RNA–Protein interactions for RNA: ENST00000552495.1

RITA1-203, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

TSL 2 BASIC

Gene RITA1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-203ENST00000552495 AQRO60306 1485 aaKnown RBP eCLIP35.64■■■■□ 3.3
RITA1-203ENST00000552495 GRIN2BQ13224 1484 aa35.61■■■■□ 3.29
RITA1-203ENST00000552495 THOC2Q8NI27 1593 aaKnown RBP35.6■■■■□ 3.29
RITA1-203ENST00000552495 FHAD1B1AJZ9 1412 aa35.6■■■■□ 3.29
RITA1-203ENST00000552495 ADAMTS12P58397 1594 aa35.53■■■■□ 3.28
RITA1-203ENST00000552495 MAP3K1Q13233 1512 aa35.52■■■■□ 3.28
RITA1-203ENST00000552495 ZNF608Q9ULD9 1512 aaPredicted RBP35.52■■■■□ 3.28
RITA1-203ENST00000552495 KANK4Q5T7N3 995 aaPredicted RBP35.49■■■■□ 3.27
RITA1-203ENST00000552495 P3H3Q8IVL6 736 aa35.46■■■■□ 3.27
RITA1-203ENST00000552495 FHOD3Q2V2M9 1422 aa35.45■■■■□ 3.27
RITA1-203ENST00000552495 TIAM1Q13009 1591 aa35.42■■■■□ 3.26
RITA1-203ENST00000552495 SAMD9Q5K651 1589 aa35.41■■■■□ 3.26
RITA1-203ENST00000552495 EIF4G3O43432 1585 aaKnown RBP35.4■■■■□ 3.26
RITA1-203ENST00000552495 FMN1Q68DA7 1419 aa35.38■■■■□ 3.25
RITA1-203ENST00000552495 PCF11O94913 1555 aaKnown RBP35.38■■■■□ 3.25
RITA1-203ENST00000552495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.37■■■■□ 3.25
RITA1-203ENST00000552495 FYCO1Q9BQS8 1478 aa35.36■■■■□ 3.25
RITA1-203ENST00000552495 CCER1Q8TC90 406 aaPredicted RBP35.35■■■■□ 3.25
RITA1-203ENST00000552495 CASKIN1Q8WXD9 1431 aa35.34■■■■□ 3.25
RITA1-203ENST00000552495 SNAPC4Q5SXM2 1469 aa35.3■■■■□ 3.24
RITA1-203ENST00000552495 CFAP43Q8NDM7 1665 aa35.29■■■■□ 3.24
RITA1-203ENST00000552495 IQGAP2Q13576 1575 aa35.28■■■■□ 3.24
RITA1-203ENST00000552495 LRRC9Q6ZRR7 1453 aa35.27■■■■□ 3.24
RITA1-203ENST00000552495 HNRNPUL2Q1KMD3 747 aaKnown RBP35.27■■■■□ 3.24
RITA1-203ENST00000552495 RRBP1Q9P2E9 1410 aaKnown RBP35.26■■■■□ 3.23
RITA1-203ENST00000552495 MAGI1Q96QZ7 1491 aaPredicted RBP35.24■■■■□ 3.23
RITA1-203ENST00000552495 ATP1B4Q9UN42 357 aaPredicted RBP35.21■■■■□ 3.23
RITA1-203ENST00000552495 GRIN2AQ12879 1464 aa35.17■■■■□ 3.22
RITA1-203ENST00000552495 KIAA0586Q9BVV6 1533 aa35.13■■■■□ 3.22
RITA1-203ENST00000552495 CCNB3Q8WWL7 1395 aa35.13■■■■□ 3.21
RITA1-203ENST00000552495 UGGT2Q9NYU1 1516 aa35.12■■■■□ 3.21
RITA1-203ENST00000552495 SYNJ2O15056 1496 aa35.11■■■■□ 3.21
RITA1-203ENST00000552495 CHMP7Q8WUX9 453 aaPredicted RBP35.05■■■■□ 3.2
RITA1-203ENST00000552495 PHLDB1Q86UU1 1377 aa34.97■■■■□ 3.19
RITA1-203ENST00000552495 CCDC18Q5T9S5 1454 aa34.93■■■■□ 3.18
RITA1-203ENST00000552495 LRRIQ1Q96JM4 1722 aa34.93■■■■□ 3.18
RITA1-203ENST00000552495 MTUS2Q5JR59 1369 aa34.91■■■■□ 3.18
RITA1-203ENST00000552495 CEP170Q5SW79 1584 aa34.91■■■■□ 3.18
RITA1-203ENST00000552495 HECW1Q76N89 1606 aa34.91■■■■□ 3.18
RITA1-203ENST00000552495 KIAA0556O60303 1618 aa34.9■■■■□ 3.18
RITA1-203ENST00000552495 FBLN2P98095 1184 aa34.9■■■■□ 3.18
RITA1-203ENST00000552495 DISP1Q96F81 1524 aa34.89■■■■□ 3.18
RITA1-203ENST00000552495 NUP160Q12769 1436 aa34.87■■■■□ 3.17
RITA1-203ENST00000552495 EHBP1L1Q8N3D4 1523 aa34.82■■■■□ 3.16
RITA1-203ENST00000552495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.78■■■■□ 3.16
RITA1-203ENST00000552495 EPRSP07814 1512 aaKnown RBP34.77■■■■□ 3.16
RITA1-203ENST00000552495 SUPT6HQ7KZ85 1726 aaKnown RBP34.75■■■■□ 3.15
RITA1-203ENST00000552495 ITGAEP38570 1179 aa34.75■■■■□ 3.15
RITA1-203ENST00000552495 FAM50AQ14320 339 aaKnown RBP34.73■■■■□ 3.15
RITA1-203ENST00000552495 NCOA2Q15596 1464 aa34.72■■■■□ 3.15
RITA1-203ENST00000552495 CARMIL2Q6F5E8 1435 aa34.71■■■■□ 3.15
RITA1-203ENST00000552495 FGD6Q6ZV73 1430 aa34.7■■■■□ 3.15
RITA1-203ENST00000552495 JPH4Q96JJ6 628 aa34.69■■■■□ 3.14
RITA1-203ENST00000552495 CLSPNQ9HAW4 1339 aa34.67■■■■□ 3.14
RITA1-203ENST00000552495 MAGI3Q5TCQ9 1506 aa34.65■■■■□ 3.14
RITA1-203ENST00000552495 RAPGEF6Q8TEU7 1601 aa34.64■■■■□ 3.14
RITA1-203ENST00000552495 MYOM3Q5VTT5 1437 aa34.63■■■■□ 3.13
RITA1-203ENST00000552495 DHX57Q6P158 1386 aaKnown RBP34.62■■■■□ 3.13
RITA1-203ENST00000552495 ARHGEF11O15085 1522 aa34.62■■■■□ 3.13
RITA1-203ENST00000552495 CDK13Q14004 1512 aaKnown RBP34.62■■■■□ 3.13
RITA1-203ENST00000552495 NUP153P49790 1475 aaKnown RBP34.57■■■■□ 3.13
RITA1-203ENST00000552495 SETD5Q9C0A6 1442 aa34.56■■■■□ 3.12
RITA1-203ENST00000552495 RAB3GAP2Q9H2M9 1393 aa34.54■■■■□ 3.12
RITA1-203ENST00000552495 CHD1O14646 1710 aa34.51■■■■□ 3.12
RITA1-203ENST00000552495 CDK11AQ9UQ88 783 aaPredicted RBP34.49■■■■□ 3.11
RITA1-203ENST00000552495 ARID3CA6NKF2 412 aa34.48■■■■□ 3.11
RITA1-203ENST00000552495 PLB1Q6P1J6 1458 aa34.45■■■■□ 3.11
RITA1-203ENST00000552495 PTPN23Q9H3S7 1636 aa34.45■■■■□ 3.11
RITA1-203ENST00000552495 MIA2Q96PC5 1412 aa34.41■■■■□ 3.1
RITA1-203ENST00000552495 TCOF1Q13428 1488 aaKnown RBP34.4■■■■□ 3.1
RITA1-203ENST00000552495 PRG4Q92954 1404 aaPredicted RBP34.39■■■■□ 3.1
RITA1-203ENST00000552495 ABCA8O94911 1581 aa34.36■■■■□ 3.09
RITA1-203ENST00000552495 TROQ12816 1431 aaPredicted RBP34.32■■■■□ 3.08
RITA1-203ENST00000552495 SHROOM2Q13796 1616 aa34.3■■■■□ 3.08
RITA1-203ENST00000552495 PTPRKQ15262 1439 aa34.3■■■■□ 3.08
RITA1-203ENST00000552495 HFM1A2PYH4 1435 aa34.28■■■■□ 3.08
RITA1-203ENST00000552495 PTPRGP23470 1445 aa34.27■■■■□ 3.08
RITA1-203ENST00000552495 ADCY10Q96PN6 1610 aa34.21■■■■□ 3.07
RITA1-203ENST00000552495 MAPKBP1O60336 1514 aa34.2■■■■□ 3.06
RITA1-203ENST00000552495 ATP10BO94823 1461 aa34.17■■■■□ 3.06
RITA1-203ENST00000552495 NAIPQ13075 1403 aa34.16■■■■□ 3.06
RITA1-203ENST00000552495 PLEKHD1A6NEE1 506 aa34.15■■■■□ 3.06
RITA1-203ENST00000552495 ZNF316A6NFI3 1004 aaPredicted RBP34.15■■■■□ 3.06
RITA1-203ENST00000552495 AKNAQ7Z591 1439 aa34.13■■■■□ 3.05
RITA1-203ENST00000552495 ITSN2Q9NZM3 1697 aa34.13■■■■□ 3.05
RITA1-203ENST00000552495 CLASP1Q7Z460 1538 aa34.11■■■■□ 3.05
RITA1-203ENST00000552495 KIF14Q15058 1648 aa34.09■■■■□ 3.05
RITA1-203ENST00000552495 UACAQ9BZF9 1416 aa34.08■■■■□ 3.05
RITA1-203ENST00000552495 GPATCH8Q9UKJ3 1502 aaKnown RBP34.05■■■■□ 3.04
RITA1-203ENST00000552495 GCC2Q8IWJ2 1684 aa34.05■■■■□ 3.04
RITA1-203ENST00000552495 DNMT1P26358 1616 aaKnown RBP34.03■■■■□ 3.04
RITA1-203ENST00000552495 CFDP1Q9UEE9 299 aaPredicted RBP34.03■■■■□ 3.04
RITA1-203ENST00000552495 DAPK1P53355 1430 aa34.03■■■■□ 3.04
RITA1-203ENST00000552495 CHIC2Q9UKJ5 165 aa34.02■■■■□ 3.04
RITA1-203ENST00000552495 ERCC6L2Q5T890 1561 aa34■■■■□ 3.03
RITA1-203ENST00000552495 ROCK1Q13464 1354 aa33.99■■■■□ 3.03
RITA1-203ENST00000552495 RRP7BPQ9NSQ0 103 aa33.99■■■■□ 3.03
RITA1-203ENST00000552495 DIEXFQ68CQ4 756 aaKnown RBP33.98■■■■□ 3.03
RITA1-203ENST00000552495 ABCC5O15440 1437 aa33.97■■■■□ 3.03
RITA1-203ENST00000552495 CAMSAP2Q08AD1 1489 aa33.97■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms