RNA–Protein interactions for RNA: ENST00000555314.1

TMEM253-205, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-205ENST00000555314 PRG4Q92954 1404 aaPredicted RBP22.31■■□□□ 1.16
TMEM253-205ENST00000555314 NPM1P06748 294 aaKnown RBP eCLIP22.17■■□□□ 1.14
TMEM253-205ENST00000555314 ABCC10Q5T3U5 1492 aa22.15■■□□□ 1.14
TMEM253-205ENST00000555314 RUSC2Q8N2Y8 1516 aa22.14■■□□□ 1.13
TMEM253-205ENST00000555314 KIAA0586Q9BVV6 1533 aa22.13■■□□□ 1.13
TMEM253-205ENST00000555314 IGF1RP08069 1367 aa22.12■■□□□ 1.13
TMEM253-205ENST00000555314 MAPKBP1O60336 1514 aa22.11■■□□□ 1.13
TMEM253-205ENST00000555314 FAM69CQ0P6D2 419 aa22.11■■□□□ 1.13
TMEM253-205ENST00000555314 KIF27Q86VH2 1401 aa22.09■■□□□ 1.13
TMEM253-205ENST00000555314 KIF13AQ9H1H9 1805 aa22.07■■□□□ 1.12
TMEM253-205ENST00000555314 ADCY10Q96PN6 1610 aa21.99■■□□□ 1.11
TMEM253-205ENST00000555314 DIP2BQ9P265 1576 aa21.99■■□□□ 1.11
TMEM253-205ENST00000555314 CUL7Q14999 1698 aa21.98■■□□□ 1.11
TMEM253-205ENST00000555314 PTPRGP23470 1445 aa21.97■■□□□ 1.11
TMEM253-205ENST00000555314 CARMIL1Q5VZK9 1371 aa21.95■■□□□ 1.1
TMEM253-205ENST00000555314 CARMIL2Q6F5E8 1435 aa21.92■■□□□ 1.1
TMEM253-205ENST00000555314 TNIKQ9UKE5 1360 aa21.91■■□□□ 1.1
TMEM253-205ENST00000555314 ABCC2Q92887 1545 aa21.87■■□□□ 1.09
TMEM253-205ENST00000555314 PLB1Q6P1J6 1458 aa21.84■■□□□ 1.09
TMEM253-205ENST00000555314 UHRF1BP1LA0JNW5 1464 aa21.83■■□□□ 1.09
TMEM253-205ENST00000555314 KDM6BO15054 1643 aa21.83■■□□□ 1.08
TMEM253-205ENST00000555314 KDM4FA0A1W2PPD8 638 aa21.81■■□□□ 1.08
TMEM253-205ENST00000555314 ASXL2Q76L83 1435 aa21.79■■□□□ 1.08
TMEM253-205ENST00000555314 IQGAP2Q13576 1575 aa21.78■■□□□ 1.08
TMEM253-205ENST00000555314 UACAQ9BZF9 1416 aa21.78■■□□□ 1.08
TMEM253-205ENST00000555314 GLI2P10070 1586 aa21.78■■□□□ 1.08
TMEM253-205ENST00000555314 DISP1Q96F81 1524 aa21.74■■□□□ 1.07
TMEM253-205ENST00000555314 TTBK1Q5TCY1 1321 aaPredicted RBP21.73■■□□□ 1.07
TMEM253-205ENST00000555314 KDM5BQ9UGL1 1544 aa21.71■■□□□ 1.07
TMEM253-205ENST00000555314 RAPGEF2Q9Y4G8 1499 aa21.71■■□□□ 1.07
TMEM253-205ENST00000555314 UGGT2Q9NYU1 1516 aa21.7■■□□□ 1.07
TMEM253-205ENST00000555314 TSPOAP1O95153 1857 aa21.66■■□□□ 1.06
TMEM253-205ENST00000555314 EPRSP07814 1512 aaKnown RBP21.65■■□□□ 1.06
TMEM253-205ENST00000555314 SENP3Q9H4L4 574 aaPredicted RBP21.65■■□□□ 1.06
TMEM253-205ENST00000555314 TEX14Q8IWB6 1497 aa21.64■■□□□ 1.05
TMEM253-205ENST00000555314 PPRC1Q5VV67 1664 aaKnown RBP21.6■■□□□ 1.05
TMEM253-205ENST00000555314 COL17A1Q9UMD9 1497 aaPredicted RBP21.58■■□□□ 1.05
TMEM253-205ENST00000555314 KIAA0556O60303 1618 aa21.57■■□□□ 1.04
TMEM253-205ENST00000555314 MAP3K4Q9Y6R4 1608 aa21.55■■□□□ 1.04
TMEM253-205ENST00000555314 WDR7Q9Y4E6 1490 aa21.55■■□□□ 1.04
TMEM253-205ENST00000555314 GOLGA3Q08378 1498 aa21.54■■□□□ 1.04
TMEM253-205ENST00000555314 ADGRL1O94910 1474 aa21.53■■□□□ 1.04
TMEM253-205ENST00000555314 ZCCHC11Q5TAX3 1644 aaKnown RBP21.51■■□□□ 1.03
TMEM253-205ENST00000555314 MAGI3Q5TCQ9 1506 aa21.48■■□□□ 1.03
TMEM253-205ENST00000555314 CD109Q6YHK3 1445 aa21.46■■□□□ 1.03
TMEM253-205ENST00000555314 PRXQ9BXM0 1461 aa21.45■■□□□ 1.03
TMEM253-205ENST00000555314 FAM9AQ8IZU1 332 aaPredicted RBP21.43■■□□□ 1.02
TMEM253-205ENST00000555314 ABCA8O94911 1581 aa21.43■■□□□ 1.02
TMEM253-205ENST00000555314 KCNH8Q96L42 1107 aa21.38■■□□□ 1.01
TMEM253-205ENST00000555314 ILDR1Q86SU0 546 aaPredicted RBP21.37■■□□□ 1.01
TMEM253-205ENST00000555314 CTTNBP2Q8WZ74 1663 aa21.36■■□□□ 1.01
TMEM253-205ENST00000555314 PHLDB1Q86UU1 1377 aa21.36■■□□□ 1.01
TMEM253-205ENST00000555314 CFAP43Q8NDM7 1665 aa21.35■■□□□ 1.01
TMEM253-205ENST00000555314 PLPPR3Q6T4P5 718 aa21.35■■□□□ 1.01
TMEM253-205ENST00000555314 ARAP3Q8WWN8 1544 aa21.32■■□□□ 1
TMEM253-205ENST00000555314 ATP10BO94823 1461 aa21.28■■□□□ 1
TMEM253-205ENST00000555314 HECW2Q9P2P5 1572 aa21.27■■□□□ 1
TMEM253-205ENST00000555314 CSRNP3Q8WYN3 585 aa21.23■□□□□ 0.99
TMEM253-205ENST00000555314 NEO1Q92859 1461 aa21.2■□□□□ 0.98
TMEM253-205ENST00000555314 P3H3Q8IVL6 736 aa21.19■□□□□ 0.98
TMEM253-205ENST00000555314 ABCA9Q8IUA7 1624 aa21.18■□□□□ 0.98
TMEM253-205ENST00000555314 SAMD9Q5K651 1589 aa21.15■□□□□ 0.98
TMEM253-205ENST00000555314 ARID3CA6NKF2 412 aa21.15■□□□□ 0.98
TMEM253-205ENST00000555314 EEA1Q15075 1411 aa21.13■□□□□ 0.97
TMEM253-205ENST00000555314 RAPGEF3O95398 923 aa21.12■□□□□ 0.97
TMEM253-205ENST00000555314 NUP153P49790 1475 aaKnown RBP21.09■□□□□ 0.97
TMEM253-205ENST00000555314 KIF21BO75037 1637 aa21.09■□□□□ 0.97
TMEM253-205ENST00000555314 RAPGEF6Q8TEU7 1601 aa21.09■□□□□ 0.97
TMEM253-205ENST00000555314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.09■□□□□ 0.97
TMEM253-205ENST00000555314 HNRNPUL2Q1KMD3 747 aaKnown RBP21.09■□□□□ 0.97
TMEM253-205ENST00000555314 PTPRMP28827 1452 aa21.08■□□□□ 0.97
TMEM253-205ENST00000555314 PLEKHD1A6NEE1 506 aa21.07■□□□□ 0.96
TMEM253-205ENST00000555314 ADAMTSL3P82987 1691 aa21.05■□□□□ 0.96
TMEM253-205ENST00000555314 FHOD3Q2V2M9 1422 aa21.02■□□□□ 0.96
TMEM253-205ENST00000555314 DENND4BO75064 1496 aaPredicted RBP21.01■□□□□ 0.95
TMEM253-205ENST00000555314 FBXO41Q8TF61 875 aa21.01■□□□□ 0.95
TMEM253-205ENST00000555314 ARID4BQ4LE39 1312 aaPredicted RBP21■□□□□ 0.95
TMEM253-205ENST00000555314 FRMPD1Q5SYB0 1578 aa20.99■□□□□ 0.95
TMEM253-205ENST00000555314 AKNAQ7Z591 1439 aa20.98■□□□□ 0.95
TMEM253-205ENST00000555314 FANCAO15360 1455 aa20.96■□□□□ 0.95
TMEM253-205ENST00000555314 EFCAB5A4FU69 1503 aa20.96■□□□□ 0.95
TMEM253-205ENST00000555314 ARHGEF40Q8TER5 1519 aa20.94■□□□□ 0.94
TMEM253-205ENST00000555314 BCORL1Q5H9F3 1711 aa20.94■□□□□ 0.94
TMEM253-205ENST00000555314 POGZQ7Z3K3 1410 aa20.94■□□□□ 0.94
TMEM253-205ENST00000555314 MAGI2Q86UL8 1455 aa20.94■□□□□ 0.94
TMEM253-205ENST00000555314 PCF11O94913 1555 aaKnown RBP20.92■□□□□ 0.94
TMEM253-205ENST00000555314 RANGAP1P46060 587 aaPredicted RBP20.91■□□□□ 0.94
TMEM253-205ENST00000555314 ZMYM4Q5VZL5 1548 aa20.91■□□□□ 0.94
TMEM253-205ENST00000555314 CFAP74Q9C0B2 1584 aa20.91■□□□□ 0.94
TMEM253-205ENST00000555314 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.9■□□□□ 0.94
TMEM253-205ENST00000555314 LMTK3Q96Q04 1460 aa20.9■□□□□ 0.94
TMEM253-205ENST00000555314 MADDQ8WXG6 1647 aa20.89■□□□□ 0.93
TMEM253-205ENST00000555314 RICTORQ6R327 1708 aa20.87■□□□□ 0.93
TMEM253-205ENST00000555314 PLCH2O75038 1416 aa20.87■□□□□ 0.93
TMEM253-205ENST00000555314 ZFYVE16Q7Z3T8 1539 aa20.83■□□□□ 0.93
TMEM253-205ENST00000555314 CDK11AQ9UQ88 783 aaPredicted RBP20.83■□□□□ 0.93
TMEM253-205ENST00000555314 YEATS2Q9ULM3 1422 aa20.83■□□□□ 0.93
TMEM253-205ENST00000555314 TTC37Q6PGP7 1564 aa20.82■□□□□ 0.92
TMEM253-205ENST00000555314 FMN1Q68DA7 1419 aa20.82■□□□□ 0.92
TMEM253-205ENST00000555314 SCAPERQ9BY12 1400 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms