RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-208ENST00000556067 ZBTB47Q9UFB7 747 aaPredicted RBP9.65□□□□□ -0.86
ATL1-208ENST00000556067 CD44P16070 742 aaKnown RBP9.63□□□□□ -0.87
ATL1-208ENST00000556067 BAZ1AQ9NRL2 1556 aaPredicted RBP9.62□□□□□ -0.87
ATL1-208ENST00000556067 CECR2Q9BXF3 1484 aa9.61□□□□□ -0.87
ATL1-208ENST00000556067 C19orf67A6NJJ6 358 aa9.61□□□□□ -0.87
ATL1-208ENST00000556067 IFNLR1Q8IU57 520 aaPredicted RBP9.61□□□□□ -0.87
ATL1-208ENST00000556067 RSF1Q96T23 1441 aaPredicted RBP9.6□□□□□ -0.87
ATL1-208ENST00000556067 EVX2Q03828 476 aa9.59□□□□□ -0.87
ATL1-208ENST00000556067 PAK3O75914 559 aaPredicted RBP9.58□□□□□ -0.88
ATL1-208ENST00000556067 TSPYL2Q9H2G4 693 aaPredicted RBP9.58□□□□□ -0.88
ATL1-208ENST00000556067 ZRANB1Q9UGI0 708 aa9.57□□□□□ -0.88
ATL1-208ENST00000556067 MROH2BQ7Z745 1585 aa9.55□□□□□ -0.88
ATL1-208ENST00000556067 RASEFQ8IZ41 740 aa9.55□□□□□ -0.88
ATL1-208ENST00000556067 SMARCA4P51532 1647 aa9.53□□□□□ -0.88
ATL1-208ENST00000556067 NUBP1P53384 320 aa9.53□□□□□ -0.88
ATL1-208ENST00000556067 SPOCK2Q92563 424 aa9.53□□□□□ -0.88
ATL1-208ENST00000556067 DCAF8Q5TAQ9 597 aa9.51□□□□□ -0.89
ATL1-208ENST00000556067 FAM212AQ96EL1 285 aa9.5□□□□□ -0.89
ATL1-208ENST00000556067 SP7Q8TDD2 431 aaPredicted RBP9.49□□□□□ -0.89
ATL1-208ENST00000556067 PHF12Q96QT6 1004 aa9.48□□□□□ -0.89
ATL1-208ENST00000556067 CIZ1Q9ULV3 898 aaPredicted RBP9.47□□□□□ -0.89
ATL1-208ENST00000556067 WIZO95785 1651 aa9.46□□□□□ -0.89
ATL1-208ENST00000556067 SMARCA2P51531 1590 aa9.45□□□□□ -0.9
ATL1-208ENST00000556067 ZNF579Q8NAF0 562 aaKnown RBP9.44□□□□□ -0.9
ATL1-208ENST00000556067 EIF4G1Q04637 1599 aaKnown RBP9.44□□□□□ -0.9
ATL1-208ENST00000556067 CCDC61Q9Y6R9 512 aa9.43□□□□□ -0.9
ATL1-208ENST00000556067 GSE1Q14687 1217 aa9.42□□□□□ -0.9
ATL1-208ENST00000556067 ATAD2BQ9ULI0 1458 aa9.41□□□□□ -0.9
ATL1-208ENST00000556067 PEG3Q9GZU2 1588 aa9.41□□□□□ -0.9
ATL1-208ENST00000556067 TOP2AP11388 1531 aaKnown RBP9.41□□□□□ -0.9
ATL1-208ENST00000556067 GABBR2O75899 941 aa9.4□□□□□ -0.9
ATL1-208ENST00000556067 BAZ1BQ9UIG0 1483 aaKnown RBP9.4□□□□□ -0.91
ATL1-208ENST00000556067 PYGBP11216 843 aa9.39□□□□□ -0.91
ATL1-208ENST00000556067 NCAPD3P42695 1498 aa9.36□□□□□ -0.91
ATL1-208ENST00000556067 MAP3K13O43283 966 aa9.35□□□□□ -0.91
ATL1-208ENST00000556067 GALR2O43603 387 aaPredicted RBP9.35□□□□□ -0.91
ATL1-208ENST00000556067 KIF12Q96FN5 646 aa9.35□□□□□ -0.91
ATL1-208ENST00000556067 MS4A3Q96HJ5 214 aa9.34□□□□□ -0.91
ATL1-208ENST00000556067 PCDHB13Q9Y5F0 798 aa9.33□□□□□ -0.92
ATL1-208ENST00000556067 HMGXB3Q12766 1538 aa9.32□□□□□ -0.92
ATL1-208ENST00000556067 CCDC88BA6NC98 1476 aa9.32□□□□□ -0.92
ATL1-208ENST00000556067 CC2D2AQ9P2K1 1620 aa9.31□□□□□ -0.92
ATL1-208ENST00000556067 CLCN6P51797 869 aa9.31□□□□□ -0.92
ATL1-208ENST00000556067 DCBLD2Q96PD2 775 aa9.28□□□□□ -0.92
ATL1-208ENST00000556067 IFNL1Q8IU54 200 aa9.27□□□□□ -0.93
ATL1-208ENST00000556067 PCDHB8Q9UN66 801 aa9.27□□□□□ -0.93
ATL1-208ENST00000556067 ECM2O94769 699 aaPredicted RBP9.25□□□□□ -0.93
ATL1-208ENST00000556067 TRIM41Q8WV44 630 aa9.25□□□□□ -0.93
ATL1-208ENST00000556067 TRPC6Q9Y210 931 aa9.25□□□□□ -0.93
ATL1-208ENST00000556067 PKD2Q13563 968 aa9.24□□□□□ -0.93
ATL1-208ENST00000556067 SGIP1Q9BQI5 828 aa9.24□□□□□ -0.93
ATL1-208ENST00000556067 CHRM1P11229 460 aaPredicted RBP9.23□□□□□ -0.93
ATL1-208ENST00000556067 ZNF467Q7Z7K2 595 aaPredicted RBP9.22□□□□□ -0.93
ATL1-208ENST00000556067 POTEIP0CG38 1075 aa9.18□□□□□ -0.94
ATL1-208ENST00000556067 TMEM106CQ9BVX2 250 aa9.17□□□□□ -0.94
ATL1-208ENST00000556067 BMP2KQ9NSY1 1161 aaPredicted RBP9.17□□□□□ -0.94
ATL1-208ENST00000556067 TIE1P35590 1138 aa9.16□□□□□ -0.94
ATL1-208ENST00000556067 TTLL13PA6NNM8 815 aa9.15□□□□□ -0.94
ATL1-208ENST00000556067 RIOK3O14730 519 aaKnown RBP9.15□□□□□ -0.94
ATL1-208ENST00000556067 RGL2O15211 777 aa9.15□□□□□ -0.94
ATL1-208ENST00000556067 ATMINO43313 823 aaPredicted RBP9.15□□□□□ -0.94
ATL1-208ENST00000556067 PSEN1P49768 467 aa9.15□□□□□ -0.94
ATL1-208ENST00000556067 RNF25Q96BH1 459 aaPredicted RBP9.15□□□□□ -0.94
ATL1-208ENST00000556067 CADPSQ9ULU8 1353 aa9.14□□□□□ -0.95
ATL1-208ENST00000556067 ATN1P54259 1190 aaPredicted RBP9.14□□□□□ -0.95
ATL1-208ENST00000556067 PDAP1Q13442 181 aaKnown RBP9.13□□□□□ -0.95
ATL1-208ENST00000556067 AMER1Q5JTC6 1135 aaPredicted RBP9.12□□□□□ -0.95
ATL1-208ENST00000556067 ASTLQ6HA08 431 aaPredicted RBP9.12□□□□□ -0.95
ATL1-208ENST00000556067 RTN4Q9NQC3 1192 aaKnown RBP9.12□□□□□ -0.95
ATL1-208ENST00000556067 CFTRP13569 1480 aa9.12□□□□□ -0.95
ATL1-208ENST00000556067 PELP1Q8IZL8 1130 aaKnown RBP9.11□□□□□ -0.95
ATL1-208ENST00000556067 TRIM35Q9UPQ4 493 aa9.11□□□□□ -0.95
ATL1-208ENST00000556067 WRNQ14191 1432 aaPredicted RBP eCLIP9.09□□□□□ -0.95
ATL1-208ENST00000556067 VGFO15240 615 aaPredicted RBP9.09□□□□□ -0.95
ATL1-208ENST00000556067 GOLGA2Q08379 1002 aa9.09□□□□□ -0.95
ATL1-208ENST00000556067 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.08□□□□□ -0.96
ATL1-208ENST00000556067 ZFP91Q96JP5 570 aaPredicted RBP9.08□□□□□ -0.96
ATL1-208ENST00000556067 TAOK2Q9UL54 1235 aa9.07□□□□□ -0.96
ATL1-208ENST00000556067 CABP2Q9NPB3 220 aa9.06□□□□□ -0.96
ATL1-208ENST00000556067 ABCC8Q09428 1581 aa9.06□□□□□ -0.96
ATL1-208ENST00000556067 LAMC3Q9Y6N6 1575 aa9.05□□□□□ -0.96
ATL1-208ENST00000556067 SLC39A7Q92504 469 aa9.05□□□□□ -0.96
ATL1-208ENST00000556067 METRNQ9UJH8 293 aa9.05□□□□□ -0.96
ATL1-208ENST00000556067 PDS5BQ9NTI5 1447 aa9.05□□□□□ -0.96
ATL1-208ENST00000556067 STK25O00506 426 aa9.04□□□□□ -0.96
ATL1-208ENST00000556067 BCL11BQ9C0K0 894 aaPredicted RBP9.03□□□□□ -0.96
ATL1-208ENST00000556067 STK24Q9Y6E0 443 aa9.03□□□□□ -0.96
ATL1-208ENST00000556067 FANCD2Q9BXW9 1451 aa9.02□□□□□ -0.96
ATL1-208ENST00000556067 SEC24BO95487 1268 aa9.02□□□□□ -0.97
ATL1-208ENST00000556067 MKRN3Q13064 507 aaKnown RBP9.02□□□□□ -0.97
ATL1-208ENST00000556067 FAM9AQ8IZU1 332 aaPredicted RBP9.02□□□□□ -0.97
ATL1-208ENST00000556067 C7P10643 843 aa9.01□□□□□ -0.97
ATL1-208ENST00000556067 PRDM2Q13029 1718 aa9.01□□□□□ -0.97
ATL1-208ENST00000556067 NESP48681 1621 aa9□□□□□ -0.97
ATL1-208ENST00000556067 CHGAP10645 457 aaKnown RBP8.99□□□□□ -0.97
ATL1-208ENST00000556067 CEP164Q9UPV0 1460 aa8.99□□□□□ -0.97
ATL1-208ENST00000556067 EFCAB3Q8N7B9 438 aa8.98□□□□□ -0.97
ATL1-208ENST00000556067 EEA1Q15075 1411 aa8.97□□□□□ -0.97
ATL1-208ENST00000556067 PLCG2P16885 1265 aa8.97□□□□□ -0.97
ATL1-208ENST00000556067 IER5LQ5T953 404 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms