RNA–Protein interactions for RNA: ENST00000553936.5

GPHN-206, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 574 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-206ENST00000553936 KIF13AQ9H1H9 1805 aa11.97□□□□□ -0.49
GPHN-206ENST00000553936 PRG4Q92954 1404 aaPredicted RBP11.95□□□□□ -0.5
GPHN-206ENST00000553936 ABCC10Q5T3U5 1492 aa11.95□□□□□ -0.5
GPHN-206ENST00000553936 JPH4Q96JJ6 628 aa11.94□□□□□ -0.5
GPHN-206ENST00000553936 ERICH3Q5RHP9 1530 aa11.93□□□□□ -0.5
GPHN-206ENST00000553936 MAPKBP1O60336 1514 aa11.91□□□□□ -0.5
GPHN-206ENST00000553936 KDM6BO15054 1643 aa11.89□□□□□ -0.51
GPHN-206ENST00000553936 KDM4FA0A1W2PPD8 638 aa11.89□□□□□ -0.51
GPHN-206ENST00000553936 ILDR1Q86SU0 546 aaPredicted RBP11.88□□□□□ -0.51
GPHN-206ENST00000553936 DIP2BQ9P265 1576 aa11.88□□□□□ -0.51
GPHN-206ENST00000553936 TOP2BQ02880 1626 aa11.86□□□□□ -0.51
GPHN-206ENST00000553936 BIVM-ERCC5R4GMW8 1640 aa11.86□□□□□ -0.51
GPHN-206ENST00000553936 RUSC2Q8N2Y8 1516 aa11.83□□□□□ -0.52
GPHN-206ENST00000553936 ADCY10Q96PN6 1610 aa11.82□□□□□ -0.52
GPHN-206ENST00000553936 KIAA0586Q9BVV6 1533 aa11.78□□□□□ -0.52
GPHN-206ENST00000553936 TSPOAP1O95153 1857 aa11.78□□□□□ -0.52
GPHN-206ENST00000553936 SUPT5HO00267 1087 aaKnown RBP11.76□□□□□ -0.53
GPHN-206ENST00000553936 PTPRGP23470 1445 aa11.75□□□□□ -0.53
GPHN-206ENST00000553936 ADGRL1O94910 1474 aa11.74□□□□□ -0.53
GPHN-206ENST00000553936 CARMIL2Q6F5E8 1435 aa11.73□□□□□ -0.53
GPHN-206ENST00000553936 PLB1Q6P1J6 1458 aa11.73□□□□□ -0.53
GPHN-206ENST00000553936 ABCC2Q92887 1545 aa11.71□□□□□ -0.53
GPHN-206ENST00000553936 GLI2P10070 1586 aa11.71□□□□□ -0.54
GPHN-206ENST00000553936 ASXL2Q76L83 1435 aa11.7□□□□□ -0.54
GPHN-206ENST00000553936 TNIKQ9UKE5 1360 aa11.7□□□□□ -0.54
GPHN-206ENST00000553936 KIF27Q86VH2 1401 aa11.69□□□□□ -0.54
GPHN-206ENST00000553936 CUL7Q14999 1698 aa11.69□□□□□ -0.54
GPHN-206ENST00000553936 TTBK1Q5TCY1 1321 aaPredicted RBP11.69□□□□□ -0.54
GPHN-206ENST00000553936 TEX14Q8IWB6 1497 aa11.69□□□□□ -0.54
GPHN-206ENST00000553936 PPP6R1Q9UPN7 881 aa11.68□□□□□ -0.54
GPHN-206ENST00000553936 IGF1RP08069 1367 aa11.67□□□□□ -0.54
GPHN-206ENST00000553936 HECW2Q9P2P5 1572 aa11.67□□□□□ -0.54
GPHN-206ENST00000553936 UHRF1BP1LA0JNW5 1464 aa11.66□□□□□ -0.54
GPHN-206ENST00000553936 UACAQ9BZF9 1416 aa11.64□□□□□ -0.55
GPHN-206ENST00000553936 PPRC1Q5VV67 1664 aaKnown RBP11.64□□□□□ -0.55
GPHN-206ENST00000553936 EPRSP07814 1512 aaKnown RBP11.62□□□□□ -0.55
GPHN-206ENST00000553936 CARMIL1Q5VZK9 1371 aa11.62□□□□□ -0.55
GPHN-206ENST00000553936 MAP3K4Q9Y6R4 1608 aa11.6□□□□□ -0.55
GPHN-206ENST00000553936 IQGAP2Q13576 1575 aa11.6□□□□□ -0.55
GPHN-206ENST00000553936 COL17A1Q9UMD9 1497 aaPredicted RBP11.6□□□□□ -0.55
GPHN-206ENST00000553936 ADRA2BP18089 450 aa11.6□□□□□ -0.55
GPHN-206ENST00000553936 FBXO41Q8TF61 875 aa11.59□□□□□ -0.55
GPHN-206ENST00000553936 KDM5BQ9UGL1 1544 aa11.59□□□□□ -0.55
GPHN-206ENST00000553936 WDR7Q9Y4E6 1490 aa11.55□□□□□ -0.56
GPHN-206ENST00000553936 ZCCHC11Q5TAX3 1644 aaKnown RBP11.54□□□□□ -0.56
GPHN-206ENST00000553936 DISP1Q96F81 1524 aa11.54□□□□□ -0.56
GPHN-206ENST00000553936 CD109Q6YHK3 1445 aa11.52□□□□□ -0.56
GPHN-206ENST00000553936 MAGI3Q5TCQ9 1506 aa11.52□□□□□ -0.57
GPHN-206ENST00000553936 PIAS4Q8N2W9 510 aaPredicted RBP11.52□□□□□ -0.57
GPHN-206ENST00000553936 UGGT2Q9NYU1 1516 aa11.51□□□□□ -0.57
GPHN-206ENST00000553936 FAM9AQ8IZU1 332 aaPredicted RBP11.5□□□□□ -0.57
GPHN-206ENST00000553936 MSH5O43196 834 aa11.49□□□□□ -0.57
GPHN-206ENST00000553936 KIAA0556O60303 1618 aa11.49□□□□□ -0.57
GPHN-206ENST00000553936 CFAP43Q8NDM7 1665 aa11.49□□□□□ -0.57
GPHN-206ENST00000553936 KCNH8Q96L42 1107 aa11.48□□□□□ -0.57
GPHN-206ENST00000553936 RAPGEF2Q9Y4G8 1499 aa11.48□□□□□ -0.57
GPHN-206ENST00000553936 GOLGA3Q08378 1498 aa11.45□□□□□ -0.58
GPHN-206ENST00000553936 PHLDB1Q86UU1 1377 aa11.45□□□□□ -0.58
GPHN-206ENST00000553936 KIF21BO75037 1637 aa11.44□□□□□ -0.58
GPHN-206ENST00000553936 ARAP3Q8WWN8 1544 aa11.43□□□□□ -0.58
GPHN-206ENST00000553936 PTPRMP28827 1452 aa11.43□□□□□ -0.58
GPHN-206ENST00000553936 ARID4BQ4LE39 1312 aaPredicted RBP11.39□□□□□ -0.59
GPHN-206ENST00000553936 ABCA8O94911 1581 aa11.39□□□□□ -0.59
GPHN-206ENST00000553936 PCF11O94913 1555 aaKnown RBP11.38□□□□□ -0.59
GPHN-206ENST00000553936 ADAMTSL3P82987 1691 aa11.37□□□□□ -0.59
GPHN-206ENST00000553936 LMTK3Q96Q04 1460 aa11.37□□□□□ -0.59
GPHN-206ENST00000553936 CTTNBP2Q8WZ74 1663 aa11.36□□□□□ -0.59
GPHN-206ENST00000553936 NEO1Q92859 1461 aa11.35□□□□□ -0.59
GPHN-206ENST00000553936 BCORL1Q5H9F3 1711 aa11.33□□□□□ -0.6
GPHN-206ENST00000553936 RAPGEF3O95398 923 aa11.33□□□□□ -0.6
GPHN-206ENST00000553936 ABCA9Q8IUA7 1624 aa11.32□□□□□ -0.6
GPHN-206ENST00000553936 MADDQ8WXG6 1647 aa11.31□□□□□ -0.6
GPHN-206ENST00000553936 ARID3CA6NKF2 412 aa11.31□□□□□ -0.6
GPHN-206ENST00000553936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.31□□□□□ -0.6
GPHN-206ENST00000553936 HNRNPUL2Q1KMD3 747 aaKnown RBP11.31□□□□□ -0.6
GPHN-206ENST00000553936 POGZQ7Z3K3 1410 aa11.31□□□□□ -0.6
GPHN-206ENST00000553936 ATP10BO94823 1461 aa11.31□□□□□ -0.6
GPHN-206ENST00000553936 CERKQ8TCT0 537 aa11.3□□□□□ -0.6
GPHN-206ENST00000553936 FANCAO15360 1455 aa11.27□□□□□ -0.6
GPHN-206ENST00000553936 RIMS1Q86UR5 1692 aaKnown RBP11.27□□□□□ -0.61
GPHN-206ENST00000553936 DENND4BO75064 1496 aaPredicted RBP11.26□□□□□ -0.61
GPHN-206ENST00000553936 ARHGEF40Q8TER5 1519 aa11.26□□□□□ -0.61
GPHN-206ENST00000553936 HSPA2P54652 639 aa11.26□□□□□ -0.61
GPHN-206ENST00000553936 DISP3Q9P2K9 1392 aa11.26□□□□□ -0.61
GPHN-206ENST00000553936 AKNAQ7Z591 1439 aa11.26□□□□□ -0.61
GPHN-206ENST00000553936 SOCS7O14512 581 aa11.25□□□□□ -0.61
GPHN-206ENST00000553936 P3H3Q8IVL6 736 aa11.25□□□□□ -0.61
GPHN-206ENST00000553936 PRXQ9BXM0 1461 aa11.25□□□□□ -0.61
GPHN-206ENST00000553936 FRMPD1Q5SYB0 1578 aa11.24□□□□□ -0.61
GPHN-206ENST00000553936 DMRT2Q9Y5R5 561 aa11.24□□□□□ -0.61
GPHN-206ENST00000553936 PLEKHD1A6NEE1 506 aa11.23□□□□□ -0.61
GPHN-206ENST00000553936 FHOD3Q2V2M9 1422 aa11.23□□□□□ -0.61
GPHN-206ENST00000553936 CFAP74Q9C0B2 1584 aa11.23□□□□□ -0.61
GPHN-206ENST00000553936 EFCAB5A4FU69 1503 aa11.22□□□□□ -0.61
GPHN-206ENST00000553936 RAPGEF6Q8TEU7 1601 aa11.22□□□□□ -0.61
GPHN-206ENST00000553936 MAGI2Q86UL8 1455 aa11.21□□□□□ -0.61
GPHN-206ENST00000553936 ZFYVE16Q7Z3T8 1539 aa11.19□□□□□ -0.62
GPHN-206ENST00000553936 RICTORQ6R327 1708 aa11.19□□□□□ -0.62
GPHN-206ENST00000553936 MLECQ14165 292 aa11.19□□□□□ -0.62
GPHN-206ENST00000553936 ZMYM4Q5VZL5 1548 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms