RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 JPH4Q96JJ6 628 aa25.36■■□□□ 1.65
PRPF39-204ENST00000553605 MAPKBP1O60336 1514 aa25.27■■□□□ 1.64
PRPF39-204ENST00000553605 DIP2BQ9P265 1576 aa25.27■■□□□ 1.64
PRPF39-204ENST00000553605 KDM6BO15054 1643 aa25.26■■□□□ 1.63
PRPF39-204ENST00000553605 ERICH3Q5RHP9 1530 aa25.25■■□□□ 1.63
PRPF39-204ENST00000553605 ADCY10Q96PN6 1610 aa25.15■■□□□ 1.62
PRPF39-204ENST00000553605 TOP2BQ02880 1626 aa25.15■■□□□ 1.62
PRPF39-204ENST00000553605 BIVM-ERCC5R4GMW8 1640 aa25.14■■□□□ 1.61
PRPF39-204ENST00000553605 TSPOAP1O95153 1857 aa25.13■■□□□ 1.61
PRPF39-204ENST00000553605 RUSC2Q8N2Y8 1516 aa25.11■■□□□ 1.61
PRPF39-204ENST00000553605 ADGRL1O94910 1474 aa24.99■■□□□ 1.59
PRPF39-204ENST00000553605 KIAA0586Q9BVV6 1533 aa24.96■■□□□ 1.59
PRPF39-204ENST00000553605 PTPRGP23470 1445 aa24.91■■□□□ 1.58
PRPF39-204ENST00000553605 SUPT5HO00267 1087 aaKnown RBP24.9■■□□□ 1.58
PRPF39-204ENST00000553605 TTBK1Q5TCY1 1321 aaPredicted RBP24.88■■□□□ 1.57
PRPF39-204ENST00000553605 HECW2Q9P2P5 1572 aa24.88■■□□□ 1.57
PRPF39-204ENST00000553605 ASXL2Q76L83 1435 aa24.86■■□□□ 1.57
PRPF39-204ENST00000553605 PPRC1Q5VV67 1664 aaKnown RBP24.85■■□□□ 1.57
PRPF39-204ENST00000553605 GLI2P10070 1586 aa24.84■■□□□ 1.57
PRPF39-204ENST00000553605 PLB1Q6P1J6 1458 aa24.84■■□□□ 1.57
PRPF39-204ENST00000553605 ABCC2Q92887 1545 aa24.84■■□□□ 1.57
PRPF39-204ENST00000553605 COL17A1Q9UMD9 1497 aaPredicted RBP24.81■■□□□ 1.56
PRPF39-204ENST00000553605 IGF1RP08069 1367 aa24.8■■□□□ 1.56
PRPF39-204ENST00000553605 TNIKQ9UKE5 1360 aa24.79■■□□□ 1.56
PRPF39-204ENST00000553605 CARMIL2Q6F5E8 1435 aa24.76■■□□□ 1.55
PRPF39-204ENST00000553605 CUL7Q14999 1698 aa24.71■■□□□ 1.55
PRPF39-204ENST00000553605 UHRF1BP1LA0JNW5 1464 aa24.7■■□□□ 1.55
PRPF39-204ENST00000553605 EPRSP07814 1512 aaKnown RBP24.69■■□□□ 1.54
PRPF39-204ENST00000553605 TEX14Q8IWB6 1497 aa24.69■■□□□ 1.54
PRPF39-204ENST00000553605 KIF27Q86VH2 1401 aa24.69■■□□□ 1.54
PRPF39-204ENST00000553605 FBXO41Q8TF61 875 aa24.68■■□□□ 1.54
PRPF39-204ENST00000553605 UACAQ9BZF9 1416 aa24.68■■□□□ 1.54
PRPF39-204ENST00000553605 MAP3K4Q9Y6R4 1608 aa24.67■■□□□ 1.54
PRPF39-204ENST00000553605 CARMIL1Q5VZK9 1371 aa24.62■■□□□ 1.53
PRPF39-204ENST00000553605 KDM5BQ9UGL1 1544 aa24.61■■□□□ 1.53
PRPF39-204ENST00000553605 IQGAP2Q13576 1575 aa24.57■■□□□ 1.52
PRPF39-204ENST00000553605 DISP1Q96F81 1524 aa24.54■■□□□ 1.52
PRPF39-204ENST00000553605 ZCCHC11Q5TAX3 1644 aaKnown RBP24.52■■□□□ 1.52
PRPF39-204ENST00000553605 WDR7Q9Y4E6 1490 aa24.46■■□□□ 1.51
PRPF39-204ENST00000553605 CD109Q6YHK3 1445 aa24.44■■□□□ 1.5
PRPF39-204ENST00000553605 MAGI3Q5TCQ9 1506 aa24.42■■□□□ 1.5
PRPF39-204ENST00000553605 KCNH8Q96L42 1107 aa24.4■■□□□ 1.5
PRPF39-204ENST00000553605 UGGT2Q9NYU1 1516 aa24.4■■□□□ 1.5
PRPF39-204ENST00000553605 KIF21BO75037 1637 aa24.37■■□□□ 1.49
PRPF39-204ENST00000553605 KIAA0556O60303 1618 aa24.35■■□□□ 1.49
PRPF39-204ENST00000553605 CFAP43Q8NDM7 1665 aa24.35■■□□□ 1.49
PRPF39-204ENST00000553605 PTPRMP28827 1452 aa24.31■■□□□ 1.48
PRPF39-204ENST00000553605 RAPGEF2Q9Y4G8 1499 aa24.28■■□□□ 1.48
PRPF39-204ENST00000553605 ARAP3Q8WWN8 1544 aa24.25■■□□□ 1.47
PRPF39-204ENST00000553605 ADAMTSL3P82987 1691 aa24.24■■□□□ 1.47
PRPF39-204ENST00000553605 LMTK3Q96Q04 1460 aa24.21■■□□□ 1.47
PRPF39-204ENST00000553605 ABCA8O94911 1581 aa24.19■■□□□ 1.46
PRPF39-204ENST00000553605 PCF11O94913 1555 aaKnown RBP24.17■■□□□ 1.46
PRPF39-204ENST00000553605 PHLDB1Q86UU1 1377 aa24.16■■□□□ 1.46
PRPF39-204ENST00000553605 GOLGA3Q08378 1498 aa24.15■■□□□ 1.46
PRPF39-204ENST00000553605 RAPGEF3O95398 923 aa24.14■■□□□ 1.45
PRPF39-204ENST00000553605 ARID4BQ4LE39 1312 aaPredicted RBP24.13■■□□□ 1.45
PRPF39-204ENST00000553605 BCORL1Q5H9F3 1711 aa24.1■■□□□ 1.45
PRPF39-204ENST00000553605 ARID3CA6NKF2 412 aa24.08■■□□□ 1.45
PRPF39-204ENST00000553605 MADDQ8WXG6 1647 aa24.08■■□□□ 1.45
PRPF39-204ENST00000553605 HSPA2P54652 639 aa24.06■■□□□ 1.44
PRPF39-204ENST00000553605 CERKQ8TCT0 537 aa24.06■■□□□ 1.44
PRPF39-204ENST00000553605 FAM9AQ8IZU1 332 aaPredicted RBP24.05■■□□□ 1.44
PRPF39-204ENST00000553605 CTTNBP2Q8WZ74 1663 aa24.05■■□□□ 1.44
PRPF39-204ENST00000553605 ATP10BO94823 1461 aa24.03■■□□□ 1.44
PRPF39-204ENST00000553605 ABCA9Q8IUA7 1624 aa24.02■■□□□ 1.44
PRPF39-204ENST00000553605 NEO1Q92859 1461 aa24.02■■□□□ 1.44
PRPF39-204ENST00000553605 SOCS7O14512 581 aa23.99■■□□□ 1.43
PRPF39-204ENST00000553605 ILDR2Q71H61 639 aa23.99■■□□□ 1.43
PRPF39-204ENST00000553605 PLPPR3Q6T4P5 718 aa23.97■■□□□ 1.43
PRPF39-204ENST00000553605 RIMS1Q86UR5 1692 aaKnown RBP23.97■■□□□ 1.43
PRPF39-204ENST00000553605 DISP3Q9P2K9 1392 aa23.97■■□□□ 1.43
PRPF39-204ENST00000553605 FRMPD1Q5SYB0 1578 aa23.95■■□□□ 1.43
PRPF39-204ENST00000553605 P3H3Q8IVL6 736 aa23.94■■□□□ 1.42
PRPF39-204ENST00000553605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.89■■□□□ 1.41
PRPF39-204ENST00000553605 HNRNPUL2Q1KMD3 747 aaKnown RBP23.89■■□□□ 1.41
PRPF39-204ENST00000553605 ARHGEF40Q8TER5 1519 aa23.88■■□□□ 1.41
PRPF39-204ENST00000553605 POGZQ7Z3K3 1410 aa23.87■■□□□ 1.41
PRPF39-204ENST00000553605 DENND4BO75064 1496 aaPredicted RBP23.86■■□□□ 1.41
PRPF39-204ENST00000553605 FANCAO15360 1455 aa23.82■■□□□ 1.4
PRPF39-204ENST00000553605 PRXQ9BXM0 1461 aa23.82■■□□□ 1.4
PRPF39-204ENST00000553605 AKNAQ7Z591 1439 aa23.82■■□□□ 1.4
PRPF39-204ENST00000553605 FHOD3Q2V2M9 1422 aa23.81■■□□□ 1.4
PRPF39-204ENST00000553605 RICTORQ6R327 1708 aa23.8■■□□□ 1.4
PRPF39-204ENST00000553605 MLECQ14165 292 aa23.79■■□□□ 1.4
PRPF39-204ENST00000553605 RAPGEF6Q8TEU7 1601 aa23.77■■□□□ 1.4
PRPF39-204ENST00000553605 PLEKHD1A6NEE1 506 aa23.74■■□□□ 1.39
PRPF39-204ENST00000553605 DMRT2Q9Y5R5 561 aa23.74■■□□□ 1.39
PRPF39-204ENST00000553605 YEATS2Q9ULM3 1422 aa23.74■■□□□ 1.39
PRPF39-204ENST00000553605 ZFYVE16Q7Z3T8 1539 aa23.73■■□□□ 1.39
PRPF39-204ENST00000553605 SIGLEC1Q9BZZ2 1709 aa23.73■■□□□ 1.39
PRPF39-204ENST00000553605 ZMYM4Q5VZL5 1548 aa23.72■■□□□ 1.39
PRPF39-204ENST00000553605 EFCAB5A4FU69 1503 aa23.71■■□□□ 1.39
PRPF39-204ENST00000553605 TTC37Q6PGP7 1564 aa23.7■■□□□ 1.38
PRPF39-204ENST00000553605 NUP153P49790 1475 aaKnown RBP23.7■■□□□ 1.38
PRPF39-204ENST00000553605 MAGI2Q86UL8 1455 aa23.7■■□□□ 1.38
PRPF39-204ENST00000553605 FER1L4A9Z1Z3 1794 aa23.7■■□□□ 1.38
PRPF39-204ENST00000553605 CFAP74Q9C0B2 1584 aa23.69■■□□□ 1.38
PRPF39-204ENST00000553605 SAMD9Q5K651 1589 aa23.69■■□□□ 1.38
PRPF39-204ENST00000553605 SPATA31D1Q6ZQQ2 1576 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms