RNA–Protein interactions for RNA: ENST00000553648.2

AL358334.2-201, humanhuman

TSL 2 BASIC

Gene AL358334.2, Length 4,714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL358334.2-201ENST00000553648 CLIP1P30622 1438 aa17.48■□□□□ 0.39
AL358334.2-201ENST00000553648 SCRIBQ14160 1630 aa17.48■□□□□ 0.39
AL358334.2-201ENST00000553648 ESF1Q9H501 851 aaKnown RBP17.46■□□□□ 0.39
AL358334.2-201ENST00000553648 RTN4Q9NQC3 1192 aaKnown RBP17.43■□□□□ 0.38
AL358334.2-201ENST00000553648 RGL3Q3MIN7 710 aa17.41■□□□□ 0.38
AL358334.2-201ENST00000553648 SIN3AQ96ST3 1273 aa17.39■□□□□ 0.37
AL358334.2-201ENST00000553648 LAS1LQ9Y4W2 734 aaKnown RBP17.38■□□□□ 0.37
AL358334.2-201ENST00000553648 CEP162Q5TB80 1403 aa17.35■□□□□ 0.37
AL358334.2-201ENST00000553648 BECN1Q14457 450 aa17.34■□□□□ 0.37
AL358334.2-201ENST00000553648 B4GALNT3Q6L9W6 998 aa17.33■□□□□ 0.37
AL358334.2-201ENST00000553648 TRIM44Q96DX7 344 aaPredicted RBP17.33■□□□□ 0.37
AL358334.2-201ENST00000553648 DDRGK1Q96HY6 314 aa17.33■□□□□ 0.37
AL358334.2-201ENST00000553648 PLEKHG5O94827 1062 aa17.32■□□□□ 0.36
AL358334.2-201ENST00000553648 MYH16Q9H6N6 1097 aa17.32■□□□□ 0.36
AL358334.2-201ENST00000553648 RGS3P49796 1198 aa17.31■□□□□ 0.36
AL358334.2-201ENST00000553648 NEUROD2Q15784 382 aa17.3■□□□□ 0.36
AL358334.2-201ENST00000553648 ZCCHC6Q5VYS8 1495 aaKnown RBP17.3■□□□□ 0.36
AL358334.2-201ENST00000553648 NCLP19338 710 aaKnown RBP17.29■□□□□ 0.36
AL358334.2-201ENST00000553648 NPM1P06748 294 aaKnown RBP eCLIP17.29■□□□□ 0.36
AL358334.2-201ENST00000553648 PPP4R2Q9NY27 417 aa17.28■□□□□ 0.36
AL358334.2-201ENST00000553648 TPRNQ4KMQ1 711 aa17.27■□□□□ 0.36
AL358334.2-201ENST00000553648 PPM1GO15355 546 aaPredicted RBP17.24■□□□□ 0.35
AL358334.2-201ENST00000553648 CARD11Q9BXL7 1154 aa17.23■□□□□ 0.35
AL358334.2-201ENST00000553648 NOP58Q9Y2X3 529 aaKnown RBP17.23■□□□□ 0.35
AL358334.2-201ENST00000553648 KCNH8Q96L42 1107 aa17.23■□□□□ 0.35
AL358334.2-201ENST00000553648 GOLGA6L22H0YM25 854 aa17.22■□□□□ 0.35
AL358334.2-201ENST00000553648 KNSTRNQ9Y448 316 aa17.21■□□□□ 0.35
AL358334.2-201ENST00000553648 CHMP7Q8WUX9 453 aaPredicted RBP17.19■□□□□ 0.34
AL358334.2-201ENST00000553648 FRAT1Q92837 279 aaPredicted RBP17.19■□□□□ 0.34
AL358334.2-201ENST00000553648 ERICH6BQ5W0A0 696 aa17.19■□□□□ 0.34
AL358334.2-201ENST00000553648 ZBTB7CA1YPR0 619 aa17.18■□□□□ 0.34
AL358334.2-201ENST00000553648 GOLGA3Q08378 1498 aa17.17■□□□□ 0.34
AL358334.2-201ENST00000553648 PTMAP06454 111 aaKnown RBP17.17■□□□□ 0.34
AL358334.2-201ENST00000553648 RBM19Q9Y4C8 960 aaKnown RBP17.17■□□□□ 0.34
AL358334.2-201ENST00000553648 A0A0G2JS52 829 aa17.16■□□□□ 0.34
AL358334.2-201ENST00000553648 FTSJ3Q8IY81 847 aaKnown RBP17.16■□□□□ 0.34
AL358334.2-201ENST00000553648 TNNT2P45379 298 aaPredicted RBP17.15■□□□□ 0.34
AL358334.2-201ENST00000553648 NAP1L5Q96NT1 182 aaPredicted RBP17.15■□□□□ 0.34
AL358334.2-201ENST00000553648 C14orf37Q86TY3 774 aa17.14■□□□□ 0.33
AL358334.2-201ENST00000553648 DNTTIP2Q5QJE6 756 aaKnown RBP17.14■□□□□ 0.33
AL358334.2-201ENST00000553648 RSF1Q96T23 1441 aaPredicted RBP17.13■□□□□ 0.33
AL358334.2-201ENST00000553648 PLEKHD1A6NEE1 506 aa17.13■□□□□ 0.33
AL358334.2-201ENST00000553648 CC2D1BQ5T0F9 858 aaKnown RBP17.13■□□□□ 0.33
AL358334.2-201ENST00000553648 CFDP1Q9UEE9 299 aaPredicted RBP17.13■□□□□ 0.33
AL358334.2-201ENST00000553648 CFAP53Q96M91 514 aa17.12■□□□□ 0.33
AL358334.2-201ENST00000553648 TNIKQ9UKE5 1360 aa17.11■□□□□ 0.33
AL358334.2-201ENST00000553648 DEKP35659 375 aaKnown RBP17.11■□□□□ 0.33
AL358334.2-201ENST00000553648 CCDC180Q9P1Z9 1646 aa17.1■□□□□ 0.33
AL358334.2-201ENST00000553648 PLCB2Q00722 1185 aa17.09■□□□□ 0.33
AL358334.2-201ENST00000553648 EEA1Q15075 1411 aa17.08■□□□□ 0.32
AL358334.2-201ENST00000553648 PPP1R15AO75807 674 aaPredicted RBP17.08■□□□□ 0.32
AL358334.2-201ENST00000553648 CDCA8Q53HL2 280 aa17.06■□□□□ 0.32
AL358334.2-201ENST00000553648 WRNQ14191 1432 aaPredicted RBP eCLIP17.06■□□□□ 0.32
AL358334.2-201ENST00000553648 SPRYD3Q8NCJ5 442 aa17.03■□□□□ 0.32
AL358334.2-201ENST00000553648 MAPK8IP3Q9UPT6 1336 aa17.02■□□□□ 0.31
AL358334.2-201ENST00000553648 TAOK2Q9UL54 1235 aa17.02■□□□□ 0.31
AL358334.2-201ENST00000553648 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.01■□□□□ 0.31
AL358334.2-201ENST00000553648 U2SURPO15042 1029 aaKnown RBP17.01■□□□□ 0.31
AL358334.2-201ENST00000553648 ZRSR1Q15695 479 aaKnown RBP16.99■□□□□ 0.31
AL358334.2-201ENST00000553648 DCAF11Q8TEB1 546 aa16.99■□□□□ 0.31
AL358334.2-201ENST00000553648 HSP90AB1P08238 724 aaKnown RBP16.99■□□□□ 0.31
AL358334.2-201ENST00000553648 CCNB3Q8WWL7 1395 aa16.99■□□□□ 0.31
AL358334.2-201ENST00000553648 ARID4BQ4LE39 1312 aaPredicted RBP16.98■□□□□ 0.31
AL358334.2-201ENST00000553648 CASC1Q6TDU7 716 aa16.98■□□□□ 0.31
AL358334.2-201ENST00000553648 CDK11BP21127 795 aaKnown RBP16.98■□□□□ 0.31
AL358334.2-201ENST00000553648 TSHZ2Q9NRE2 1034 aa16.97■□□□□ 0.31
AL358334.2-201ENST00000553648 NUDCQ9Y266 331 aa16.96■□□□□ 0.31
AL358334.2-201ENST00000553648 CCER2I3L3R5 266 aa16.96■□□□□ 0.31
AL358334.2-201ENST00000553648 HSPA5P11021 654 aaKnown RBP16.96■□□□□ 0.31
AL358334.2-201ENST00000553648 CEP164Q9UPV0 1460 aa16.95■□□□□ 0.3
AL358334.2-201ENST00000553648 FOXD1Q16676 465 aa16.94■□□□□ 0.3
AL358334.2-201ENST00000553648 KIF27Q86VH2 1401 aa16.93■□□□□ 0.3
AL358334.2-201ENST00000553648 POGKQ9P215 609 aa16.91■□□□□ 0.3
AL358334.2-201ENST00000553648 KANK4Q5T7N3 995 aaPredicted RBP16.91■□□□□ 0.3
AL358334.2-201ENST00000553648 SLKQ9H2G2 1235 aaPredicted RBP16.89■□□□□ 0.3
AL358334.2-201ENST00000553648 SOGA1O94964 1423 aa16.89■□□□□ 0.29
AL358334.2-201ENST00000553648 HSCBQ8IWL3 235 aa16.88■□□□□ 0.29
AL358334.2-201ENST00000553648 GZF1Q9H116 711 aaPredicted RBP16.88■□□□□ 0.29
AL358334.2-201ENST00000553648 TMF1P82094 1093 aa16.88■□□□□ 0.29
AL358334.2-201ENST00000553648 LMOD2Q6P5Q4 547 aa16.87■□□□□ 0.29
AL358334.2-201ENST00000553648 TIMELESSQ9UNS1 1208 aa16.87■□□□□ 0.29
AL358334.2-201ENST00000553648 FGD1P98174 961 aa16.87■□□□□ 0.29
AL358334.2-201ENST00000553648 KCNJ4P48050 445 aa16.86■□□□□ 0.29
AL358334.2-201ENST00000553648 SOX12O15370 315 aa16.86■□□□□ 0.29
AL358334.2-201ENST00000553648 SAFB2Q14151 953 aaKnown RBP eCLIP16.85■□□□□ 0.29
AL358334.2-201ENST00000553648 OS9Q13438 667 aaPredicted RBP16.85■□□□□ 0.29
AL358334.2-201ENST00000553648 APBB1O00213 710 aa16.84■□□□□ 0.29
AL358334.2-201ENST00000553648 TULP1O00294 542 aaPredicted RBP16.84■□□□□ 0.29
AL358334.2-201ENST00000553648 RCAN3Q9UKA8 241 aa16.84■□□□□ 0.29
AL358334.2-201ENST00000553648 NAP1L2Q9ULW6 460 aaPredicted RBP16.84■□□□□ 0.29
AL358334.2-201ENST00000553648 MS4A1P11836 297 aa16.84■□□□□ 0.29
AL358334.2-201ENST00000553648 MSNP26038 577 aaKnown RBP16.8■□□□□ 0.28
AL358334.2-201ENST00000553648 L1TD1Q5T7N2 865 aaKnown RBP16.8■□□□□ 0.28
AL358334.2-201ENST00000553648 MORC1Q86VD1 984 aa16.8■□□□□ 0.28
AL358334.2-201ENST00000553648 GOLGA6L4A6NEF3 574 aa16.8■□□□□ 0.28
AL358334.2-201ENST00000553648 SETD5Q9C0A6 1442 aa16.8■□□□□ 0.28
AL358334.2-201ENST00000553648 PKD2Q13563 968 aa16.79■□□□□ 0.28
AL358334.2-201ENST00000553648 ARID3AQ99856 593 aa16.79■□□□□ 0.28
AL358334.2-201ENST00000553648 CHMP4BQ9H444 224 aaKnown RBP16.79■□□□□ 0.28
AL358334.2-201ENST00000553648 HAP1P54257 671 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms