RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 FHAD1B1AJZ9 1412 aa22.06■■□□□ 1.12
SNRPF-205ENST00000553192 JPH4Q96JJ6 628 aa22.04■■□□□ 1.12
SNRPF-205ENST00000553192 NPM1P06748 294 aaKnown RBP eCLIP22.03■■□□□ 1.12
SNRPF-205ENST00000553192 ADCY10Q96PN6 1610 aa21.97■■□□□ 1.11
SNRPF-205ENST00000553192 ADGRL1O94910 1474 aa21.96■■□□□ 1.11
SNRPF-205ENST00000553192 HECW2Q9P2P5 1572 aa21.95■■□□□ 1.1
SNRPF-205ENST00000553192 WRNQ14191 1432 aaPredicted RBP eCLIP21.93■■□□□ 1.1
SNRPF-205ENST00000553192 TSPOAP1O95153 1857 aa21.92■■□□□ 1.1
SNRPF-205ENST00000553192 ERICH3Q5RHP9 1530 aa21.89■■□□□ 1.09
SNRPF-205ENST00000553192 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
SNRPF-205ENST00000553192 COL17A1Q9UMD9 1497 aaPredicted RBP21.79■■□□□ 1.08
SNRPF-205ENST00000553192 FBXO41Q8TF61 875 aa21.79■■□□□ 1.08
SNRPF-205ENST00000553192 PPRC1Q5VV67 1664 aaKnown RBP21.76■■□□□ 1.07
SNRPF-205ENST00000553192 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
SNRPF-205ENST00000553192 BIVM-ERCC5R4GMW8 1640 aa21.72■■□□□ 1.07
SNRPF-205ENST00000553192 GLI2P10070 1586 aa21.7■■□□□ 1.06
SNRPF-205ENST00000553192 ASXL2Q76L83 1435 aa21.67■■□□□ 1.06
SNRPF-205ENST00000553192 KIAA0586Q9BVV6 1533 aa21.66■■□□□ 1.06
SNRPF-205ENST00000553192 PTPRGP23470 1445 aa21.64■■□□□ 1.06
SNRPF-205ENST00000553192 ABCC2Q92887 1545 aa21.64■■□□□ 1.05
SNRPF-205ENST00000553192 PLB1Q6P1J6 1458 aa21.64■■□□□ 1.05
SNRPF-205ENST00000553192 TTBK1Q5TCY1 1321 aaPredicted RBP21.57■■□□□ 1.04
SNRPF-205ENST00000553192 EPRSP07814 1512 aaKnown RBP21.55■■□□□ 1.04
SNRPF-205ENST00000553192 TNIKQ9UKE5 1360 aa21.52■■□□□ 1.04
SNRPF-205ENST00000553192 MAP3K4Q9Y6R4 1608 aa21.52■■□□□ 1.04
SNRPF-205ENST00000553192 UHRF1BP1LA0JNW5 1464 aa21.5■■□□□ 1.03
SNRPF-205ENST00000553192 TEX14Q8IWB6 1497 aa21.5■■□□□ 1.03
SNRPF-205ENST00000553192 IGF1RP08069 1367 aa21.48■■□□□ 1.03
SNRPF-205ENST00000553192 CUL7Q14999 1698 aa21.47■■□□□ 1.03
SNRPF-205ENST00000553192 LMTK3Q96Q04 1460 aa21.45■■□□□ 1.03
SNRPF-205ENST00000553192 UACAQ9BZF9 1416 aa21.45■■□□□ 1.02
SNRPF-205ENST00000553192 CARMIL2Q6F5E8 1435 aa21.43■■□□□ 1.02
SNRPF-205ENST00000553192 KDM5BQ9UGL1 1544 aa21.43■■□□□ 1.02
SNRPF-205ENST00000553192 DISP1Q96F81 1524 aa21.34■■□□□ 1.01
SNRPF-205ENST00000553192 ILDR2Q71H61 639 aa21.33■■□□□ 1.01
SNRPF-205ENST00000553192 KIF21BO75037 1637 aa21.32■■□□□ 1
SNRPF-205ENST00000553192 ZCCHC11Q5TAX3 1644 aaKnown RBP21.32■■□□□ 1
SNRPF-205ENST00000553192 PTPRMP28827 1452 aa21.31■■□□□ 1
SNRPF-205ENST00000553192 KIF27Q86VH2 1401 aa21.29■■□□□ 1
SNRPF-205ENST00000553192 MAGI3Q5TCQ9 1506 aa21.29■■□□□ 1
SNRPF-205ENST00000553192 WDR7Q9Y4E6 1490 aa21.29■■□□□ 1
SNRPF-205ENST00000553192 SOCS7O14512 581 aa21.28■■□□□ 1
SNRPF-205ENST00000553192 IQGAP2Q13576 1575 aa21.27■■□□□ 1
SNRPF-205ENST00000553192 CARMIL1Q5VZK9 1371 aa21.27■■□□□ 1
SNRPF-205ENST00000553192 CD109Q6YHK3 1445 aa21.27■■□□□ 1
SNRPF-205ENST00000553192 SUPT5HO00267 1087 aaKnown RBP21.26■□□□□ 0.99
SNRPF-205ENST00000553192 ADAMTSL3P82987 1691 aa21.23■□□□□ 0.99
SNRPF-205ENST00000553192 PCF11O94913 1555 aaKnown RBP21.23■□□□□ 0.99
SNRPF-205ENST00000553192 KCNH8Q96L42 1107 aa21.17■□□□□ 0.98
SNRPF-205ENST00000553192 DISP3Q9P2K9 1392 aa21.17■□□□□ 0.98
SNRPF-205ENST00000553192 CFAP43Q8NDM7 1665 aa21.17■□□□□ 0.98
SNRPF-205ENST00000553192 ARAP3Q8WWN8 1544 aa21.15■□□□□ 0.98
SNRPF-205ENST00000553192 UGGT2Q9NYU1 1516 aa21.15■□□□□ 0.98
SNRPF-205ENST00000553192 CERKQ8TCT0 537 aa21.15■□□□□ 0.98
SNRPF-205ENST00000553192 KIAA0556O60303 1618 aa21.12■□□□□ 0.97
SNRPF-205ENST00000553192 HSPA2P54652 639 aa21.11■□□□□ 0.97
SNRPF-205ENST00000553192 MADDQ8WXG6 1647 aa21.07■□□□□ 0.96
SNRPF-205ENST00000553192 BCORL1Q5H9F3 1711 aa21.06■□□□□ 0.96
SNRPF-205ENST00000553192 RAPGEF3O95398 923 aa21.04■□□□□ 0.96
SNRPF-205ENST00000553192 ABCA8O94911 1581 aa21.02■□□□□ 0.95
SNRPF-205ENST00000553192 ARID4BQ4LE39 1312 aaPredicted RBP20.99■□□□□ 0.95
SNRPF-205ENST00000553192 PHLDB1Q86UU1 1377 aa20.97■□□□□ 0.95
SNRPF-205ENST00000553192 RAPGEF2Q9Y4G8 1499 aa20.95■□□□□ 0.94
SNRPF-205ENST00000553192 FRMPD1Q5SYB0 1578 aa20.93■□□□□ 0.94
SNRPF-205ENST00000553192 RIMS1Q86UR5 1692 aaKnown RBP20.93■□□□□ 0.94
SNRPF-205ENST00000553192 SPATA31D1Q6ZQQ2 1576 aa20.9■□□□□ 0.94
SNRPF-205ENST00000553192 PLPPR3Q6T4P5 718 aa20.9■□□□□ 0.94
SNRPF-205ENST00000553192 ABCA9Q8IUA7 1624 aa20.89■□□□□ 0.93
SNRPF-205ENST00000553192 NEO1Q92859 1461 aa20.88■□□□□ 0.93
SNRPF-205ENST00000553192 ARID3CA6NKF2 412 aa20.88■□□□□ 0.93
SNRPF-205ENST00000553192 ATP10BO94823 1461 aa20.87■□□□□ 0.93
SNRPF-205ENST00000553192 GOLGA3Q08378 1498 aa20.84■□□□□ 0.93
SNRPF-205ENST00000553192 ARHGEF40Q8TER5 1519 aa20.83■□□□□ 0.93
SNRPF-205ENST00000553192 SIGLEC1Q9BZZ2 1709 aa20.77■□□□□ 0.92
SNRPF-205ENST00000553192 YEATS2Q9ULM3 1422 aa20.76■□□□□ 0.91
SNRPF-205ENST00000553192 POGZQ7Z3K3 1410 aa20.75■□□□□ 0.91
SNRPF-205ENST00000553192 FHOD3Q2V2M9 1422 aa20.74■□□□□ 0.91
SNRPF-205ENST00000553192 DENND4BO75064 1496 aaPredicted RBP20.74■□□□□ 0.91
SNRPF-205ENST00000553192 FANCAO15360 1455 aa20.73■□□□□ 0.91
SNRPF-205ENST00000553192 CTTNBP2Q8WZ74 1663 aa20.73■□□□□ 0.91
SNRPF-205ENST00000553192 RICTORQ6R327 1708 aa20.72■□□□□ 0.91
SNRPF-205ENST00000553192 TTC37Q6PGP7 1564 aa20.72■□□□□ 0.91
SNRPF-205ENST00000553192 AKNAQ7Z591 1439 aa20.71■□□□□ 0.91
SNRPF-205ENST00000553192 MLECQ14165 292 aa20.71■□□□□ 0.91
SNRPF-205ENST00000553192 STRCQ7RTU9 1775 aa20.69■□□□□ 0.9
SNRPF-205ENST00000553192 DMRT2Q9Y5R5 561 aa20.69■□□□□ 0.9
SNRPF-205ENST00000553192 P3H3Q8IVL6 736 aa20.67■□□□□ 0.9
SNRPF-205ENST00000553192 CEBPAP49715 358 aaPredicted RBP20.66■□□□□ 0.9
SNRPF-205ENST00000553192 ZMYM4Q5VZL5 1548 aa20.66■□□□□ 0.9
SNRPF-205ENST00000553192 ZFYVE16Q7Z3T8 1539 aa20.65■□□□□ 0.9
SNRPF-205ENST00000553192 PREX1Q8TCU6 1659 aa20.64■□□□□ 0.89
SNRPF-205ENST00000553192 FER1L4A9Z1Z3 1794 aa20.63■□□□□ 0.89
SNRPF-205ENST00000553192 ARHGEF12Q9NZN5 1544 aa20.63■□□□□ 0.89
SNRPF-205ENST00000553192 LTBP4Q8N2S1 1624 aa20.62■□□□□ 0.89
SNRPF-205ENST00000553192 EFCAB5A4FU69 1503 aa20.61■□□□□ 0.89
SNRPF-205ENST00000553192 PTPRTO14522 1441 aa20.61■□□□□ 0.89
SNRPF-205ENST00000553192 MAGI2Q86UL8 1455 aa20.6■□□□□ 0.89
SNRPF-205ENST00000553192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.59■□□□□ 0.89
SNRPF-205ENST00000553192 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
SNRPF-205ENST00000553192 HECW1Q76N89 1606 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms