■□□ 2.08
SDR39U1-218ENST00000556262 ARHGEF11O15085 1522 aa28.04■■■□□ 2.08
SDR39U1-218ENST00000556262 MYOM3Q5VTT5 1437 aa28.01■■■□□ 2.08
SDR39U1-218ENST00000556262 CDK11AQ9UQ88 783 aaPredicted RBP27.99■■■□□ 2.07
SDR39U1-218ENST00000556262 ATP10BO94823 1461 aa27.95■■■□□ 2.06
SDR39U1-218ENST00000556262 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.94■■■□□ 2.06
SDR39U1-218ENST00000556262 TROQ12816 1431 aaPredicted RBP27.92■■■□□ 2.06
SDR39U1-218ENST00000556262 UACAQ9BZF9 1416 aa27.91■■■□□ 2.06
SDR39U1-218ENST00000556262 PTPN23Q9H3S7 1636 aa27.88■■■□□ 2.05
SDR39U1-218ENST00000556262 OSCARQ8IYS5 282 aa27.86■■■□□ 2.05
SDR39U1-218ENST00000556262 PLEKHD1A6NEE1 506 aa27.84■■■□□ 2.05
SDR39U1-218ENST00000556262 KIF14Q15058 1648 aa27.84■■■□□ 2.05
SDR39U1-218ENST00000556262 ABCC2Q92887 1545 aa27.81■■■□□ 2.04
SDR39U1-218ENST00000556262 MIA2Q96PC5 1412 aa27.8■■■□□ 2.04
SDR39U1-218ENST00000556262 ADCY10Q96PN6 1610 aa27.8■■■□□ 2.04
SDR39U1-218ENST00000556262 TCOF1Q13428 1488 aaKnown RBP27.8■■■□□ 2.04
SDR39U1-218ENST00000556262 PTPRKQ15262 1439 aa27.79■■■□□ 2.04
SDR39U1-218ENST00000556262 RAB3GAP2Q9H2M9 1393 aa27.77■■■□□ 2.04
SDR39U1-218ENST00000556262 SETD5Q9C0A6 1442 aa27.76■■■□□ 2.03
SDR39U1-218ENST00000556262 DHX57Q6P158 1386 aaKnown RBP27.72■■■□□ 2.03
SDR39U1-218ENST00000556262 GPATCH8Q9UKJ3 1502 aaKnown RBP27.72■■■□□ 2.03
SDR39U1-218ENST00000556262 ZNF644Q9H582 1327 aaPredicted RBP27.71■■■□□ 2.03
SDR39U1-218ENST00000556262 UHRF1BP1LA0JNW5 1464 aa27.68■■■□□ 2.02
SDR39U1-218ENST00000556262 ABCC10Q5T3U5 1492 aa27.68■■■□□ 2.02
SDR39U1-218ENST00000556262 CFDP1Q9UEE9 299 aaPredicted RBP27.68■■■□□ 2.02
SDR39U1-218ENST00000556262 ITSN2Q9NZM3 1697 aa27.67■■■□□ 2.02
SDR39U1-218ENST00000556262 CHIC2Q9UKJ5 165 aa27.64■■■□□ 2.02
SDR39U1-218ENST00000556262 ZCCHC11Q5TAX3 1644 aaKnown RBP27.64■■■□□ 2.02
SDR39U1-218ENST00000556262 CDC42BPAQ5VT25 1732 aa27.63■■■□□ 2.01
SDR39U1-218ENST00000556262 KDM5BQ9UGL1 1544 aa27.62■■■□□ 2.01
SDR39U1-218ENST00000556262 ZNF777Q9ULD5 760 aaPredicted RBP27.62■■■□□ 2.01
SDR39U1-218ENST00000556262 HFM1A2PYH4 1435 aa27.6■■■□□ 2.01
SDR39U1-218ENST00000556262 CAMSAP2Q08AD1 1489 aa27.59■■■□□ 2.01
SDR39U1-218ENST00000556262 NAIPQ13075 1403 aa27.58■■■□□ 2
SDR39U1-218ENST00000556262 DAPK1P53355 1430 aa27.57■■■□□ 2
SDR39U1-218ENST00000556262 RRP7BPQ9NSQ0 103 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms