RNA–Protein interactions for RNA: ENST00000553312.1

AL079307.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL079307.1, Length 5,982 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL079307.1-201ENST00000553312 ARID4BQ4LE39 1312 aaPredicted RBP12.01□□□□□ -0.49
AL079307.1-201ENST00000553312 WDR43Q15061 677 aaKnown RBP eCLIP11.99□□□□□ -0.49
AL079307.1-201ENST00000553312 PLCB2Q00722 1185 aa11.99□□□□□ -0.49
AL079307.1-201ENST00000553312 CHAF1AQ13111 956 aaPredicted RBP11.99□□□□□ -0.49
AL079307.1-201ENST00000553312 MSNP26038 577 aaKnown RBP11.98□□□□□ -0.49
AL079307.1-201ENST00000553312 TPRNQ4KMQ1 711 aa11.97□□□□□ -0.49
AL079307.1-201ENST00000553312 L1TD1Q5T7N2 865 aaKnown RBP11.97□□□□□ -0.49
AL079307.1-201ENST00000553312 TNNT3P45378 269 aaPredicted RBP11.96□□□□□ -0.49
AL079307.1-201ENST00000553312 GOLGA6L6A8MZA4 724 aa11.95□□□□□ -0.5
AL079307.1-201ENST00000553312 PLPPR3Q6T4P5 718 aa11.94□□□□□ -0.5
AL079307.1-201ENST00000553312 SUPT16HQ9Y5B9 1047 aaKnown RBP11.91□□□□□ -0.5
AL079307.1-201ENST00000553312 NRDCO43847 1150 aa11.91□□□□□ -0.5
AL079307.1-201ENST00000553312 ARID3AQ99856 593 aa11.91□□□□□ -0.5
AL079307.1-201ENST00000553312 PNNQ9H307 717 aaKnown RBP11.89□□□□□ -0.51
AL079307.1-201ENST00000553312 PPP4R2Q9NY27 417 aa11.89□□□□□ -0.51
AL079307.1-201ENST00000553312 SCRIBQ14160 1630 aa11.88□□□□□ -0.51
AL079307.1-201ENST00000553312 CSRNP3Q8WYN3 585 aa11.88□□□□□ -0.51
AL079307.1-201ENST00000553312 CASC1Q6TDU7 716 aa11.87□□□□□ -0.51
AL079307.1-201ENST00000553312 HSP90AB1P08238 724 aaKnown RBP11.85□□□□□ -0.51
AL079307.1-201ENST00000553312 RB1CC1Q8TDY2 1594 aa11.85□□□□□ -0.51
AL079307.1-201ENST00000553312 DCAF1Q9Y4B6 1507 aa11.84□□□□□ -0.51
AL079307.1-201ENST00000553312 RBM19Q9Y4C8 960 aaKnown RBP11.83□□□□□ -0.51
AL079307.1-201ENST00000553312 RGS3P49796 1198 aa11.83□□□□□ -0.52
AL079307.1-201ENST00000553312 VSIG10Q8N0Z9 540 aa11.82□□□□□ -0.52
AL079307.1-201ENST00000553312 STAG3Q9UJ98 1225 aa11.82□□□□□ -0.52
AL079307.1-201ENST00000553312 ZNF777Q9ULD5 760 aaPredicted RBP11.82□□□□□ -0.52
AL079307.1-201ENST00000553312 HSP90AA2PQ14568 343 aaPredicted RBP11.81□□□□□ -0.52
AL079307.1-201ENST00000553312 HIRIP3Q9BW71 556 aaPredicted RBP11.81□□□□□ -0.52
AL079307.1-201ENST00000553312 ERCC6Q03468 1493 aa11.81□□□□□ -0.52
AL079307.1-201ENST00000553312 ZBTB7CA1YPR0 619 aa11.8□□□□□ -0.52
AL079307.1-201ENST00000553312 DRC7Q8IY82 874 aa11.8□□□□□ -0.52
AL079307.1-201ENST00000553312 ARID3CA6NKF2 412 aa11.8□□□□□ -0.52
AL079307.1-201ENST00000553312 P3H3Q8IVL6 736 aa11.79□□□□□ -0.52
AL079307.1-201ENST00000553312 HSCBQ8IWL3 235 aa11.78□□□□□ -0.52
AL079307.1-201ENST00000553312 CHMP7Q8WUX9 453 aaPredicted RBP11.78□□□□□ -0.52
AL079307.1-201ENST00000553312 KIAA2012Q0VF49 1180 aa11.77□□□□□ -0.52
AL079307.1-201ENST00000553312 CHGAP10645 457 aaKnown RBP11.77□□□□□ -0.52
AL079307.1-201ENST00000553312 B4GALNT3Q6L9W6 998 aa11.77□□□□□ -0.52
AL079307.1-201ENST00000553312 TULP1O00294 542 aaPredicted RBP11.76□□□□□ -0.53
AL079307.1-201ENST00000553312 GOLGA6L4A6NEF3 574 aa11.76□□□□□ -0.53
AL079307.1-201ENST00000553312 FTSJ3Q8IY81 847 aaKnown RBP11.76□□□□□ -0.53
AL079307.1-201ENST00000553312 RSPH6AQ9H0K4 717 aa11.76□□□□□ -0.53
AL079307.1-201ENST00000553312 SENP3-EIF4A1A0A087X0R7 540 aa11.75□□□□□ -0.53
AL079307.1-201ENST00000553312 EIF4G2P78344 907 aaKnown RBP eCLIP11.75□□□□□ -0.53
AL079307.1-201ENST00000553312 TRHP20396 242 aaPredicted RBP11.74□□□□□ -0.53
AL079307.1-201ENST00000553312 SPRYD3Q8NCJ5 442 aa11.73□□□□□ -0.53
AL079307.1-201ENST00000553312 CALRP27797 417 aaKnown RBP11.72□□□□□ -0.53
AL079307.1-201ENST00000553312 GZF1Q9H116 711 aaPredicted RBP11.71□□□□□ -0.53
AL079307.1-201ENST00000553312 CCDC180Q9P1Z9 1646 aa11.71□□□□□ -0.54
AL079307.1-201ENST00000553312 KDM2AQ9Y2K7 1162 aa11.7□□□□□ -0.54
AL079307.1-201ENST00000553312 GOLGA6L3A6NEY3 463 aa11.7□□□□□ -0.54
AL079307.1-201ENST00000553312 PTMSP20962 102 aa11.7□□□□□ -0.54
AL079307.1-201ENST00000553312 TAOK2Q9UL54 1235 aa11.69□□□□□ -0.54
AL079307.1-201ENST00000553312 GOLGA6L1Q8N7Z2 621 aa11.69□□□□□ -0.54
AL079307.1-201ENST00000553312 GBP4Q96PP9 640 aa11.68□□□□□ -0.54
AL079307.1-201ENST00000553312 NOC3LQ8WTT2 800 aaKnown RBP11.68□□□□□ -0.54
AL079307.1-201ENST00000553312 FGD1P98174 961 aa11.67□□□□□ -0.54
AL079307.1-201ENST00000553312 SETQ01105 290 aaPredicted RBP11.67□□□□□ -0.54
AL079307.1-201ENST00000553312 FRAT1Q92837 279 aaPredicted RBP11.65□□□□□ -0.54
AL079307.1-201ENST00000553312 CHIC2Q9UKJ5 165 aa11.65□□□□□ -0.54
AL079307.1-201ENST00000553312 TSHZ2Q9NRE2 1034 aa11.64□□□□□ -0.55
AL079307.1-201ENST00000553312 KCNJ4P48050 445 aa11.63□□□□□ -0.55
AL079307.1-201ENST00000553312 NAP1L2Q9ULW6 460 aaPredicted RBP11.63□□□□□ -0.55
AL079307.1-201ENST00000553312 SLKQ9H2G2 1235 aaPredicted RBP11.63□□□□□ -0.55
AL079307.1-201ENST00000553312 CHMP4BQ9H444 224 aaKnown RBP11.62□□□□□ -0.55
AL079307.1-201ENST00000553312 CFAP53Q96M91 514 aa11.62□□□□□ -0.55
AL079307.1-201ENST00000553312 MCCP23508 829 aa11.6□□□□□ -0.55
AL079307.1-201ENST00000553312 SYAP1Q96A49 352 aaPredicted RBP11.6□□□□□ -0.55
AL079307.1-201ENST00000553312 IPO9Q96P70 1041 aaKnown RBP11.6□□□□□ -0.55
AL079307.1-201ENST00000553312 A0A0U1RQG5 324 aaPredicted RBP11.6□□□□□ -0.55
AL079307.1-201ENST00000553312 MS4A1P11836 297 aa11.6□□□□□ -0.55
AL079307.1-201ENST00000553312 ZNF771Q7L3S4 317 aaPredicted RBP11.6□□□□□ -0.55
AL079307.1-201ENST00000553312 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.6□□□□□ -0.55
AL079307.1-201ENST00000553312 NEUROD2Q15784 382 aa11.6□□□□□ -0.55
AL079307.1-201ENST00000553312 TIMELESSQ9UNS1 1208 aa11.58□□□□□ -0.56
AL079307.1-201ENST00000553312 USP35Q9P2H5 1018 aa11.58□□□□□ -0.56
AL079307.1-201ENST00000553312 KNSTRNQ9Y448 316 aa11.57□□□□□ -0.56
AL079307.1-201ENST00000553312 NACADO15069 1562 aa11.56□□□□□ -0.56
AL079307.1-201ENST00000553312 CFAP44Q96MT7 982 aa11.56□□□□□ -0.56
AL079307.1-201ENST00000553312 PKNOX2Q96KN3 472 aa11.56□□□□□ -0.56
AL079307.1-201ENST00000553312 OS9Q13438 667 aaPredicted RBP11.56□□□□□ -0.56
AL079307.1-201ENST00000553312 A0A0G2JS52 829 aa11.55□□□□□ -0.56
AL079307.1-201ENST00000553312 TCERG1O14776 1098 aaKnown RBP11.55□□□□□ -0.56
AL079307.1-201ENST00000553312 MAPK8IP3Q9UPT6 1336 aa11.55□□□□□ -0.56
AL079307.1-201ENST00000553312 NCBP3Q53F19 620 aaKnown RBP11.54□□□□□ -0.56
AL079307.1-201ENST00000553312 APPP05067 770 aa11.54□□□□□ -0.56
AL079307.1-201ENST00000553312 TPM4P67936 248 aa11.54□□□□□ -0.56
AL079307.1-201ENST00000553312 C14orf37Q86TY3 774 aa11.54□□□□□ -0.56
AL079307.1-201ENST00000553312 CALD1Q05682 793 aaKnown RBP11.53□□□□□ -0.56
AL079307.1-201ENST00000553312 CLSTN1O94985 981 aa11.53□□□□□ -0.56
AL079307.1-201ENST00000553312 PODXL2Q9NZ53 605 aa11.52□□□□□ -0.57
AL079307.1-201ENST00000553312 GSE1Q14687 1217 aa11.51□□□□□ -0.57
AL079307.1-201ENST00000553312 HTATSF1O43719 755 aaKnown RBP11.51□□□□□ -0.57
AL079307.1-201ENST00000553312 GNL2Q13823 731 aaKnown RBP11.51□□□□□ -0.57
AL079307.1-201ENST00000553312 AEBP2Q6ZN18 517 aaPredicted RBP11.51□□□□□ -0.57
AL079307.1-201ENST00000553312 CDCA8Q53HL2 280 aa11.5□□□□□ -0.57
AL079307.1-201ENST00000553312 KCNH8Q96L42 1107 aa11.49□□□□□ -0.57
AL079307.1-201ENST00000553312 FAM13BQ9NYF5 915 aa11.49□□□□□ -0.57
AL079307.1-201ENST00000553312 PPP1R15AO75807 674 aaPredicted RBP11.48□□□□□ -0.57
AL079307.1-201ENST00000553312 NUDCQ9Y266 331 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms